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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2839182..2841106- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010254-T1 ID=KJC3_010254-T1|Name=KJC3_010254-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1925bp|location=Sequence derived from alignment at ch7:2839182..2841106- (Aspergillus niger KJC3)
CCAATAGGGCGGAAAGACTCATGTGACCCGCCCGCCGATAAGAATCGGAT
TCTTCATTGCCGGCGAATCTTCATCAACCTCTTTATCTCAGAAAGCTCGG
GTTCCTGAGTGCAGACAGCATCACCATGACTAGTGACGACCAGTTTTTCT
TCGACTACGTGAGTTGGTAGCATGCGCCCTCTGCTTGCCACCTTTGTACT
GACGCTTTCCTGTTCCCCAGCTTGCCTCGATACCGCATGACGTAAGGAGA
TATTCCCTCCAAGTCGCCGAGTCGATCGACCGACAAGTGGACCACGCAGC
CAACGCACTCCGCGATACCCTCTCTAGCCAGTCATGGCTACCCACCTCCG
TTCGGCCCGTATCCAGAAATCGACCCAGTCCGCCTACACCGCGAGGACTT
GTTGATCGCGTGCACAGTTGGGTCTTGCGCAACCGAGCATGGAGCGCCGC
CCTTATCGCCTTCTTGGGCACCAGCTGTGTGCTGTACTATGGGAATAAGA
AGCTGAATGGAAAGCGACGGAGAGCTAGGCGAGCTGGAAATGGAGCCCGG
AAGGAAATAGTGGGTATGTAAACTTCCCACTTCTCTTATACTTCGCAGTC
TGATATATGCGACAGTCGTCGCCGGGTCGCCCCATGAGCCGATGACCAGA
GCGATCGCCGCCGATCTGGAACGTCGAGGATACATAGTCTACGTGACAGT
CACGTCCGCAGAGGAGGAGCACATCGTGCAGTCGGACAATCGAGCAGATA
TCAAAGCCCTTTGGTTGGATCTCTCGGCCGTAAGCGCAATAAATCTCGCA
GGAATCTCGCGTCAAACTGACAATATCGATTTGAACAGACACCCTCCTCA
CCATCCGAAATACACCCCTCCTTGAATGAGATCTACTCCCTCATTTCTCG
ACCTCAGTCGCCGATGGCCGGTGTGCCCCCGCACACCTGCCAACTGAGCG
GCCTCATCCTCGTACCCTCTCCAAACTACGCCTCCGGCCCCGTGGCTACA
ATCCCACCCTCCTCCTGGATCGACACCGTCAACACCCGTCTTCTCTCCCC
TATTCTTACAACCCAGATCTTCCTCCCTCTCCTCACCCTCCGTAACACCA
ACAGCACCATCGTCGTCGCCTACCCGTCCATCTCCTCATCCCTCTCCGCA
CCCTTTACCGGACCCGAAGTCGCAACAACTCGCGCACTGTCAGGGTTCGC
AACTTCCCTGCGCAGAGAACTCAGCCTCCTACAACAAAACAACATCGACG
TCGTGGAACTCAAGCTCGGTAACATAGACCTAGGCCCACAGTACCGCAAC
GCTCAGAGTCACATCACCGGTACGGAAGTCCTCGCCTGGAGTGTGCAACA
GCGATCCCTGTACGCCTCGCAGTATCTCAACAGCATCGAGCAACGACCTG
CCGCGTCCGCAGGGCCCAGCACGATCCGCGGATCACCGGCCCGGGCTCTA
CACTACGCTGTCCTGGACGCACTGGACCCGCCATCGAAGGATATCTTCGG
CAGAAAGGTGGCCAAGAACCCCGTCATCTATGTTGGTCGGGGGGCACGGT
CGTACCATTTCATTGGCGAGTGGGTTCCCGCTGGACTGGTAGGCTGGATG
CTGGGGTTGCGGACCGGACAGCAGACACCCGCGGAGAATGGAAGCGGGGG
GAGTAGCGAGACGAGCTGGGAGAAGGTTTAATGGATTAAGCATATTAATG
ATGGGGGTCTTTGATACGGAGTAGTGTGAAATGATATCATCTCTTCTCTT
TCTCTTTTCTAACGCGTCATATTGACATTTCTTCTTGACGGCCTCTCTTC
TTCTTCACAGTAAGTAGGTATATGAGGGATTTCAATTGAACTAACTGTAT
GTAACTTATCCGTGGTCAAAGTGATAGTCATCTGTATCTGTATAATACAG
TAAACTCATATTTATTAGTATAATT back to topCoding sequence (CDS) from alignment at ch7:2839182..2841106- >KJC3_010254-T1 ID=KJC3_010254-T1|Name=KJC3_010254-T1|organism=Aspergillus niger KJC3|type=CDS|length=5532bp|location=Sequence derived from alignment at ch7:2839182..2841106- (Aspergillus niger KJC3)
ACACCCTCCTCACCATCCGAAATACACCCCTCCTTGAATGAGATCTACTC
CCTCATTTCTCGACCTCAGTCGCCGATGGCCGGTGTGCCCCCGCACACCT
GCCAACTGAGCGGCCTCATCCTCGTACCCTCTCCAAACTACGCCTCCGGC
CCCGTGGCTACAATCCCACCCTCCTCCTGGATCGACACCGTCAACACCCG
TCTTCTCTCCCCTATTCTTACAACCCAGATCTTCCTCCCTCTCCTCACCC
TCCGTAACACCAACAGCACCATCGTCGTCGCCTACCCGTCCATCTCCTCA
TCCCTCTCCGCACCCTTTACCGGACCCGAAGTCGCAACAACTCGCGCACT
GTCAGGGTTCGCAACTTCCCTGCGCAGAGAACTCAGCCTCCTACAACAAA
ACAACATCGACGTCGTGGAACTCAAGCTCGGTAACATAGACCTAGGCCCA
CAGTACCGCAACGCTCAGAGTCACATCACCGGTACGGAAGTCCTCGCCTG
GAGTGTGCAACAGCGATCCCTGTACGCCTCGCAGTATCTCAACAGCATCG
AGCAACGACCTGCCGCGTCCGCAGGGCCCAGCACGATCCGCGGATCACCG
GCCCGGGCTCTACACTACGCTGTCCTGGACGCACTGGACCCGCCATCGAA
GGATATCTTCGGCAGAAAGGTGGCCAAGAACCCCGTCATCTATGTTGGTC
GGGGGGCACGGTCGTACCATTTCATTGGCGAGTGGGTTCCCGCTGGACTG
GTAGGCTGGATGCTGGGGTTGCGGACCGGACAGCAGACACCCGCGGAGAA
TGGAAGCGGGGGGAGTAGCGAGACGAGCTGGGAGAAGGTTTAATCGTCGC
CGGGTCGCCCCATGAGCCGATGACCAGAGCGATCGCCGCCGATCTGGAAC
GTCGAGGATACATAGTCTACGTGACAGTCACGTCCGCAGAGGAGGAGCAC
ATCGTGCAGTCGGACAATCGAGCAGATATCAAAGCCCTTTGGTTGGATCT
CTCGGCCCTTGCCTCGATACCGCATGACGTAAGGAGATATTCCCTCCAAG
TCGCCGAGTCGATCGACCGACAAGTGGACCACGCAGCCAACGCACTCCGC
GATACCCTCTCTAGCCAGTCATGGCTACCCACCTCCGTTCGGCCCGTATC
CAGAAATCGACCCAGTCCGCCTACACCGCGAGGACTTGTTGATCGCGTGC
ACAGTTGGGTCTTGCGCAACCGAGCATGGAGCGCCGCCCTTATCGCCTTC
TTGGGCACCAGCTGTGTGCTGTACTATGGGAATAAGAAGCTGAATGGAAA
GCGACGGAGAGCTAGGCGAGCTGGAAATGGAGCCCGGAAGGAAATAGTGG
ATGACTAGTGACGACCAGTTTTTCTTCGACTACACACCCTCCTCACCATC
CGAAATACACCCCTCCTTGAATGAGATCTACTCCCTCATTTCTCGACCTC
AGTCGCCGATGGCCGGTGTGCCCCCGCACACCTGCCAACTGAGCGGCCTC
ATCCTCGTACCCTCTCCAAACTACGCCTCCGGCCCCGTGGCTACAATCCC
ACCCTCCTCCTGGATCGACACCGTCAACACCCGTCTTCTCTCCCCTATTC
TTACAACCCAGATCTTCCTCCCTCTCCTCACCCTCCGTAACACCAACAGC
ACCATCGTCGTCGCCTACCCGTCCATCTCCTCATCCCTCTCCGCACCCTT
TACCGGACCCGAAGTCGCAACAACTCGCGCACTGTCAGGGTTCGCAACTT
CCCTGCGCAGAGAACTCAGCCTCCTACAACAAAACAACATCGACGTCGTG
GAACTCAAGCTCGGTAACATAGACCTAGGCCCACAGTACCGCAACGCTCA
GAGTCACATCACCGGTACGGAAGTCCTCGCCTGGAGTGTGCAACAGCGAT
CCCTGTACGCCTCGCAGTATCTCAACAGCATCGAGCAACGACCTGCCGCG
TCCGCAGGGCCCAGCACGATCCGCGGATCACCGGCCCGGGCTCTACACTA
CGCTGTCCTGGACGCACTGGACCCGCCATCGAAGGATATCTTCGGCAGAA
AGGTGGCCAAGAACCCCGTCATCTATGTTGGTCGGGGGGCACGGTCGTAC
CATTTCATTGGCGAGTGGGTTCCCGCTGGACTGGTAGGCTGGATGCTGGG
GTTGCGGACCGGACAGCAGACACCCGCGGAGAATGGAAGCGGGGGGAGTA
GCGAGACGAGCTGGGAGAAGGTTTAATCGTCGCCGGGTCGCCCCATGAGC
CGATGACCAGAGCGATCGCCGCCGATCTGGAACGTCGAGGATACATAGTC
TACGTGACAGTCACGTCCGCAGAGGAGGAGCACATCGTGCAGTCGGACAA
TCGAGCAGATATCAAAGCCCTTTGGTTGGATCTCTCGGCCCTTGCCTCGA
TACCGCATGACGTAAGGAGATATTCCCTCCAAGTCGCCGAGTCGATCGAC
CGACAAGTGGACCACGCAGCCAACGCACTCCGCGATACCCTCTCTAGCCA
GTCATGGCTACCCACCTCCGTTCGGCCCGTATCCAGAAATCGACCCAGTC
CGCCTACACCGCGAGGACTTGTTGATCGCGTGCACAGTTGGGTCTTGCGC
AACCGAGCATGGAGCGCCGCCCTTATCGCCTTCTTGGGCACCAGCTGTGT
GCTGTACTATGGGAATAAGAAGCTGAATGGAAAGCGACGGAGAGCTAGGC
GAGCTGGAAATGGAGCCCGGAAGGAAATAGTGGATGACTAGTGACGACCA
GTTTTTCTTCGACTACACACCCTCCTCACCATCCGAAATACACCCCTCCT
TGAATGAGATCTACTCCCTCATTTCTCGACCTCAGTCGCCGATGGCCGGT
GTGCCCCCGCACACCTGCCAACTGAGCGGCCTCATCCTCGTACCCTCTCC
AAACTACGCCTCCGGCCCCGTGGCTACAATCCCACCCTCCTCCTGGATCG
ACACCGTCAACACCCGTCTTCTCTCCCCTATTCTTACAACCCAGATCTTC
CTCCCTCTCCTCACCCTCCGTAACACCAACAGCACCATCGTCGTCGCCTA
CCCGTCCATCTCCTCATCCCTCTCCGCACCCTTTACCGGACCCGAAGTCG
CAACAACTCGCGCACTGTCAGGGTTCGCAACTTCCCTGCGCAGAGAACTC
AGCCTCCTACAACAAAACAACATCGACGTCGTGGAACTCAAGCTCGGTAA
CATAGACCTAGGCCCACAGTACCGCAACGCTCAGAGTCACATCACCGGTA
CGGAAGTCCTCGCCTGGAGTGTGCAACAGCGATCCCTGTACGCCTCGCAG
TATCTCAACAGCATCGAGCAACGACCTGCCGCGTCCGCAGGGCCCAGCAC
GATCCGCGGATCACCGGCCCGGGCTCTACACTACGCTGTCCTGGACGCAC
TGGACCCGCCATCGAAGGATATCTTCGGCAGAAAGGTGGCCAAGAACCCC
GTCATCTATGTTGGTCGGGGGGCACGGTCGTACCATTTCATTGGCGAGTG
GGTTCCCGCTGGACTGGTAGGCTGGATGCTGGGGTTGCGGACCGGACAGC
AGACACCCGCGGAGAATGGAAGCGGGGGGAGTAGCGAGACGAGCTGGGAG
AAGGTTTAATCGTCGCCGGGTCGCCCCATGAGCCGATGACCAGAGCGATC
GCCGCCGATCTGGAACGTCGAGGATACATAGTCTACGTGACAGTCACGTC
CGCAGAGGAGGAGCACATCGTGCAGTCGGACAATCGAGCAGATATCAAAG
CCCTTTGGTTGGATCTCTCGGCCCTTGCCTCGATACCGCATGACGTAAGG
AGATATTCCCTCCAAGTCGCCGAGTCGATCGACCGACAAGTGGACCACGC
AGCCAACGCACTCCGCGATACCCTCTCTAGCCAGTCATGGCTACCCACCT
CCGTTCGGCCCGTATCCAGAAATCGACCCAGTCCGCCTACACCGCGAGGA
CTTGTTGATCGCGTGCACAGTTGGGTCTTGCGCAACCGAGCATGGAGCGC
CGCCCTTATCGCCTTCTTGGGCACCAGCTGTGTGCTGTACTATGGGAATA
AGAAGCTGAATGGAAAGCGACGGAGAGCTAGGCGAGCTGGAAATGGAGCC
CGGAAGGAAATAGTGGATGACTAGTGACGACCAGTTTTTCTTCGACTACA
CACCCTCCTCACCATCCGAAATACACCCCTCCTTGAATGAGATCTACTCC
CTCATTTCTCGACCTCAGTCGCCGATGGCCGGTGTGCCCCCGCACACCTG
CCAACTGAGCGGCCTCATCCTCGTACCCTCTCCAAACTACGCCTCCGGCC
CCGTGGCTACAATCCCACCCTCCTCCTGGATCGACACCGTCAACACCCGT
CTTCTCTCCCCTATTCTTACAACCCAGATCTTCCTCCCTCTCCTCACCCT
CCGTAACACCAACAGCACCATCGTCGTCGCCTACCCGTCCATCTCCTCAT
CCCTCTCCGCACCCTTTACCGGACCCGAAGTCGCAACAACTCGCGCACTG
TCAGGGTTCGCAACTTCCCTGCGCAGAGAACTCAGCCTCCTACAACAAAA
CAACATCGACGTCGTGGAACTCAAGCTCGGTAACATAGACCTAGGCCCAC
AGTACCGCAACGCTCAGAGTCACATCACCGGTACGGAAGTCCTCGCCTGG
AGTGTGCAACAGCGATCCCTGTACGCCTCGCAGTATCTCAACAGCATCGA
GCAACGACCTGCCGCGTCCGCAGGGCCCAGCACGATCCGCGGATCACCGG
CCCGGGCTCTACACTACGCTGTCCTGGACGCACTGGACCCGCCATCGAAG
GATATCTTCGGCAGAAAGGTGGCCAAGAACCCCGTCATCTATGTTGGTCG
GGGGGCACGGTCGTACCATTTCATTGGCGAGTGGGTTCCCGCTGGACTGG
TAGGCTGGATGCTGGGGTTGCGGACCGGACAGCAGACACCCGCGGAGAAT
GGAAGCGGGGGGAGTAGCGAGACGAGCTGGGAGAAGGTTTAATCGTCGCC
GGGTCGCCCCATGAGCCGATGACCAGAGCGATCGCCGCCGATCTGGAACG
TCGAGGATACATAGTCTACGTGACAGTCACGTCCGCAGAGGAGGAGCACA
TCGTGCAGTCGGACAATCGAGCAGATATCAAAGCCCTTTGGTTGGATCTC
TCGGCCCTTGCCTCGATACCGCATGACGTAAGGAGATATTCCCTCCAAGT
CGCCGAGTCGATCGACCGACAAGTGGACCACGCAGCCAACGCACTCCGCG
ATACCCTCTCTAGCCAGTCATGGCTACCCACCTCCGTTCGGCCCGTATCC
AGAAATCGACCCAGTCCGCCTACACCGCGAGGACTTGTTGATCGCGTGCA
CAGTTGGGTCTTGCGCAACCGAGCATGGAGCGCCGCCCTTATCGCCTTCT
TGGGCACCAGCTGTGTGCTGTACTATGGGAATAAGAAGCTGAATGGAAAG
CGACGGAGAGCTAGGCGAGCTGGAAATGGAGCCCGGAAGGAAATAGTGGA
TGACTAGTGACGACCAGTTTTTCTTCGACTAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010254-T1.utr3p1 | KJC3_010254-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010254-T1.utr5p1 | KJC3_010254-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013952 |
| DBxref | PFAM:PF08643 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2839182..2841106 - |
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