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KJC3_010311-T1, KJC3_010311-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010311-T1
Unique NameKJC3_010311-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2994261..2996363+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010311-T1 ID=KJC3_010311-T1|Name=KJC3_010311-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2103bp|location=Sequence derived from alignment at ch7:2994261..2996363+ (Aspergillus niger KJC3)
CCGCCTTTTTATCTTGCCCTTGCCAGGCTCAGTGGCTCAACTTACATCAG
GGCACCACCACACCGACACCGGTTCGATAAGATTGCCTTCTCATTTGTGG
CCTTGCATGTGGATGCTGTCTCCAGCGCGCCTTTTATCTCGCCGGACGTG
CCCTTTTCCATCGAGGACTACTACTGTGCCTGTGACTCTACCTCGGCCCC
CGACCTTCCATCACCTCCTGTCTACTCCATTGAGTCGGGAATTTTCGCCG
TGTCTATCAGCTTCCACAGCATATAAGCCTCAAGGGCGCGTCGCAGTCCG
CTACTTCTCGCATAGCCCTTTCCACTCGTCGATCATCCCCGCCAGTACCG
AAGCAACAATGGGCTCTCTCGGACCGTATCAGCGCAAACACAAGATCACT
GTGGTGGGCTCAGGAAACTGGTATGTGCAAGCTGGCTTTCCGTCATGGTG
CTAGTGCCAGGGAAGAAGGAAAAGGCTGACTCGGGTCATGTATAGGGGAT
GCGCAATCGCCAAAATTGTCGCCGAAAATGCCGCCAGCAACCCCGCAATT
TTCGAGGAGAAGGTTGAGATGTGGGTTTTTGAGGAGAAGGTGGAAATCTC
CAAAGACTCCCGGCACTATGATCCCTCTTCACCGCTGTGCCAGGGCCCAC
AAAACCTGACGGATGTGATCAACCAAAAGCACGAGAACATAAAATACCTG
CCAGGAATTACTCTCCCCTCCAACCTACATGCTAACCCGTCGTTGGTTGA
CGCAGTCAAGGATAGTACCATCCTTGTCTTCAACCTCCCCCACCAGTTTA
TCATCAAGACCTGTGAGCAGATCAAGGGCAAGATCCTGCCCTATGCGCGG
GGTATCTCCTGCATCAAGGGTGTCGATGTGAACGAAGAAGGTATTCATCT
CTTCTCCGAGACCATTGGCAAGATTCTGGGTATCTACTGCGGTGCTCTTT
CTGGCGCGAACATTGCGAGCGAGGTAGCCCTGGAAAAATGGTCCGAGTCA
AGCATTGCCTATGATCCTCCGCACATGGATTCCAAGGCGCCATCTCCCAA
TCGTTCCCCGTCTACGTCGACCGAGAATCTCGTTCAGTTCGAGCACAAGG
ATGTTTCCGGCCAACTATCACGAGTAAAGCTGCAAGCGCTGCCGTCCGAC
TACCCCCCTGTGGACCACGCCGTCCTGAAGTCGCTCTTCCATCGTCCGTA
TTTCCATATCCGTGTGGTGAGTGATGTCGCGGGTGTGTCGCTTGGAGGCG
CCCTTAAGAACGTAGTTGCTCTTGCTGCCGGCTGGGTCGACGGCATGGGC
TGGGGTGACAATGCCAAGGCTGCCATCATGCGGGTTGGCCTTCTCGAGAT
GGTCAAGTTTGGTGAAAAGTTCTTCGGGGCCACCATCAATACTCGAACCT
TCACTGAGGAAAGTGCGGGTGTTGCCGATCTGATTACTAGCTGCAGCGGT
GGCCGGAACTTTCGCTGCGCGAAACTCAGCATTGAGAGGAAACAGTCGAT
TGAGAAAGTCGAGGAGACGGAACTCAACGGCCAGAAGCTTCAGGGTACTT
TGACTGCGGTTGAGGTAAACAACTTCCTGAAGAAGCAAGGCCTTGAGGAG
GAATTTCCCTTGCTTACGGCTGTGTACCGTGAGTAACCCAGTTCCTTTTC
CCTTTATCTTGGTTTTTTGCCATCGATGTACTGACCATAAAACAGGTGTT
CTCGAGGGCAGTATGTCCGTTGGAGATATTCCTTCTTACATTGAGCGGTA
AATTGGACCTGTTGATCCTCTCCTTTGGTTTATGTTCGGGTTGTTAATTT
AGGGAAATCTGTTCCTTTTGTGTCTTGACAGAAAGCCGGAGTCTATCTCT
TACGTTGAAACCGGGCGGGTGACCAGCAGTGGAACCAGCCAGGCAGTCTT
GAGCGCCAGGTTGTGATCGGGGGCAGGATTCATGCATTACCCCCTCCTCT
TGTGTTTTCCCCATCCTTGTCACTTTCTTTCCTTTCTTTTCACCACCTTG
TTTGTCTTTATCACCATCTATCTTTTGGGGGAAGCGTCTGTTGGTAGGTA
TACTTTGTCGAGATTTTCTCATGCACATAGACCGATGACTATAGACCGCA
ATG
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Coding sequence (CDS) from alignment at ch7:2994261..2996363+

>KJC3_010311-T1 ID=KJC3_010311-T1|Name=KJC3_010311-T1|organism=Aspergillus niger KJC3|type=CDS|length=4509bp|location=Sequence derived from alignment at ch7:2994261..2996363+ (Aspergillus niger KJC3)
ATGTGGATGCTGTCTCCAGCGCGCCTTTTATCTCGCCGGACGTGCCCTTT
TCCATCGAGGACTACTACTGTGCCTGTGACTCTACCTCGGCCCCCGACCT
TCCATCACCTCCTGTCTACTCCATTGAGTCGGGAATTTTCGCCGTGTCTA
TCAGCTTCCACAGCATATAAGCCTCAAGGGCGCGTCGCAGTCCGCTACTT
CTCGCATAGCCCTTTCCACTCGTCGATCATCCCCGCCAGTACCGAAGCAA
CAATGGGCTCTCTCGGACCGTATCAGCGCAAACACAAGATCACTGTGGTG
GGCTCAGGAAACTGGGGATGCGCAATCGCCAAAATTGTCGCCGAAAATGC
CGCCAGCAACCCCGCAATTTTCGAGGAGAAGGTTGAGATGTGGGTTTTTG
AGGAGAAGGTGGAAATCTCCAAAGACTCCCGGCACTATGATCCCTCTTCA
CCGCTGTGCCAGGGCCCACAAAACCTGACGGATGTGATCAACCAAAAGCA
CGAGAACATAAAATACCTGCCAGGAATTACTCTCCCCTCCAACCTACATG
CTAACCCGTCGTTGGTTGACGCAGTCAAGGATAGTACCATCCTTGTCTTC
AACCTCCCCCACCAGTTTATCATCAAGACCTGTGAGCAGATCAAGGGCAA
GATCCTGCCCTATGCGCGGGGTATCTCCTGCATCAAGGGTGTCGATGTGA
ACGAAGAAGGTATTCATCTCTTCTCCGAGACCATTGGCAAGATTCTGGGT
ATCTACTGCGGTGCTCTTTCTGGCGCGAACATTGCGAGCGAGGTAGCCCT
GGAAAAATGGTCCGAGTCAAGCATTGCCTATGATCCTCCGCACATGGATT
CCAAGGCGCCATCTCCCAATCGTTCCCCGTCTACGTCGACCGAGAATCTC
GTTCAGTTCGAGCACAAGGATGTTTCCGGCCAACTATCACGAGTAAAGCT
GCAAGCGCTGCCGTCCGACTACCCCCCTGTGGACCACGCCGTCCTGAAGT
CGCTCTTCCATCGTCCGTATTTCCATATCCGTGTGGTGAGTGATGTCGCG
GGTGTGTCGCTTGGAGGCGCCCTTAAGAACGTAGTTGCTCTTGCTGCCGG
CTGGGTCGACGGCATGGGCTGGGGTGACAATGCCAAGGCTGCCATCATGC
GGGTTGGCCTTCTCGAGATGGTCAAGTTTGGTGAAAAGTTCTTCGGGGCC
ACCATCAATACTCGAACCTTCACTGAGGAAAGTGCGGGTGTTGCCGATCT
GATTACTAGCTGCAGCGGTGGCCGGAACTTTCGCTGCGCGAAACTCAGCA
TTGAGAGGAAACAGTCGATTGAGAAAGTCGAGGAGACGGAACTCAACGGC
CAGAAGCTTCAGGGTACTTTGACTGCGGTTGAGGTAAACAACTTCCTGAA
GAAGCAAGGCCTTGAGGAGGAATTTCCCTTGCTTACGGCTGTGTACCGTG
TTCTCGAGGGCAGTATGTCCGTTGGAGATATTCCTTCTTACATTGAGCGG
TAAATGTGGATGCTGTCTCCAGCGCGCCTTTTATCTCGCCGGACGTGCCC
TTTTCCATCGAGGACTACTACTGTGCCTGTGACTCTACCTCGGCCCCCGA
CCTTCCATCACCTCCTGTCTACTCCATTGAGTCGGGAATTTTCGCCGTGT
CTATCAGCTTCCACAGCATATAAGCCTCAAGGGCGCGTCGCAGTCCGCTA
CTTCTCGCATAGCCCTTTCCACTCGTCGATCATCCCCGCCAGTACCGAAG
CAACAATGGGCTCTCTCGGACCGTATCAGCGCAAACACAAGATCACTGTG
GTGGGCTCAGGAAACTGGGGATGCGCAATCGCCAAAATTGTCGCCGAAAA
TGCCGCCAGCAACCCCGCAATTTTCGAGGAGAAGGTTGAGATGTGGGTTT
TTGAGGAGAAGGTGGAAATCTCCAAAGACTCCCGGCACTATGATCCCTCT
TCACCGCTGTGCCAGGGCCCACAAAACCTGACGGATGTGATCAACCAAAA
GCACGAGAACATAAAATACCTGCCAGGAATTACTCTCCCCTCCAACCTAC
ATGCTAACCCGTCGTTGGTTGACGCAGTCAAGGATAGTACCATCCTTGTC
TTCAACCTCCCCCACCAGTTTATCATCAAGACCTGTGAGCAGATCAAGGG
CAAGATCCTGCCCTATGCGCGGGGTATCTCCTGCATCAAGGGTGTCGATG
TGAACGAAGAAGGTATTCATCTCTTCTCCGAGACCATTGGCAAGATTCTG
GGTATCTACTGCGGTGCTCTTTCTGGCGCGAACATTGCGAGCGAGGTAGC
CCTGGAAAAATGGTCCGAGTCAAGCATTGCCTATGATCCTCCGCACATGG
ATTCCAAGGCGCCATCTCCCAATCGTTCCCCGTCTACGTCGACCGAGAAT
CTCGTTCAGTTCGAGCACAAGGATGTTTCCGGCCAACTATCACGAGTAAA
GCTGCAAGCGCTGCCGTCCGACTACCCCCCTGTGGACCACGCCGTCCTGA
AGTCGCTCTTCCATCGTCCGTATTTCCATATCCGTGTGGTGAGTGATGTC
GCGGGTGTGTCGCTTGGAGGCGCCCTTAAGAACGTAGTTGCTCTTGCTGC
CGGCTGGGTCGACGGCATGGGCTGGGGTGACAATGCCAAGGCTGCCATCA
TGCGGGTTGGCCTTCTCGAGATGGTCAAGTTTGGTGAAAAGTTCTTCGGG
GCCACCATCAATACTCGAACCTTCACTGAGGAAAGTGCGGGTGTTGCCGA
TCTGATTACTAGCTGCAGCGGTGGCCGGAACTTTCGCTGCGCGAAACTCA
GCATTGAGAGGAAACAGTCGATTGAGAAAGTCGAGGAGACGGAACTCAAC
GGCCAGAAGCTTCAGGGTACTTTGACTGCGGTTGAGGTAAACAACTTCCT
GAAGAAGCAAGGCCTTGAGGAGGAATTTCCCTTGCTTACGGCTGTGTACC
GTGTTCTCGAGGGCAGTATGTCCGTTGGAGATATTCCTTCTTACATTGAG
CGGTAAATGTGGATGCTGTCTCCAGCGCGCCTTTTATCTCGCCGGACGTG
CCCTTTTCCATCGAGGACTACTACTGTGCCTGTGACTCTACCTCGGCCCC
CGACCTTCCATCACCTCCTGTCTACTCCATTGAGTCGGGAATTTTCGCCG
TGTCTATCAGCTTCCACAGCATATAAGCCTCAAGGGCGCGTCGCAGTCCG
CTACTTCTCGCATAGCCCTTTCCACTCGTCGATCATCCCCGCCAGTACCG
AAGCAACAATGGGCTCTCTCGGACCGTATCAGCGCAAACACAAGATCACT
GTGGTGGGCTCAGGAAACTGGGGATGCGCAATCGCCAAAATTGTCGCCGA
AAATGCCGCCAGCAACCCCGCAATTTTCGAGGAGAAGGTTGAGATGTGGG
TTTTTGAGGAGAAGGTGGAAATCTCCAAAGACTCCCGGCACTATGATCCC
TCTTCACCGCTGTGCCAGGGCCCACAAAACCTGACGGATGTGATCAACCA
AAAGCACGAGAACATAAAATACCTGCCAGGAATTACTCTCCCCTCCAACC
TACATGCTAACCCGTCGTTGGTTGACGCAGTCAAGGATAGTACCATCCTT
GTCTTCAACCTCCCCCACCAGTTTATCATCAAGACCTGTGAGCAGATCAA
GGGCAAGATCCTGCCCTATGCGCGGGGTATCTCCTGCATCAAGGGTGTCG
ATGTGAACGAAGAAGGTATTCATCTCTTCTCCGAGACCATTGGCAAGATT
CTGGGTATCTACTGCGGTGCTCTTTCTGGCGCGAACATTGCGAGCGAGGT
AGCCCTGGAAAAATGGTCCGAGTCAAGCATTGCCTATGATCCTCCGCACA
TGGATTCCAAGGCGCCATCTCCCAATCGTTCCCCGTCTACGTCGACCGAG
AATCTCGTTCAGTTCGAGCACAAGGATGTTTCCGGCCAACTATCACGAGT
AAAGCTGCAAGCGCTGCCGTCCGACTACCCCCCTGTGGACCACGCCGTCC
TGAAGTCGCTCTTCCATCGTCCGTATTTCCATATCCGTGTGGTGAGTGAT
GTCGCGGGTGTGTCGCTTGGAGGCGCCCTTAAGAACGTAGTTGCTCTTGC
TGCCGGCTGGGTCGACGGCATGGGCTGGGGTGACAATGCCAAGGCTGCCA
TCATGCGGGTTGGCCTTCTCGAGATGGTCAAGTTTGGTGAAAAGTTCTTC
GGGGCCACCATCAATACTCGAACCTTCACTGAGGAAAGTGCGGGTGTTGC
CGATCTGATTACTAGCTGCAGCGGTGGCCGGAACTTTCGCTGCGCGAAAC
TCAGCATTGAGAGGAAACAGTCGATTGAGAAAGTCGAGGAGACGGAACTC
AACGGCCAGAAGCTTCAGGGTACTTTGACTGCGGTTGAGGTAAACAACTT
CCTGAAGAAGCAAGGCCTTGAGGAGGAATTTCCCTTGCTTACGGCTGTGT
ACCGTGTTCTCGAGGGCAGTATGTCCGTTGGAGATATTCCTTCTTACATT
GAGCGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0009331glycerol-3-phosphate dehydrogenase complex
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016491oxidoreductase activity
GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0046168glycerol-3-phosphate catabolic process
GO:0055114oxidation-reduction process
GO:0006072glycerol-3-phosphate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GLD1_2KJC3_010311Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010311-T1KJC3_010311-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010311-T1.utr5p1KJC3_010311-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010311-T1.exon1KJC3_010311-T1.exon1Aspergillus niger KJC3exon
KJC3_010311-T1.exon2KJC3_010311-T1.exon2Aspergillus niger KJC3exon
KJC3_010311-T1.exon3KJC3_010311-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010311-T1.cdsKJC3_010311-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010311-T1.utr3p1KJC3_010311-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR006109
DBxrefInterPro:IPR011128
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR006168
DBxrefPFAM:PF01210
DBxrefPFAM:PF07479
Productmitochondrial glycerol dehydrogenase Gld1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2994261..2996363 +
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