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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2979482..2981051+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010305-T1 ID=KJC3_010305-T1|Name=KJC3_010305-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1570bp|location=Sequence derived from alignment at ch7:2979482..2981051+ (Aspergillus niger KJC3)
CTCCAAATCGCTACAACCCATTCACCATGGCATCCGTTTACAAGACTATC
TCAAAGAAGGCAGCTCGTCAGCTCGCCAAGGAGGAGGAGTTCGATGAGGA
GGATATCGAGATGGAGGAACTTCTCGACAACGCCGACGACACCACCGACA
GCGAAAGCGATGAAGAAACTACGACCGAATCGGCCAAGAAGCAGCTCGCT
CAAGGATTCATGCCCAAGACTCGTGTACTGATGCTAACCTCTCGAGGTGT
GACATACCGGTATGCTTGATGCCCCCATCCAACATGATATATTAACAATG
TGCGAATGTGACGCTAATCTTTTCTGTTTGCTGCAGCCATCGACACCTGC
TCGCCGACCTTGCGTCTCTGCTTCCTCACACTCACAAGGAAAGCAAACTT
GACACCAAGAAGAAGACCGCTGGATACAATCTGCTCCTTAACTCTCTTGC
CGACCTTCACTCCTGCAACGTGATTTTCTTCCTCGAGGCTCGTAAGCAGG
GTCAGGACTTGTACCTCTGGCTTGCTCGTCCTCCCAATGGCCCGACGATC
AAGTTCCACGTCGCCAACTTGCACACAATGGCTGAATTGAATGCTGGATT
CAGCGGCAACTGCCTCAAGGGTGGCCGTGGTCTTGTTGTTTTCGATCGCT
CTTTCGACGAACAGGGTCCGCTCATGAGCCAACCCGGCAACGAATACCGG
GGTCTGATCAGAGAGATGCTGCGCGGTGTCTTCTGTGTCCCTAAGCGTGG
TGTCAAGGGCATGAAGCCATTCATTGACCGCATCATCGGTGTCTTCGGTG
TCGATGGCAAGATCTGGATTCGAGTCTACGAGATCCGCGAGTCCGAACCC
GGAAAGAAGTCTGAGGATGGTGCAGATGCCAAGCCCACTCCCAAGAGCAA
GGACGGTCAGCCGGAGGTTTCTCTGGTCGAGATCGGCCCCCGTTTTGTTC
TTACGCCTATTGTCATCCTGGAGGGCAGCTTTGGCGGCCCTGTCATCTAT
GAGAACAAGGAGTACGTGAGCCCGAACCAGGTCCGTCGCGAGGTCCGCAT
GAGCAAGGCGGCTCGCTACGCCAAGCGCAGAGATGGGCAGACCGACCGGT
TCGCGAAGCGGTCGAACCTGGGATTGGGAGAAGGCGAGAGGAAGCCGGAT
GCGCTCGACACAAGGCAACTGTTCAAGTGATGGATTTCCGTTTTGTTGGT
TCTTTCTGTTGTTTTACGCCCTATTAGACTTGATATCCTCAAGGGATGTA
TATGTATTGATGCGAGGGGTACATGCATGGTCCTGCTGGCGTCTGGTGTG
AAATAATAATAAAAGTTTTGATGCTACGGTTCACTATTATCCTGATTTTA
TGGATCTAATCATAGAATAAACGAACCTTGGACTTACTACTGAGTGGATT
AGTATCGTTGCTATGAGCCTCAGCGATTGGTAATAGGGGAACGGTCAGTC
TTCCAGCTCTCCAAAGAGTGGTGCAACTTGCAGCAAGGGAGGCCACGAAC
TACTGGGCTGTACGTTCTTGAGCTATAAGTATGTCGCAACTTTGACTGAA
AGAACGAAGTAGCTGGTGAG back to topCoding sequence (CDS) from alignment at ch7:2979482..2981051+ >KJC3_010305-T1 ID=KJC3_010305-T1|Name=KJC3_010305-T1|organism=Aspergillus niger KJC3|type=CDS|length=2154bp|location=Sequence derived from alignment at ch7:2979482..2981051+ (Aspergillus niger KJC3)
ATGGCATCCGTTTACAAGACTATCTCAAAGAAGGCAGCTCGTCAGCTCGC
CAAGGAGGAGGAGTTCGATGAGGAGGATATCGAGATGGAGGAACTTCTCG
ACAACGCCGACGACACCACCGACAGCGAAAGCGATGAAGAAACTACGACC
GAATCGGCCAAGAAGCAGCTCGCTCAAGGATTCATGCCCAAGACTCGTGT
ACTGATGCTAACCTCTCGAGGTGTGACATACCGCCATCGACACCTGCTCG
CCGACCTTGCGTCTCTGCTTCCTCACACTCACAAGGAAAGCAAACTTGAC
ACCAAGAAGAAGACCGCTGGATACAATCTGCTCCTTAACTCTCTTGCCGA
CCTTCACTCCTGCAACGTGATTTTCTTCCTCGAGGCTCGTAAGCAGGGTC
AGGACTTGTACCTCTGGCTTGCTCGTCCTCCCAATGGCCCGACGATCAAG
TTCCACGTCGCCAACTTGCACACAATGGCTGAATTGAATGCTGGATTCAG
CGGCAACTGCCTCAAGGGTGGCCGTGGTCTTGTTGTTTTCGATCGCTCTT
TCGACGAACAGGGTCCGCTCATGAGCCAACCCGGCAACGAATACCGGGGT
CTGATCAGAGAGATGCTGCGCGGTGTCTTCTGTGTCCCTAAGCGTGGTGT
CAAGGGCATGAAGCCATTCATTGACCGCATCATCGGTGTCTTCGGTGTCG
ATGGCAAGATCTGGATTCGAGTCTACGAGATCCGCGAGTCCGAACCCGGA
AAGAAGTCTGAGGATGGTGCAGATGCCAAGCCCACTCCCAAGAGCAAGGA
CGGTCAGCCGGAGGTTTCTCTGGTCGAGATCGGCCCCCGTTTTGTTCTTA
CGCCTATTGTCATCCTGGAGGGCAGCTTTGGCGGCCCTGTCATCTATGAG
AACAAGGAGTACGTGAGCCCGAACCAGGTCCGTCGCGAGGTCCGCATGAG
CAAGGCGGCTCGCTACGCCAAGCGCAGAGATGGGCAGACCGACCGGTTCG
CGAAGCGGTCGAACCTGGGATTGGGAGAAGGCGAGAGGAAGCCGGATGCG
CTCGACACAAGGCAACTGTTCAAGTGAATGGCATCCGTTTACAAGACTAT
CTCAAAGAAGGCAGCTCGTCAGCTCGCCAAGGAGGAGGAGTTCGATGAGG
AGGATATCGAGATGGAGGAACTTCTCGACAACGCCGACGACACCACCGAC
AGCGAAAGCGATGAAGAAACTACGACCGAATCGGCCAAGAAGCAGCTCGC
TCAAGGATTCATGCCCAAGACTCGTGTACTGATGCTAACCTCTCGAGGTG
TGACATACCGCCATCGACACCTGCTCGCCGACCTTGCGTCTCTGCTTCCT
CACACTCACAAGGAAAGCAAACTTGACACCAAGAAGAAGACCGCTGGATA
CAATCTGCTCCTTAACTCTCTTGCCGACCTTCACTCCTGCAACGTGATTT
TCTTCCTCGAGGCTCGTAAGCAGGGTCAGGACTTGTACCTCTGGCTTGCT
CGTCCTCCCAATGGCCCGACGATCAAGTTCCACGTCGCCAACTTGCACAC
AATGGCTGAATTGAATGCTGGATTCAGCGGCAACTGCCTCAAGGGTGGCC
GTGGTCTTGTTGTTTTCGATCGCTCTTTCGACGAACAGGGTCCGCTCATG
AGCCAACCCGGCAACGAATACCGGGGTCTGATCAGAGAGATGCTGCGCGG
TGTCTTCTGTGTCCCTAAGCGTGGTGTCAAGGGCATGAAGCCATTCATTG
ACCGCATCATCGGTGTCTTCGGTGTCGATGGCAAGATCTGGATTCGAGTC
TACGAGATCCGCGAGTCCGAACCCGGAAAGAAGTCTGAGGATGGTGCAGA
TGCCAAGCCCACTCCCAAGAGCAAGGACGGTCAGCCGGAGGTTTCTCTGG
TCGAGATCGGCCCCCGTTTTGTTCTTACGCCTATTGTCATCCTGGAGGGC
AGCTTTGGCGGCCCTGTCATCTATGAGAACAAGGAGTACGTGAGCCCGAA
CCAGGTCCGTCGCGAGGTCCGCATGAGCAAGGCGGCTCGCTACGCCAAGC
GCAGAGATGGGCAGACCGACCGGTTCGCGAAGCGGTCGAACCTGGGATTG
GGAGAAGGCGAGAGGAAGCCGGATGCGCTCGACACAAGGCAACTGTTCAA
GTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010305-T1.utr5p1 | KJC3_010305-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010305-T1.utr3p1 | KJC3_010305-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007109 |
| DBxref | PFAM:PF04427 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2979482..2981051 + |
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