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KJC3_010307-T1, KJC3_010307-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010307-T1
Unique NameKJC3_010307-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2983901..2985707-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010307-T1 ID=KJC3_010307-T1|Name=KJC3_010307-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1807bp|location=Sequence derived from alignment at ch7:2983901..2985707- (Aspergillus niger KJC3)
CTCCTAATCTCCCTGCCCCGGTGCCTGCCTCCCCTACACTCATCGGTAAG
TTCCTCCGATCCCGCCTCCCGTCGGTTACTTTTAAACGTCCCTTCTCCTC
GCTCCCCCCGAGTGCCTCTGTCCCTTGGATGTGGTCCTGAAAGCTGACAA
CGTTGCGCCCCTCCTTCCAGAAAGTCAGACACACTCTATTACCGGATTTC
CTTTCAAGAGCCTCCAAACCTCCCCCCAGCTCGACCACGTCGTCTCCCTT
CCCAGTCCTCTAGATCTTACGTGTAACAAAGCTAAGCGAGCTCTCGCATA
CCACCCCTCATGGCTAACGACGAGTACGATGTGAGTATCCTCTTTCTCTC
ATTCGCACCCCTTGCCAAGCAACGGTATAACTAACGGGCTACTTGGTAGT
TTCTCTTCAAAGGTAAAGTTGCCACTTCCCGTCTCCGCACAGTCGCCGCT
CGATCCCATCGCCTCTATTGTCGGCCGCATTTTCGCGATACACGGCTAAC
CAACGACGATTGTACTTAACAGTTGTCCTGATTGGAGACTCTGGTGTTGG
AAAGTCCAACCTTTTGAGTCGTTTCACCCGTAACGAGTTCAACCTGGACT
CCAAGTCCACCATCGGTGTCGAGTTCGCTACCCGCTCGATCCAGGTCGAT
TCCAAGACGATCAAGGCTCAGATTTGGGATACTGCTGGTCAGGAACGTTA
CCGTGCCATCACCTCCGCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCG
TCTACGATATCAGTAAGCACCAGACTTACGACAATGTCAACCGGTGGTTG
AAGGAACTCCGCGATCATGCCGACTCCAACATCGTTATCATGTTGGTCGG
TAACAAGAGTGATTTGAGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCA
AGCAATTCGCAAGTATGTTGGAACCTTCGCTGGCTTAGGATGAAATGTGC
TGGCGTGCTAACGTGCTACCAGGCGAGAACAACCTCTCTTTCATCGAGAC
ATCTGCCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCCTGA
CAGGTTAGACTTGCCCCCGGTCCTCAGTTTACCAGACGAATTCCGTCATG
CTGACGTTCTTGTCACCTTTAGAAATCTACCGTATCGTCTCCAGCAAGGC
TCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGGCGACCGCCGCGACA
TGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCAAGCAGGGATGCTGT
TAAGGGGCCACGAGATCGGGGAATGTGTGACACGTCAACCGCAACGACTT
TTTATTTTTGTGATGTGATAATTGAACGGTCTTGAACTCTCTTTTTGTCT
GTTACTTAGCCTCCTGGAGATGATACACAAGAGGGACGTTGTTAGGAATG
GCACCTGGGGTCATGGACATTGTACGGCGGTGTTTGTTGGACATCACATT
CTCCCGACACCTTGTTCGCTCTGCCTTTATATCTTCTGTTTCCCTTTTAC
CACTTTCCCCTCTATTCCTTTTGCTCCCCTTTCTTGTGGATTCCTCCCCC
TTCGTTTTCCTTTTTTTTTCTTCCCTATATTCTAACCTGATGAGAAATTG
ATCTGATTAACGTCTTACTGCTGTTCCCCCATGATGTCTGCCTAATGACG
GAAACCCAGATCCCTGTTTGGTTTAACGAATTTTGTTCCTATTTCCCACT
TTCCCCCCGGCGTCTTATCCGTGGCTCTACAGGATTGTCTGTTCGGTATG
CACAGTGGTTTTGCTAAGATTACTCGCTTATAAATGCAATAAAAGAAGAA
ATGCACA
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Coding sequence (CDS) from alignment at ch7:2983901..2985707-

>KJC3_010307-T1 ID=KJC3_010307-T1|Name=KJC3_010307-T1|organism=Aspergillus niger KJC3|type=CDS|length=3180bp|location=Sequence derived from alignment at ch7:2983901..2985707- (Aspergillus niger KJC3)
AAATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGGCGGTGATGCCGGC
CAGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGATCGACGAGTCGGA
GGACCCGAAGACCAAGCAGGGATGCTGTTAAGCGAGAACAACCTCTCTTT
CATCGAGACATCTGCCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAGA
ACATCCTGACAGTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAAC
CTTTTGAGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCAC
CATCGGTGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGA
TCAAGGCTCAGATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCATC
ACCTCCGCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATAT
CAGTAAGCACCAGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTCC
GCGATCATGCCGACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAGT
GATTTGAGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGC
AATTTCTCTTCAAAGATGGCTAACGACGAGTACGATAAATCTACCGTATC
GTCTCCAGCAAGGCTCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGG
CGACCGCCGCGACATGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCA
AGCAGGGATGCTGTTAAGCGAGAACAACCTCTCTTTCATCGAGACATCTG
CCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCCTGACAGTT
GTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTTGAGTCGTTT
CACCCGTAACGAGTTCAACCTGGACTCCAAGTCCACCATCGGTGTCGAGT
TCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGATCAAGGCTCAGATT
TGGGATACTGCTGGTCAGGAACGTTACCGTGCCATCACCTCCGCTTACTA
TCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATATCAGTAAGCACCAGA
CTTACGACAATGTCAACCGGTGGTTGAAGGAACTCCGCGATCATGCCGAC
TCCAACATCGTTATCATGTTGGTCGGTAACAAGAGTGATTTGAGGCACCT
GCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGCAATTTCTCTTCAAA
GATGGCTAACGACGAGTACGATAAATCTACCGTATCGTCTCCAGCAAGGC
TCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGGCGACCGCCGCGACA
TGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCAAGCAGGGATGCTGT
TAAGCGAGAACAACCTCTCTTTCATCGAGACATCTGCCCTTGACGCCAGC
AACGTCGAGCTTGCTTTCCAGAACATCCTGACAGTTGTCCTGATTGGAGA
CTCTGGTGTTGGAAAGTCCAACCTTTTGAGTCGTTTCACCCGTAACGAGT
TCAACCTGGACTCCAAGTCCACCATCGGTGTCGAGTTCGCTACCCGCTCG
ATCCAGGTCGATTCCAAGACGATCAAGGCTCAGATTTGGGATACTGCTGG
TCAGGAACGTTACCGTGCCATCACCTCCGCTTACTATCGGGGTGCTGTCG
GTGCTCTTCTCGTCTACGATATCAGTAAGCACCAGACTTACGACAATGTC
AACCGGTGGTTGAAGGAACTCCGCGATCATGCCGACTCCAACATCGTTAT
CATGTTGGTCGGTAACAAGAGTGATTTGAGGCACCTGCGGGCTGTGCCCA
CGGAAGAGGCCAAGCAATTCGCAATTTCTCTTCAAAGATGGCTAACGACG
AGTACGATAAATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGGCGGTG
ATGCCGGCCAGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGATCGAC
GAGTCGGAGGACCCGAAGACCAAGCAGGGATGCTGTTAAGCGAGAACAAC
CTCTCTTTCATCGAGACATCTGCCCTTGACGCCAGCAACGTCGAGCTTGC
TTTCCAGAACATCCTGACAGTTGTCCTGATTGGAGACTCTGGTGTTGGAA
AGTCCAACCTTTTGAGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCC
AAGTCCACCATCGGTGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTC
CAAGACGATCAAGGCTCAGATTTGGGATACTGCTGGTCAGGAACGTTACC
GTGCCATCACCTCCGCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTC
TACGATATCAGTAAGCACCAGACTTACGACAATGTCAACCGGTGGTTGAA
GGAACTCCGCGATCATGCCGACTCCAACATCGTTATCATGTTGGTCGGTA
ACAAGAGTGATTTGAGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAG
CAATTCGCAATTTCTCTTCAAAGATGGCTAACGACGAGTACGATAAATCT
ACCGTATCGTCTCCAGCAAGGCTCTGGATGGCGGTGATGCCGGCCAGACC
GTTCTGGGCGACCGCCGCGACATGGTGCGGATCGACGAGTCGGAGGACCC
GAAGACCAAGCAGGGATGCTGTTAAGCGAGAACAACCTCTCTTTCATCGA
GACATCTGCCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCC
TGACAGTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTTG
AGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCACCATCGG
TGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGATCAAGG
CTCAGATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCATCACCTCC
GCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATATCAGTAA
GCACCAGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTCCGCGATC
ATGCCGACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAGTGATTTG
AGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGCAATTTC
TCTTCAAAGATGGCTAACGACGAGTACGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAB11AKJC3_010307Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010307-T1KJC3_010307-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010307-T1.cdsKJC3_010307-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010307-T1.utr3p1KJC3_010307-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010307-T1.exon5KJC3_010307-T1.exon5Aspergillus niger KJC3exon
KJC3_010307-T1.exon4KJC3_010307-T1.exon4Aspergillus niger KJC3exon
KJC3_010307-T1.exon3KJC3_010307-T1.exon3Aspergillus niger KJC3exon
KJC3_010307-T1.exon2KJC3_010307-T1.exon2Aspergillus niger KJC3exon
KJC3_010307-T1.exon1KJC3_010307-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010307-T1.utr5p1KJC3_010307-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264HHW
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductRas- protein Rab-11A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2983901..2985707 -
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