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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3008955..3013262- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010315-T1 ID=KJC3_010315-T1|Name=KJC3_010315-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4308bp|location=Sequence derived from alignment at ch7:3008955..3013262- (Aspergillus niger KJC3)
GTCTATAACGCTCCACAATATATTGACCCTCAGCAAGCAAAATGACGTCT
TTTCTTATTAATGCATCTCAGGAAGAATCACAATGGGCTTGCATCTCAGA
GTTAGCCTCGCAGCTGGCCTGTGTAACGAACGTTGGAGGTGACACTGAGG
ATAAATCCCCGATTTCGAAGCCTTATTATACTTGTCTCCTGCGTGATCCG
CGCCTTTATACATTCTCAAACCAGTTGATTCAGGCCTTGCTACATCATGA
GTCAAAGGTCGATAATCGCAACATACACCAATTACTGTCCATCCTGAAAC
GGGAATCAAAGCGTATAACTCAGGCGCTTGATCGCTCTTCACTGCGTTGT
CTGGCATACCTATTGCTCAACTCAGACGTAGATAACGGGCTGAAGAATGG
AATTTACCTGCTGCTGGTCTGCTAGCTACCTATGTATGCACCTCTCCGCT
CTCTAATGCTTTCTATAGGATGAACCGCAATACATGAGAGACTCAGGGCA
CATGGTATATCAAGTAGCAAGCCCAAGAATTGAGGACAGGCCCCGCTTGC
TTCAGAGAAGGATATTGAGCAAGCTATACCTCTTGTTTTCCACTGAAGGC
CAAGCTACATGGCTACGGAAATTGGTGAGACCAAGACAATAACTGGTTCT
ATTGATTCTCATGTGAACAGGCTGGCAAAATGTTTCTGGAGATACTTTCG
GAGCCAGAGCATAATGACGCCTTCTTCCTTGAATCAGAAGAAGTGGAATT
GTCACGGTATTATACGCTTCTATGTGAGCGATGTTATCTGTGCTAATGCG
AAGCGCTCACCAGGCTTTCGTACGTCATCCTCAATGGAAACTGTACTCTG
AAACTGCTCGCGACTATCATGATCCATGCGCTACATAACTCGGGAGTAAG
CGACGAAGCACTCTGGAAATCCGACAGTAGCACGGACAGAGTCAGGTTCT
TCGATACTTTACCTTCCTATAGAAATGATCCGCTACAGCACTTTTACACC
TTATCCAACATGGCCGTTGTATCGGAAGTGGTAGATAAGACTTCCTACCT
CCGACGCTGCTTTCTTCTTCAGTCACTTCACATCGACGAGACACCATTGT
TCGAAGGAACTGTCCTTGCCATAATCGATGAGGGGTGTTTGACATTCATC
ACCTATAGACAGAACACAACGAGAATGTGCCTAGAATACGTTGAGTTCTA
CACTCAGAGCATCGGTCTACCCGTGCGCACGGTTGTGGACAAATCTATGA
TATATTGTCTGAAATTAGTCCTTTCCCAGAATAAGCTGGTCGTGAAAAAT
GGCAGACGGCTATGCTTCGAAGGCCATGATTTAAGCATCTTATCCGATAA
AGATCCTGGTGATTTGCGGAATGCCATCGAGGCATTCTGTCAGAATGATC
AGGGGTCTATAAATACGGATGGTATATTTCGGACATCTTCAATGGTGATG
GAACTGGATACGAGCGATGAAGTTGCAAGAAAATCTTCTGGGATCTCACC
TAACAACACACAGGGGCAGGAGGGACCCCGCACAGGTCCCATTTTGATAC
AAAAGTCTGTCAAAGAGTTGGAGAAACACTCAGAAGAGCTCGAGAAGTGC
AATACCACGAATGCGAATCTGGATGATGTTCATTTGGAACGTAATGGCTC
TCAGCAAGAGTGTCAGCGAACAAATTACGCAGGTGAACCTCCAGTGCCAT
TATCAAACCCATCACTGTCCAAAGGAGTACCGAGAAAACCATATGGTAGA
CTTGCACCAAATCCAGATACCGGAAGAAGAAGATCAAGTCGCTTGCAAAG
TGGGAATAGACGGAGAGACCCTCTATCGAATACTCAAGAGTCTATGGTCA
TCTATACGCGACATTCCAAGCAGAAGGTATATATAGCCAATTCCAAAGCT
GCTGTCGACTGGGACGAGGATCTCCGACCTAGTGACGATGAAGTGGAACG
GCCTTTTAAGGATGCGGAGGTAACTTCAATTTCTTCCCCCTTGCCCGGTG
AGACGTCCTTTGTCGGCAGTCGTTCGGCAGCTCCAGGCAAGAAGAGAGCA
GCCAGAGGGAGGAAGCTAGCCACAAAGCGCAAGAAGATAGTATCTTCTCG
CCCAACAAGAAAGAATGAAAACAATACCAAGAAAGCGACACCAGCATCAG
CATTTACAGAAGATGCTGACAACCCCAACCATAAGCCAGGGCACACACTA
TCAGATGATGACATAATAGGGAAACTGATACCTTGTTCGAGAGAAAGAAA
TGGACGTGCCATGGCCAAAAGTGCTCATGTCGAGCTCGTCTCTGATAATG
CCATCGTCGGATGTGACTCTGCTGCACCACAACACAATGATGATCGCACC
AGATCGCTTCGAATTCAAGCTTCCGGGAAAAATGAAAGTTATTCGGAGCT
ATCTACAAGTGTGACGGGTGATAATAACAATCAGATGAATACTCCTAAGT
GTCATCCGACCGCACAAGGACTTCAAGGTAGGGGCCGTGTAGTGGGGTAC
AAGCTGTCTGCAGCTTTCCAGCAAGGCTACCCCTCAGCAGGCCATGGCGG
GCATAAGGAAAACAGCTTAGAGCATATACAGACCCATAATAAGCTAGCAA
ACGAAAATGAGCTCGATTTGTCAGACACATTATATGTGTCCGTGTGTGAC
GGTGGAATACAGGGACAGCACGACATCACGGAGTCTGTCATAGAGCGATA
TACCATCTATGATGGGGTATTGCCCTTAGAAACACCAAACGAGCAATTCA
CGAGCAAAATTGAGGATGATCTTCATGCAGAATGTTCTGTCCAAAGGCAT
ACGAGCAGGAGCAGCTCCTTCAAGATTGACAACGAGGAGCCAAAGATGTT
GACCCAATCAGGTGGCTCCGCTGACTCAAGTCCATTGTGTGTAGGGGAAA
GTCGTTCTCATGAAGAATTTCCCTTTGAAATGTGCAAGGAGAGCCTCGGG
GCCGCGCATAATACTTGCACTTCCGACATGCCTCAGACCACATCCGAGGG
CATGAAAAGTCCGCGGGCTAGGCCAGTGAAGAGAAAGATAGCTGCGCTCA
GTCCAGACTATATGCGAGATGACCCAATTACAGGGGACCATGCTTCAGAA
AATGCTTTCAGGGAAGACTCTAGGCGGTTGGTTCGCAAACATCACTGGAA
TCCCACAAAGCGATTGAGAAACACCCCCCGATCAACTATAGTGGATGCTG
ATGGGAGCCCTCGCCTTCTATACCACATCAAAAGCGGATACATGGGTGGT
AGGGCCGACGTGGACGGAAATCCTCGAGAAATGTCAGGCGCGGGAGACAG
GTCCTCCACCAGCGAGCACGTTCGGGGGATCATGAAGGATGGTAAAAATG
GTGCACAAAATGACGAACTACCTGCTTTTTGCGAGCGAAACGTAATTTCA
GGATCGAAACATTCCGGAACCTGCACGAAACAAGTGAAGGAAGTACTGAC
CTTCCAGGATCGTCTAATGGCATGTACAGGTAAACCTACATCAAACAAGA
CCCCGCTTAGAAATCCCGCACGATCGAGTCCAAATGCACATTTGACATTG
GAACGCGATAACGAGCCTCATGCGACATGCAACTCCCTACCTGGGTCGAC
AGTAGTCCCAGACCAATTATCGGCGCAGTCATGTTCGCAGAAGCCAAGTA
CCACCGCAGATGGTGTCCTGGAGCACACCAGCTGGCAGACATCCCTGCAG
GTGCTTCACAAAAGAGCGCAAAGCATGCTTCTTGCGACAAGCGAGGTAGG
CGACATCCCGTGGGGATTCCAAGCGTTCATACTGAATTGGCTGCAAGCAT
ATAATCCAAGAAATTGAAAGCGAGAAAAAGACTATCAACGAAGTCTTAGA
GATGTATCGGCGAGATTGTCACCGGGTCCTGGATCAGCTCTTTGAAGCCC
AAGAAGAGCGGATAAGATTGTGCCAGCAACAGATGAATTCCATTCGCGAA
CACCATACCGAAGTATGCCAGGAGTTGATGCAGCGTCTAGAGCGGGACGA
GCAGCAGCTTCGGGATCGAATGCAGATGAGGAAATGACCTGAAGCTAGGC
CTCATCATCTCAGCTTCTGATGCTCCGACTTGATGAGGTTTCCGGTCCGG
GCTGACTCGGATCCGGATAGTATACACTTCAACAGTGAAGTCTCATCTTT
GCTCGGGCGATGACTCTGTACTTATTTCTTACAGCAACGGCTAGTCGTAT
CTGCAATTCGTATTCTGCAACACTCAAGGGGCGAAACCCAGATCCAGAGA
GAGATTAGTGCCAACGTAGCCTCCGAGCCAGGATGATCCGAAACTATATA
CAAGGTTT back to topCoding sequence (CDS) from alignment at ch7:3008955..3013262- >KJC3_010315-T1 ID=KJC3_010315-T1|Name=KJC3_010315-T1|organism=Aspergillus niger KJC3|type=CDS|length=6162bp|location=Sequence derived from alignment at ch7:3008955..3013262- (Aspergillus niger KJC3)
GCTTTCGTACGTCATCCTCAATGGAAACTGTACTCTGAAACTGCTCGCGA
CTATCATGATCCATGCGCTACATAACTCGGGAGTAAGCGACGAAGCACTC
TGGAAATCCGACAGTAGCACGGACAGAGTCAGGTTCTTCGATACTTTACC
TTCCTATAGAAATGATCCGCTACAGCACTTTTACACCTTATCCAACATGG
CCGTTGTATCGGAAGTGGTAGATAAGACTTCCTACCTCCGACGCTGCTTT
CTTCTTCAGTCACTTCACATCGACGAGACACCATTGTTCGAAGGAACTGT
CCTTGCCATAATCGATGAGGGGTGTTTGACATTCATCACCTATAGACAGA
ACACAACGAGAATGTGCCTAGAATACGTTGAGTTCTACACTCAGAGCATC
GGTCTACCCGTGCGCACGGTTGTGGACAAATCTATGATATATTGTCTGAA
ATTAGTCCTTTCCCAGAATAAGCTGGTCGTGAAAAATGGCAGACGGCTAT
GCTTCGAAGGCCATGATTTAAGCATCTTATCCGATAAAGATCCTGGTGAT
TTGCGGAATGCCATCGAGGCATTCTGTCAGAATGATCAGGGGTCTATAAA
TACGGATGGTATATTTCGGACATCTTCAATGGTGATGGAACTGGATACGA
GCGATGAAGTTGCAAGAAAATCTTCTGGGATCTCACCTAACAACACACAG
GGGCAGGAGGGACCCCGCACAGGTCCCATTTTGATACAAAAGTCTGTCAA
AGAGTTGGAGAAACACTCAGAAGAGCTCGAGAAGTGCAATACCACGAATG
CGAATCTGGATGATGTTCATTTGGAACGTAATGGCTCTCAGCAAGAGTGT
CAGCGAACAAATTACGCAGGTGAACCTCCAGTGCCATTATCAAACCCATC
ACTGTCCAAAGGAGTACCGAGAAAACCATATGGTAGACTTGCACCAAATC
CAGATACCGGAAGAAGAAGATCAAGTCGCTTGCAAAGTGGGAATAGACGG
AGAGACCCTCTATCGAATACTCAAGAGTCTATGGTCATCTATACGCGACA
TTCCAAGCAGAAGGTATATATAGCCAATTCCAAAGCTGCTGTCGACTGGG
ACGAGGATCTCCGACCTAGTGACGATGAAGTGGAACGGCCTTTTAAGGAT
GCGGAGGTAACTTCAATTTCTTCCCCCTTGCCCGGTGAGACGTCCTTTGT
CGGCAGTCGTTCGGCAGCTCCAGGCAAGAAGAGAGCAGCCAGAGGGAGGA
AGCTAGCCACAAAGCGCAAGAAGATAGTATCTTCTCGCCCAACAAGAAAG
AATGAAAACAATACCAAGAAAGCGACACCAGCATCAGCATTTACAGAAGA
TGCTGACAACCCCAACCATAAGCCAGGGCACACACTATCAGATGATGACA
TAATAGGGAAACTGATACCTTGTTCGAGAGAAAGAAATGGACGTGCCATG
GCCAAAAGTGCTCATGTCGAGCTCGTCTCTGATAATGCCATCGTCGGATG
TGACTCTGCTGCACCACAACACAATGATGATCGCACCAGATCGCTTCGAA
TTCAAGCTTCCGGGAAAAATGAAAGTTATTCGGAGCTATCTACAAGTGTG
ACGGGTGATAATAACAATCAGATGAATACTCCTAAGTGTCATCCGACCGC
ACAAGGACTTCAAGGTAGGGGCCGTGTAGTGGGGTACAAGCTGTCTGCAG
CTTTCCAGCAAGGCTACCCCTCAGCAGGCCATGGCGGGCATAAGGAAAAC
AGCTTAGAGCATATACAGACCCATAATAAGCTAGCAAACGAAAATGAGCT
CGATTTGTCAGACACATTATATGTGTCCGTGTGTGACGGTGGAATACAGG
GACAGCACGACATCACGGAGTCTGTCATAGAGCGATATACCATCTATGAT
GGGGTATTGCCCTTAGAAACACCAAACGAGCAATTCACGAGCAAAATTGA
GGATGATCTTCATGCAGAATGTTCTGTCCAAAGGCATACGAGCAGGAGCA
GCTCCTTCAAGATTGACAACGAGGAGCCAAAGATGTTGACCCAATCAGGT
GGCTCCGCTGACTCAAGTCCATTGTGTGTAGGGGAAAGTCGTTCTCATGA
AGAATTTCCCTTTGAAATGTGCAAGGAGAGCCTCGGGGCCGCGCATAATA
CTTGCACTTCCGACATGCCTCAGACCACATCCGAGGGCATGAAAAGTCCG
CGGGCTAGGCCAGTGAAGAGAAAGATAGCTGCGCTCAGTCCAGACTATAT
GCGAGATGACCCAATTACAGGGGACCATGCTTCAGAAAATGCTTTCAGGG
AAGACTCTAGGCGGTTGGTTCGCAAACATCACTGGAATCCCACAAAGCGA
TTGAGAAACACCCCCCGATCAACTATAGTGGATGCTGATGGGAGCCCTCG
CCTTCTATACCACATCAAAAGCGGATACATGGGTGGTAGGGCCGACGTGG
ACGGAAATCCTCGAGAAATGTCAGGCGCGGGAGACAGGTCCTCCACCAGC
GAGCACGTTCGGGGGATCATGAAGGATGGTAAAAATGGTGCACAAAATGA
CGAACTACCTGCTTTTTGCGAGCGAAACGTAATTTCAGGATCGAAACATT
CCGGAACCTGCACGAAACAAGTGAAGGAAGTACTGACCTTCCAGGATCGT
CTAATGGCATGTACAGGTAAACCTACATCAAACAAGACCCCGCTTAGAAA
TCCCGCACGATCGAGTCCAAATGCACATTTGACATTGGAACGCGATAACG
AGCCTCATGCGACATGCAACTCCCTACCTGGGTCGACAGTAGTCCCAGAC
CAATTATCGGCGCAGTCATGTTCGCAGAAGCCAAGTACCACCGCAGATGG
TGTCCTGGAGCACACCAGCTGGCAGACATCCCTGCAGGTGCTTCACAAAA
GAGCGCAAAGCATGCTTCTTGCGACAAGCGAGGTAGGCGACATCCCGTGG
GGATTCCAAGCGTTCATACTGAATTGGCTGCAAGCATATAATCCAAGAAA
TTGAATGTTTCTGGAGATACTTTCGGAGCCAGAGCATAATGACGCCTTCT
TCCTTGAATCAGAAGAAGTGGAATTGTCACGGCTTTCGTACGTCATCCTC
AATGGAAACTGTACTCTGAAACTGCTCGCGACTATCATGATCCATGCGCT
ACATAACTCGGGAGTAAGCGACGAAGCACTCTGGAAATCCGACAGTAGCA
CGGACAGAGTCAGGTTCTTCGATACTTTACCTTCCTATAGAAATGATCCG
CTACAGCACTTTTACACCTTATCCAACATGGCCGTTGTATCGGAAGTGGT
AGATAAGACTTCCTACCTCCGACGCTGCTTTCTTCTTCAGTCACTTCACA
TCGACGAGACACCATTGTTCGAAGGAACTGTCCTTGCCATAATCGATGAG
GGGTGTTTGACATTCATCACCTATAGACAGAACACAACGAGAATGTGCCT
AGAATACGTTGAGTTCTACACTCAGAGCATCGGTCTACCCGTGCGCACGG
TTGTGGACAAATCTATGATATATTGTCTGAAATTAGTCCTTTCCCAGAAT
AAGCTGGTCGTGAAAAATGGCAGACGGCTATGCTTCGAAGGCCATGATTT
AAGCATCTTATCCGATAAAGATCCTGGTGATTTGCGGAATGCCATCGAGG
CATTCTGTCAGAATGATCAGGGGTCTATAAATACGGATGGTATATTTCGG
ACATCTTCAATGGTGATGGAACTGGATACGAGCGATGAAGTTGCAAGAAA
ATCTTCTGGGATCTCACCTAACAACACACAGGGGCAGGAGGGACCCCGCA
CAGGTCCCATTTTGATACAAAAGTCTGTCAAAGAGTTGGAGAAACACTCA
GAAGAGCTCGAGAAGTGCAATACCACGAATGCGAATCTGGATGATGTTCA
TTTGGAACGTAATGGCTCTCAGCAAGAGTGTCAGCGAACAAATTACGCAG
GTGAACCTCCAGTGCCATTATCAAACCCATCACTGTCCAAAGGAGTACCG
AGAAAACCATATGGTAGACTTGCACCAAATCCAGATACCGGAAGAAGAAG
ATCAAGTCGCTTGCAAAGTGGGAATAGACGGAGAGACCCTCTATCGAATA
CTCAAGAGTCTATGGTCATCTATACGCGACATTCCAAGCAGAAGGTATAT
ATAGCCAATTCCAAAGCTGCTGTCGACTGGGACGAGGATCTCCGACCTAG
TGACGATGAAGTGGAACGGCCTTTTAAGGATGCGGAGGTAACTTCAATTT
CTTCCCCCTTGCCCGGTGAGACGTCCTTTGTCGGCAGTCGTTCGGCAGCT
CCAGGCAAGAAGAGAGCAGCCAGAGGGAGGAAGCTAGCCACAAAGCGCAA
GAAGATAGTATCTTCTCGCCCAACAAGAAAGAATGAAAACAATACCAAGA
AAGCGACACCAGCATCAGCATTTACAGAAGATGCTGACAACCCCAACCAT
AAGCCAGGGCACACACTATCAGATGATGACATAATAGGGAAACTGATACC
TTGTTCGAGAGAAAGAAATGGACGTGCCATGGCCAAAAGTGCTCATGTCG
AGCTCGTCTCTGATAATGCCATCGTCGGATGTGACTCTGCTGCACCACAA
CACAATGATGATCGCACCAGATCGCTTCGAATTCAAGCTTCCGGGAAAAA
TGAAAGTTATTCGGAGCTATCTACAAGTGTGACGGGTGATAATAACAATC
AGATGAATACTCCTAAGTGTCATCCGACCGCACAAGGACTTCAAGGTAGG
GGCCGTGTAGTGGGGTACAAGCTGTCTGCAGCTTTCCAGCAAGGCTACCC
CTCAGCAGGCCATGGCGGGCATAAGGAAAACAGCTTAGAGCATATACAGA
CCCATAATAAGCTAGCAAACGAAAATGAGCTCGATTTGTCAGACACATTA
TATGTGTCCGTGTGTGACGGTGGAATACAGGGACAGCACGACATCACGGA
GTCTGTCATAGAGCGATATACCATCTATGATGGGGTATTGCCCTTAGAAA
CACCAAACGAGCAATTCACGAGCAAAATTGAGGATGATCTTCATGCAGAA
TGTTCTGTCCAAAGGCATACGAGCAGGAGCAGCTCCTTCAAGATTGACAA
CGAGGAGCCAAAGATGTTGACCCAATCAGGTGGCTCCGCTGACTCAAGTC
CATTGTGTGTAGGGGAAAGTCGTTCTCATGAAGAATTTCCCTTTGAAATG
TGCAAGGAGAGCCTCGGGGCCGCGCATAATACTTGCACTTCCGACATGCC
TCAGACCACATCCGAGGGCATGAAAAGTCCGCGGGCTAGGCCAGTGAAGA
GAAAGATAGCTGCGCTCAGTCCAGACTATATGCGAGATGACCCAATTACA
GGGGACCATGCTTCAGAAAATGCTTTCAGGGAAGACTCTAGGCGGTTGGT
TCGCAAACATCACTGGAATCCCACAAAGCGATTGAGAAACACCCCCCGAT
CAACTATAGTGGATGCTGATGGGAGCCCTCGCCTTCTATACCACATCAAA
AGCGGATACATGGGTGGTAGGGCCGACGTGGACGGAAATCCTCGAGAAAT
GTCAGGCGCGGGAGACAGGTCCTCCACCAGCGAGCACGTTCGGGGGATCA
TGAAGGATGGTAAAAATGGTGCACAAAATGACGAACTACCTGCTTTTTGC
GAGCGAAACGTAATTTCAGGATCGAAACATTCCGGAACCTGCACGAAACA
AGTGAAGGAAGTACTGACCTTCCAGGATCGTCTAATGGCATGTACAGGTA
AACCTACATCAAACAAGACCCCGCTTAGAAATCCCGCACGATCGAGTCCA
AATGCACATTTGACATTGGAACGCGATAACGAGCCTCATGCGACATGCAA
CTCCCTACCTGGGTCGACAGTAGTCCCAGACCAATTATCGGCGCAGTCAT
GTTCGCAGAAGCCAAGTACCACCGCAGATGGTGTCCTGGAGCACACCAGC
TGGCAGACATCCCTGCAGGTGCTTCACAAAAGAGCGCAAAGCATGCTTCT
TGCGACAAGCGAGGTAGGCGACATCCCGTGGGGATTCCAAGCGTTCATAC
TGAATTGGCTGCAAGCATATAATCCAAGAAATTGAATGTTTCTGGAGATA
CTTTCGGAGCCAGAGCATAATGACGCCTTCTTCCTTGAATCAGAAGAAGT
GGAATTGTCACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010315-T1.utr3p1 | KJC3_010315-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3008955..3013262 - |
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