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KJC3_010261-T1, KJC3_010261-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010261-T1
Unique NameKJC3_010261-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2855498..2857970+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010261-T1 ID=KJC3_010261-T1|Name=KJC3_010261-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2473bp|location=Sequence derived from alignment at ch7:2855498..2857970+ (Aspergillus niger KJC3)
CGTGGGATTGACAGCCAGAATTAAAGGGAAAGGAAATCGCAGGTCGAGAA
TCTGAATCTATTACTCATTATCATTGGATGCGTCCGTCAACATGCTTTTG
CTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACGGAGCGGTTCTC
TGGGTACAGCTTCCCCCCCGCCTCCGGTATACGCCAGGCTACCAGCTAAC
AGCTCCATTCATGCTTCCTTCAGAACCCCGCCCGTATCAATCGATCAGAT
CGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGCCAGAATCCA
AAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGGGAGCTTGTC
CAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCCCTACATTGT
CACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATCTAGAGAACC
TGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGCCTGGCGCTG
ATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATTCGATGAATT
CGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGACTGCGCCCC
AGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTATCGAGAGGAG
GAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGTGATCTTCAG
CACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGGTGTTCCTGC
AGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAAAATGCTCCC
CAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGGTGTGCCTGG
CCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTTTCGGTATGT
ATTCGTTGTTATGCATCACCCACCGTTCGCAGTCACTAACCGCTTCTAGT
CTTGTTCCCTCGTCACCTAACCCCCCAGAGACGCTATGAGAACATCTCCC
ACATCCAGATATTCCGTGATTACTTCCATTACCACATCAAAGCATCCAAG
GTAGCTTTATATGTCATAATGCAGGCCAGTTCAATATGCTTACTAAGTCT
CCAGGCATACATCCACACTAGGATGCGCAAGAGGACCGCAGACTTCCTTC
AAGGTAAGAAGCGACCCCTAACAATTGTGGTATGTCCAGTTCACTAATGA
ATGATAGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAGAAAGGAA
GACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGATAGAGAGCTGGCTCAA
GAATATAATCTTTGTAAATTGCAGGCGAGGGGTGACATACGCACATGCAT
AAGTCCATTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTAGGATGTATAGA
TTGTCGAGCATCATAACTTTTATCTTCCCATTTTTCCTTCCTTTCATTAC
TTTTATTATTTTTTCTTTTTTGGCCCTCTCAACCTCGCATTGTCAAAACG
CATGACAGCTGCATGTGGCTTGAAGTAGTAGTGCGGCTGCCTTGCTTTGT
TTTATTTGCTGCAATATAATTCTACTAACCAACCCATAAATACCGCTGGC
TGCTGCTTCAGCTCTTCCGTTCCCTCCCTTCCGTGTGACGGATGTTGACA
AGTTGGTGCAGAGCTGCAAACACCTGAAATGAAGCTTTGAGGGAGTCTCC
TTAATCCCCACTACAGTGTTTCACTTTCCCCATCTGTCGCAACATATTTA
TCGGTCTAACCTCCAAGCTTGTCCTGCACGTTAAGCACACTGGCGTGGGT
CTAGTCACTGCGCTATTCCGCTACGGCCGACGAACACTCGCGCAAGATGC
ACTGGTTCGGAATCGAGCCTCAGATCGGCCGAAGCACTCCGATATGTTAC
CGTGGCTGTCTTCTAGCTGCAGCCACAAGTCCAGCTGGGTGAAAAGCACA
CAGATGACCGGGTTTAAGCGTGTGAACCATCCGAACCGCCCTATCAATGC
ACCGGATCGTCAAATATGACTCGGATCGCCCAACAGGTCGCCTTCAATTG
GGCAAGGCATTCCCAGGGGATTGGTTCGGTGTCGCACATTGACTGCAAGG
AGATTTAAGTGGTGTTGACTGCTGGCCAGGATCCGTGGGGGTCGTCACTA
TCTATCTAGCCAGCCTCGATCGGAGAAACGGGGGGGCTGTAGTGGTGATG
TGATCTCAGCTCGGGTCTATTCTACGATGATCGTTTCCGGTGTCTCCGCA
GGTTCTCATTCGACACGGCGATGTCTCTGCCTATTTGTTGGCTGACTGGG
AGTTTGGAGGGGTATGGCCGTCTCAGCGTGCTGTCCTCCATATTGGGTCT
ATCTATCATACGGGGTACATGCCGATAACCGCCTCCTGCGACCTTAGTGA
GATTACCGCATAATTTCTTTTGGAATCCGACACCAAGGGATTCACGCTGC
ATTGGCGTCCCCATTAAATGCGC
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Coding sequence (CDS) from alignment at ch7:2855498..2857970+

>KJC3_010261-T1 ID=KJC3_010261-T1|Name=KJC3_010261-T1|organism=Aspergillus niger KJC3|type=CDS|length=4815bp|location=Sequence derived from alignment at ch7:2855498..2857970+ (Aspergillus niger KJC3)
ATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACGGA
GCGGTTCTCTGGAACCCCGCCCGTATCAATCGATCAGATCGTTTCCGACT
TTGACGGAGTGACCTTTCATCTGTCTACGCCAGAATCCAAAACCAAGATC
CTCATCTCCATCAACGTGAAATGCTTCCGGGAGCTTGTCCAGTACGGCGC
CCAGGAGGTGCTGGAAAGGGAATACGGCCCCTACATTGTCACCCCAGAGC
CCGGCTATGACTTCTCCGTCCTGATCGATCTAGAGAACCTGCCCGCCGAG
CAAGAGGCGAAGGATGAACTCATCATGCGCCTGGCGCTGATGAAGCGCAA
CGCCATGGCCGCCCCCTTCGAGAGAGCATTCGATGAATTCGCCAAGTTAG
CCGAAGAGGCTTCGAGATACACAAGCGAGACTGCGCCCCAGGGAGTTAAG
GAGGGAGGAGAGGTTATGGCCATTCACTATCGAGAGGAGGAAGCGATTTA
TATCAAGGCCAGCCATGATCGTGTCACGGTGATCTTCAGCACAGTGTTCC
GGGAGGAGACAGATCGCATCTTTGGCAAGGTGTTCCTGCAGGAATTCGTC
GATGCCAGACGCCGTGTCCTCACCCTGCAAAATGCTCCCCAGGTACTCTT
CCGAAACGACTGTCCTCTGGAGCTGGCCGGTGTGCCTGGCCTTCAGAACG
GTAATGACGGTAGAATCAGCTACGTCACTTTCGTCTTGTTCCCTCGTCAC
CTAACCCCCCAGAGACGCTATGAGAACATCTCCCACATCCAGATATTCCG
TGATTACTTCCATTACCACATCAAAGCATCCAAGGCATACATCCACACTA
GGATGCGCAAGAGGACCGCAGACTTCCTTCAAGTTCTCAACCGGGCGCGG
CCCGAGAACGAGGAGCGAGAAAGGAAGACGGCCAGTGGCCGTACTTTCAG
GGTTCAGGGATAGATGCTTTTGCTAGACTATCACAACGTTCTCATCCACT
CCCTCCTGACGGAGCGGTTCTCTGGAACCCCGCCCGTATCAATCGATCAG
ATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGCCAGAATC
CAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGGGAGCTTG
TCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCCCTACATT
GTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATCTAGAGAA
CCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGCCTGGCGC
TGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATTCGATGAA
TTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGACTGCGCC
CCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTATCGAGAGG
AGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGTGATCTTC
AGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGGTGTTCCT
GCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAAAATGCTC
CCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGGTGTGCCT
GGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTTTCGTCTT
GTTCCCTCGTCACCTAACCCCCCAGAGACGCTATGAGAACATCTCCCACA
TCCAGATATTCCGTGATTACTTCCATTACCACATCAAAGCATCCAAGGCA
TACATCCACACTAGGATGCGCAAGAGGACCGCAGACTTCCTTCAAGTTCT
CAACCGGGCGCGGCCCGAGAACGAGGAGCGAGAAAGGAAGACGGCCAGTG
GCCGTACTTTCAGGGTTCAGGGATAGATGCTTTTGCTAGACTATCACAAC
GTTCTCATCCACTCCCTCCTGACGGAGCGGTTCTCTGGAACCCCGCCCGT
ATCAATCGATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGT
CTACGCCAGAATCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGC
TTCCGGGAGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATA
CGGCCCCTACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGA
TCGATCTAGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATC
ATGCGCCTGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAG
AGCATTCGATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAA
GCGAGACTGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATT
CACTATCGAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGT
CACGGTGATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTG
GCAAGGTGTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACC
CTGCAAAATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCT
GGCCGGTGTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACG
TCACTTTCGTCTTGTTCCCTCGTCACCTAACCCCCCAGAGACGCTATGAG
AACATCTCCCACATCCAGATATTCCGTGATTACTTCCATTACCACATCAA
AGCATCCAAGGCATACATCCACACTAGGATGCGCAAGAGGACCGCAGACT
TCCTTCAAGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAGAAAGG
AAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGATAGATGCTTTTGCT
AGACTATCACAACGTTCTCATCCACTCCCTCCTGACGGAGCGGTTCTCTG
GAACCCCGCCCGTATCAATCGATCAGATCGTTTCCGACTTTGACGGAGTG
ACCTTTCATCTGTCTACGCCAGAATCCAAAACCAAGATCCTCATCTCCAT
CAACGTGAAATGCTTCCGGGAGCTTGTCCAGTACGGCGCCCAGGAGGTGC
TGGAAAGGGAATACGGCCCCTACATTGTCACCCCAGAGCCCGGCTATGAC
TTCTCCGTCCTGATCGATCTAGAGAACCTGCCCGCCGAGCAAGAGGCGAA
GGATGAACTCATCATGCGCCTGGCGCTGATGAAGCGCAACGCCATGGCCG
CCCCCTTCGAGAGAGCATTCGATGAATTCGCCAAGTTAGCCGAAGAGGCT
TCGAGATACACAAGCGAGACTGCGCCCCAGGGAGTTAAGGAGGGAGGAGA
GGTTATGGCCATTCACTATCGAGAGGAGGAAGCGATTTATATCAAGGCCA
GCCATGATCGTGTCACGGTGATCTTCAGCACAGTGTTCCGGGAGGAGACA
GATCGCATCTTTGGCAAGGTGTTCCTGCAGGAATTCGTCGATGCCAGACG
CCGTGTCCTCACCCTGCAAAATGCTCCCCAGGTACTCTTCCGAAACGACT
GTCCTCTGGAGCTGGCCGGTGTGCCTGGCCTTCAGAACGGTAATGACGGT
AGAATCAGCTACGTCACTTTCGTCTTGTTCCCTCGTCACCTAACCCCCCA
GAGACGCTATGAGAACATCTCCCACATCCAGATATTCCGTGATTACTTCC
ATTACCACATCAAAGCATCCAAGGCATACATCCACACTAGGATGCGCAAG
AGGACCGCAGACTTCCTTCAAGTTCTCAACCGGGCGCGGCCCGAGAACGA
GGAGCGAGAAAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGAT
AGATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACG
GAGCGGTTCTCTGGAACCCCGCCCGTATCAATCGATCAGATCGTTTCCGA
CTTTGACGGAGTGACCTTTCATCTGTCTACGCCAGAATCCAAAACCAAGA
TCCTCATCTCCATCAACGTGAAATGCTTCCGGGAGCTTGTCCAGTACGGC
GCCCAGGAGGTGCTGGAAAGGGAATACGGCCCCTACATTGTCACCCCAGA
GCCCGGCTATGACTTCTCCGTCCTGATCGATCTAGAGAACCTGCCCGCCG
AGCAAGAGGCGAAGGATGAACTCATCATGCGCCTGGCGCTGATGAAGCGC
AACGCCATGGCCGCCCCCTTCGAGAGAGCATTCGATGAATTCGCCAAGTT
AGCCGAAGAGGCTTCGAGATACACAAGCGAGACTGCGCCCCAGGGAGTTA
AGGAGGGAGGAGAGGTTATGGCCATTCACTATCGAGAGGAGGAAGCGATT
TATATCAAGGCCAGCCATGATCGTGTCACGGTGATCTTCAGCACAGTGTT
CCGGGAGGAGACAGATCGCATCTTTGGCAAGGTGTTCCTGCAGGAATTCG
TCGATGCCAGACGCCGTGTCCTCACCCTGCAAAATGCTCCCCAGGTACTC
TTCCGAAACGACTGTCCTCTGGAGCTGGCCGGTGTGCCTGGCCTTCAGAA
CGGTAATGACGGTAGAATCAGCTACGTCACTTTCGTCTTGTTCCCTCGTC
ACCTAACCCCCCAGAGACGCTATGAGAACATCTCCCACATCCAGATATTC
CGTGATTACTTCCATTACCACATCAAAGCATCCAAGGCATACATCCACAC
TAGGATGCGCAAGAGGACCGCAGACTTCCTTCAAGTTCTCAACCGGGCGC
GGCCCGAGAACGAGGAGCGAGAAAGGAAGACGGCCAGTGGCCGTACTTTC
AGGGTTCAGGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005885Arp2/3 protein complex
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030041actin filament polymerization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARC2KJC3_010261Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010261-T1KJC3_010261-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010261-T1.utr5p1KJC3_010261-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010261-T1.exon1KJC3_010261-T1.exon1Aspergillus niger KJC3exon
KJC3_010261-T1.exon2KJC3_010261-T1.exon2Aspergillus niger KJC3exon
KJC3_010261-T1.exon3KJC3_010261-T1.exon3Aspergillus niger KJC3exon
KJC3_010261-T1.exon4KJC3_010261-T1.exon4Aspergillus niger KJC3exon
KJC3_010261-T1.exon5KJC3_010261-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010261-T1.cdsKJC3_010261-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010261-T1.utr3p1KJC3_010261-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263EQZ
DBxrefInterPro:IPR007188
DBxrefInterPro:IPR034666
DBxrefPFAM:PF04045
ProductARP2/3 actin-organizing complex subunit Arc34
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2855498..2857970 +
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