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KJC3_010310-T1, KJC3_010310-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010310-T1
Unique NameKJC3_010310-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2993144..2993728-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010310-T1 ID=KJC3_010310-T1|Name=KJC3_010310-T1|organism=Aspergillus niger KJC3|type=mRNA|length=585bp|location=Sequence derived from alignment at ch7:2993144..2993728- (Aspergillus niger KJC3)
ATGGTAAGCTTTCCCCTAGTTGATATCATGCATGCACGTATTCTTACCAA
TACCTCCTTACTGCTATAGGCTCCTACTCGCTCGATCAAGAAGCCTGCAA
GTGGGAAAGGCGCTCTGCCCTCGTCTAAGCCCAGCTTTCTCCACGATGAG
TTTCGCACGACGAAGAAGGACAAGCGCTTGATTAAGCACAGCAGCTTTGT
GTCCAGGATAGAAAAGAACTCCCAGAAATCTACAAAGCGCCGGCGTGCCT
CCAAGAAACTTGCTGCTCTGGACTCATTGGCCGATGCGCTTCCGGACGCC
GACGATGCTGCTACCGACCCTAGCAAACAGGTTAATATCATCAAGCAGAA
AACTCTGCAGCATAGGCCAGGTGCTATGAAGCGTCGAGAGAAGCTAGAAC
GGCTGGAGCGCGATCGGTTTGCGAAGAATATGGCGCAGATGTCCAGCATG
CAAGCACCAGCGCCAACCACTACAGACTCCAACAGCAACACGGATGGGGG
CTCGGTTTCCAATCGATGGGCGGCCCTGCGGAACTTCATATCTCAAACTA
TGGAGCAGCAGCCTGCCTTCAAATCAAGCAGCTAG
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Coding sequence (CDS) from alignment at ch7:2993144..2993728-

>KJC3_010310-T1 ID=KJC3_010310-T1|Name=KJC3_010310-T1|organism=Aspergillus niger KJC3|type=CDS|length=1038bp|location=Sequence derived from alignment at ch7:2993144..2993728- (Aspergillus niger KJC3)
GCTCCTACTCGCTCGATCAAGAAGCCTGCAAGTGGGAAAGGCGCTCTGCC
CTCGTCTAAGCCCAGCTTTCTCCACGATGAGTTTCGCACGACGAAGAAGG
ACAAGCGCTTGATTAAGCACAGCAGCTTTGTGTCCAGGATAGAAAAGAAC
TCCCAGAAATCTACAAAGCGCCGGCGTGCCTCCAAGAAACTTGCTGCTCT
GGACTCATTGGCCGATGCGCTTCCGGACGCCGACGATGCTGCTACCGACC
CTAGCAAACAGGTTAATATCATCAAGCAGAAAACTCTGCAGCATAGGCCA
GGTGCTATGAAGCGTCGAGAGAAGCTAGAACGGCTGGAGCGCGATCGGTT
TGCGAAGAATATGGCGCAGATGTCCAGCATGCAAGCACCAGCGCCAACCA
CTACAGACTCCAACAGCAACACGGATGGGGGCTCGGTTTCCAATCGATGG
GCGGCCCTGCGGAACTTCATATCTCAAACTATGGAGCAGCAGCCTGCCTT
CAAATCAAGCAGCTAGATGGCTCCTACTCGCTCGATCAAGAAGCCTGCAA
GTGGGAAAGGCGCTCTGCCCTCGTCTAAGCCCAGCTTTCTCCACGATGAG
TTTCGCACGACGAAGAAGGACAAGCGCTTGATTAAGCACAGCAGCTTTGT
GTCCAGGATAGAAAAGAACTCCCAGAAATCTACAAAGCGCCGGCGTGCCT
CCAAGAAACTTGCTGCTCTGGACTCATTGGCCGATGCGCTTCCGGACGCC
GACGATGCTGCTACCGACCCTAGCAAACAGGTTAATATCATCAAGCAGAA
AACTCTGCAGCATAGGCCAGGTGCTATGAAGCGTCGAGAGAAGCTAGAAC
GGCTGGAGCGCGATCGGTTTGCGAAGAATATGGCGCAGATGTCCAGCATG
CAAGCACCAGCGCCAACCACTACAGACTCCAACAGCAACACGGATGGGGG
CTCGGTTTCCAATCGATGGGCGGCCCTGCGGAACTTCATATCTCAAACTA
TGGAGCAGCAGCCTGCCTTCAAATCAAGCAGCTAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030688preribosome, small subunit precursor
GO:003068690S preribosome
GO:0005730nucleolus
Vocabulary: Biological Process
TermDefinition
GO:0000462maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010310KJC3_010310Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010310-T1KJC3_010310-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010310-T1.cdsKJC3_010310-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010310-T1.exon2KJC3_010310-T1.exon2Aspergillus niger KJC3exon
KJC3_010310-T1.exon1KJC3_010310-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR028160
DBxrefPFAM:PF15341
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2993144..2993728 -
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