|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2925353..2926881- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010284-T1 ID=KJC3_010284-T1|Name=KJC3_010284-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1529bp|location=Sequence derived from alignment at ch7:2925353..2926881- (Aspergillus niger KJC3)
ATGGCTGCTGTAAGTTCCAATTCCGATGAAATGCGTGGTGTTCATCACCG
CTGACTCTCCCCGACAGCCAATTTCTACCGTCGCGGAGACCAAGGAGCTC
CGGGGTCTCAACCTCATCGCTGCTCATTCACACATTCGAGGACTCGGTGT
CGATGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAGGGCTGGTGGGCC
AGGAGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAAATGGTCAAGGAA
GGCAAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCCTCCTAGCACTGG
TAAAACAGCCATCGCCATGGGTATGGCGCAATCCCTCGGATCCGATGTTC
CCTTCACAATGCTCGCAGCGTCGGAGATCTTCTCCATGGAGATGTCCAAG
ACCGAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGGCGTTCGTATCAA
GGAGGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAATCCAAATCGACC
GCAGTGTTACTGGTGTAAGTGAGGCCTTGGGTGAGCTCTCATTGACGAAC
GCTTCTGACATCAGTTATCTTTTAGGGAAACAAACAAGGCAAGCTCACCA
TCAAGACGACCGACATGGAAACGATCTACGACATGGGAACAAAGATGATC
GACTCAATGACCAAGGAACGAGTGATGGCCGGTGACATTATCTCCATTGA
CAAATCCTCGGGCAAGATAACCAAGCTGGGACGTTCTTACGCTCGGTCGC
GCGACTATGATGCGATGGGAGCGGACACAAAGTTTGTCCAATGCCCTGAG
GGTGAACTCCAGGTTCGCAAGGAAATCGTGCACACCGTCAGCCTTCATGA
GATCGATGTGATCAACTCGCGGTCACAAGGATTCTTGGCTCTCTTCTCTG
GAGATACCGGTGAGATCAGGAGTGAAGTGAGGGATCAGATTAACACCAAG
GTGGCGGAGTGGAAGGAAGAAGGAAAAGCCGAGATTATCCCGGGAGTCCT
TTTCATTGATGAAGTGCACATGCTTGACATTGAATGCTTCTCTTACATCA
ACCGCGCTCTGGAGGCGGAACTGGCACCCATCGTCATCATGGCTAGCAAC
CGGGGCCACGCCCGGATTCGTGGTACGACATACAGCTCTCCGCACGGCCT
TCCCCTGGATTTCCTCGACCGCGTGGTGATTGTCAGCACACAGCCCTACT
CTGCCGATGAGATTAGGCAGATTCTGGCGATTCGCGCCCAGGAGGAAGAG
ATCGACCTTTCTCCGGACGCTTTGGCGCTGCTCACCAAGATCGGCCAGGA
GTCGAATCTACGCTACGCCAGCAACATCATCACCACCTCCCATTTGCTCA
GCCAAAAGCGTAAGGCGAAGGAGGTCAGCATTGATGACGTCCAGCGCAGT
TACCGGCTGTTCTACGACCCTGCACGGAGCGTCAAATTCGTCAGCACATA
CGAACAGCGTTTCATCGGCGATCAAGGTGCCGTTAGCTTCATTGCTCCTA
CAAACGGAGATGCGATGGAGCTTTCATAG back to topCoding sequence (CDS) from alignment at ch7:2925353..2926881- >KJC3_010284-T1 ID=KJC3_010284-T1|Name=KJC3_010284-T1|organism=Aspergillus niger KJC3|type=CDS|length=4230bp|location=Sequence derived from alignment at ch7:2925353..2926881- (Aspergillus niger KJC3)
GGAAACAAACAAGGCAAGCTCACCATCAAGACGACCGACATGGAAACGAT
CTACGACATGGGAACAAAGATGATCGACTCAATGACCAAGGAACGAGTGA
TGGCCGGTGACATTATCTCCATTGACAAATCCTCGGGCAAGATAACCAAG
CTGGGACGTTCTTACGCTCGGTCGCGCGACTATGATGCGATGGGAGCGGA
CACAAAGTTTGTCCAATGCCCTGAGGGTGAACTCCAGGTTCGCAAGGAAA
TCGTGCACACCGTCAGCCTTCATGAGATCGATGTGATCAACTCGCGGTCA
CAAGGATTCTTGGCTCTCTTCTCTGGAGATACCGGTGAGATCAGGAGTGA
AGTGAGGGATCAGATTAACACCAAGGTGGCGGAGTGGAAGGAAGAAGGAA
AAGCCGAGATTATCCCGGGAGTCCTTTTCATTGATGAAGTGCACATGCTT
GACATTGAATGCTTCTCTTACATCAACCGCGCTCTGGAGGCGGAACTGGC
ACCCATCGTCATCATGGCTAGCAACCGGGGCCACGCCCGGATTCGTGGTA
CGACATACAGCTCTCCGCACGGCCTTCCCCTGGATTTCCTCGACCGCGTG
GTGATTGTCAGCACACAGCCCTACTCTGCCGATGAGATTAGGCAGATTCT
GGCGATTCGCGCCCAGGAGGAAGAGATCGACCTTTCTCCGGACGCTTTGG
CGCTGCTCACCAAGATCGGCCAGGAGTCGAATCTACGCTACGCCAGCAAC
ATCATCACCACCTCCCATTTGCTCAGCCAAAAGCGTAAGGCGAAGGAGGT
CAGCATTGATGACGTCCAGCGCAGTTACCGGCTGTTCTACGACCCTGCAC
GGAGCGTCAAATTCGTCAGCACATACGAACAGCGTTTCATCGGCGATCAA
GGTGCCGTTAGCTTCATTGCTCCTACAAACGGAGATGCGATGGAGCTTTC
ATAGCCAATTTCTACCGTCGCGGAGACCAAGGAGCTCCGGGGTCTCAACC
TCATCGCTGCTCATTCACACATTCGAGGACTCGGTGTCGATGCAGACAGC
CTACAGCCTAGGGCTTCCTCTCAAGGGCTGGTGGGCCAGGAGAAGGCGAG
GAAGGCTGCCGCAGTGATTCTGCAAATGGTCAAGGAAGGCAAGATTGCCG
GTCGCGCGTTGCTGATTGCTGGCCCTCCTAGCACTGGTAAAACAGCCATC
GCCATGGGTATGGCGCAATCCCTCGGATCCGATGTTCCCTTCACAATGCT
CGCAGCGTCGGAGATCTTCTCCATGGAGATGTCCAAGACCGAGGCGCTCA
CGCAAGCCTTCCGCAAATCGATCGGCGTTCGTATCAAGGAGGAGAGTGAA
ATCATCGAGGGTGAAGTGGTTGAAATCCAAATCGACCGCAGTGTTACTGG
TATGGCTGCTGGAAACAAACAAGGCAAGCTCACCATCAAGACGACCGACA
TGGAAACGATCTACGACATGGGAACAAAGATGATCGACTCAATGACCAAG
GAACGAGTGATGGCCGGTGACATTATCTCCATTGACAAATCCTCGGGCAA
GATAACCAAGCTGGGACGTTCTTACGCTCGGTCGCGCGACTATGATGCGA
TGGGAGCGGACACAAAGTTTGTCCAATGCCCTGAGGGTGAACTCCAGGTT
CGCAAGGAAATCGTGCACACCGTCAGCCTTCATGAGATCGATGTGATCAA
CTCGCGGTCACAAGGATTCTTGGCTCTCTTCTCTGGAGATACCGGTGAGA
TCAGGAGTGAAGTGAGGGATCAGATTAACACCAAGGTGGCGGAGTGGAAG
GAAGAAGGAAAAGCCGAGATTATCCCGGGAGTCCTTTTCATTGATGAAGT
GCACATGCTTGACATTGAATGCTTCTCTTACATCAACCGCGCTCTGGAGG
CGGAACTGGCACCCATCGTCATCATGGCTAGCAACCGGGGCCACGCCCGG
ATTCGTGGTACGACATACAGCTCTCCGCACGGCCTTCCCCTGGATTTCCT
CGACCGCGTGGTGATTGTCAGCACACAGCCCTACTCTGCCGATGAGATTA
GGCAGATTCTGGCGATTCGCGCCCAGGAGGAAGAGATCGACCTTTCTCCG
GACGCTTTGGCGCTGCTCACCAAGATCGGCCAGGAGTCGAATCTACGCTA
CGCCAGCAACATCATCACCACCTCCCATTTGCTCAGCCAAAAGCGTAAGG
CGAAGGAGGTCAGCATTGATGACGTCCAGCGCAGTTACCGGCTGTTCTAC
GACCCTGCACGGAGCGTCAAATTCGTCAGCACATACGAACAGCGTTTCAT
CGGCGATCAAGGTGCCGTTAGCTTCATTGCTCCTACAAACGGAGATGCGA
TGGAGCTTTCATAGCCAATTTCTACCGTCGCGGAGACCAAGGAGCTCCGG
GGTCTCAACCTCATCGCTGCTCATTCACACATTCGAGGACTCGGTGTCGA
TGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAGGGCTGGTGGGCCAGG
AGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAAATGGTCAAGGAAGGC
AAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCCTCCTAGCACTGGTAA
AACAGCCATCGCCATGGGTATGGCGCAATCCCTCGGATCCGATGTTCCCT
TCACAATGCTCGCAGCGTCGGAGATCTTCTCCATGGAGATGTCCAAGACC
GAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGGCGTTCGTATCAAGGA
GGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAATCCAAATCGACCGCA
GTGTTACTGGTATGGCTGCTGGAAACAAACAAGGCAAGCTCACCATCAAG
ACGACCGACATGGAAACGATCTACGACATGGGAACAAAGATGATCGACTC
AATGACCAAGGAACGAGTGATGGCCGGTGACATTATCTCCATTGACAAAT
CCTCGGGCAAGATAACCAAGCTGGGACGTTCTTACGCTCGGTCGCGCGAC
TATGATGCGATGGGAGCGGACACAAAGTTTGTCCAATGCCCTGAGGGTGA
ACTCCAGGTTCGCAAGGAAATCGTGCACACCGTCAGCCTTCATGAGATCG
ATGTGATCAACTCGCGGTCACAAGGATTCTTGGCTCTCTTCTCTGGAGAT
ACCGGTGAGATCAGGAGTGAAGTGAGGGATCAGATTAACACCAAGGTGGC
GGAGTGGAAGGAAGAAGGAAAAGCCGAGATTATCCCGGGAGTCCTTTTCA
TTGATGAAGTGCACATGCTTGACATTGAATGCTTCTCTTACATCAACCGC
GCTCTGGAGGCGGAACTGGCACCCATCGTCATCATGGCTAGCAACCGGGG
CCACGCCCGGATTCGTGGTACGACATACAGCTCTCCGCACGGCCTTCCCC
TGGATTTCCTCGACCGCGTGGTGATTGTCAGCACACAGCCCTACTCTGCC
GATGAGATTAGGCAGATTCTGGCGATTCGCGCCCAGGAGGAAGAGATCGA
CCTTTCTCCGGACGCTTTGGCGCTGCTCACCAAGATCGGCCAGGAGTCGA
ATCTACGCTACGCCAGCAACATCATCACCACCTCCCATTTGCTCAGCCAA
AAGCGTAAGGCGAAGGAGGTCAGCATTGATGACGTCCAGCGCAGTTACCG
GCTGTTCTACGACCCTGCACGGAGCGTCAAATTCGTCAGCACATACGAAC
AGCGTTTCATCGGCGATCAAGGTGCCGTTAGCTTCATTGCTCCTACAAAC
GGAGATGCGATGGAGCTTTCATAGCCAATTTCTACCGTCGCGGAGACCAA
GGAGCTCCGGGGTCTCAACCTCATCGCTGCTCATTCACACATTCGAGGAC
TCGGTGTCGATGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAGGGCTG
GTGGGCCAGGAGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAAATGGT
CAAGGAAGGCAAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCCTCCTA
GCACTGGTAAAACAGCCATCGCCATGGGTATGGCGCAATCCCTCGGATCC
GATGTTCCCTTCACAATGCTCGCAGCGTCGGAGATCTTCTCCATGGAGAT
GTCCAAGACCGAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGGCGTTC
GTATCAAGGAGGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAATCCAA
ATCGACCGCAGTGTTACTGGTATGGCTGCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003678 | DNA helicase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR042487 |
| DBxref | InterPro:IPR010339 |
| DBxref | InterPro:IPR041048 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF17856 |
| DBxref | PFAM:PF06068 |
| Product | RuvB-like protein 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2925353..2926881 - |
|
