|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3028260..3030391+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010322-T1 ID=KJC3_010322-T1|Name=KJC3_010322-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2132bp|location=Sequence derived from alignment at ch7:3028260..3030391+ (Aspergillus niger KJC3)
CACGTGATAACGCTTATCTAAGCCACCCGCCCCCAGCTTCTCGCCCGGCT
GATTATGTCTTCTGTAACCGACTTGTACAATCGGCTTGGACCAGCCATAA
CATTTCGCGATCCTCACGCATCGTCCCGCTTTCCGTTGCTGCTGCGGGTG
ATAGCTGCTGGTCGTTGTGGGCCGGCCATCACGAACTCCTCGTCTATTCG
TTTTTGTCTTGTCTAATCCATCTCTCTCCCTGTCCTACTTCCTCCTGGGG
CTTTACGTACCTCCTCTCTCTTATGCCCCGCCGGTCCTAAGCGCCAGCGC
TACGCCCAGATCTAGACGATCCTCCTCAGTGCACGACCACCGTGAGCTGA
ATCCCGCTGCTGATAGCCTTGCGAACTCTTAAATTGAGTCCAGTCAGCAA
TTGACAACATCAAATTCCATTCAGTTGTGTTGTTTCCTGCAGAGGTGCTG
CAAAGCAAAGCTACCCGGTCCACCATGTCGCGTAAGTTCGGAAGTCTGAT
GATGTTCCCGGTCGATGCTCCACGCCGAGATCGCTCTCAGCTGACATCAT
GGCTTTTTCTTTTTCTATGCAACAGTATCTCCAGAAGCCCGCGATCAATA
CATTCCGATCATTGATTCAATTCTCGCCAGAAGTGATTTGACCACCATCT
CTTCAAAAACCATTCGCAACGGCCTTCAGGATGAGATCGGCTATGATCTT
ACCCCGCATAAGGTCTGCGCCCCCGGCCTTTCATTATTGTCGCATATTGC
TCTTTGCTCTTTCGATTCGTAGCGGTAGATCTCAAACATAATGCTAATGT
TACTTTTATTCATACAGCTTGCCATCAAGCAGCTTATCATGGAGCGGTTC
GACGTCTGTGCGGCACAAAAGGGCATCCAAACCGCATCCGAGACACCGGC
GACCTCTGCTTCCACCACCAATGGCCATGGGAAAGACCACGACTCGGTGA
CCCCTGTTGAGCCGTCCTCTCCGGCCCAATCTTCCATGTCGCAGAAACGC
CAAGCGGAGAGTGAGGAACATTCGGACACTTCAAGCAAGACTCCTCCTGT
TAAGAAGCAGAAGCCCGACAATGACATCGATGCGGATGCCCTGTTCGCGG
CCAAACTTCAGGCCGAGGAAAACATGCGTGCGCGCCAAACCCGCGGGGCT
AGTACACGCAGAAGCCAGCCTGTGAAGAAGAAGCAGCCTGCCAAGGCAAA
GACATCCAAGAAAGTGAAGGCTGAGGACGATTCGGACCTTGAATCGGGCT
CGGACTCAGGAAAGAAGGTCAACAGATCTGGCGGGTTTCACGTATGCTGC
AAATATTTCCTACTGGAGGTGACTGGTGCTGACGGCTGTCTAGAAACCGC
TGACTCTTTCCCCGGCACTTTCGGCTTTGTTGGATGGCGAGGTGACGGTA
TGACTATTTCTTCCCATTTCCGGTCGGGCAAGAACTACTACTAACATTCG
GACAGCTCTCGCGACCGCAGACAGTGAAGCGGCTTTGGCAATACATCCAC
GAGCATGATCTTCAGGATCCCAATGACCGGCGCCAAATCCGCTGTGACGA
TGCGATGCGTGCCGTGTTCAAGCAAGATCGCATACACATGTTTACGATGA
CCAAAATCCTCAGCCAGAATCTGTATAGTCCCGATGAATAACCTTAGGTA
TCTAGACGCGAACTTATGCCTTCCGGACAAGGCAATCGCAGCGACCAAGT
CGTTGCCTTAACGATTCCCCGACTTTTGCTTATTACACAGCATTTGGAAC
CCAGGCGCTAACTCTCTTTTCATTCTGCTCCAACATTTTATTACTTGCTT
CTCATATTGATATTTTGCTGCACTTGTTGCTACTCTCATTGGCGAACTGA
TTGCCCTATCTTTCTTTGTGTTGACCTGCTTTTCTCTCCAGCGGGAGTTG
GTGCTGCCTTGTGGACAGGCGCGATGGATGTTGCTACCTAGAGATCGTAT
TCGCTTATTGATTTGGCTACATACATCGCATCGCGTCATTGCATGATACA
TTTTCAGTTATCGCACGAGCAGCCGGTACAGTTGTAGCCGAAGGGGCTAG
TAATATGCATCCCATGGCTAAGCCGCACAGATGATCTGCCTTGTAGTTGC
ATGAGCTATAATGAGTCAAAATGAGTCATATC back to topCoding sequence (CDS) from alignment at ch7:3028260..3030391+ >KJC3_010322-T1 ID=KJC3_010322-T1|Name=KJC3_010322-T1|organism=Aspergillus niger KJC3|type=CDS|length=4290bp|location=Sequence derived from alignment at ch7:3028260..3030391+ (Aspergillus niger KJC3)
ATGTCGCTATCTCCAGAAGCCCGCGATCAATACATTCCGATCATTGATTC
AATTCTCGCCAGAAGTGATTTGACCACCATCTCTTCAAAAACCATTCGCA
ACGGCCTTCAGGATGAGATCGGCTATGATCTTACCCCGCATAAGCTTGCC
ATCAAGCAGCTTATCATGGAGCGGTTCGACGTCTGTGCGGCACAAAAGGG
CATCCAAACCGCATCCGAGACACCGGCGACCTCTGCTTCCACCACCAATG
GCCATGGGAAAGACCACGACTCGGTGACCCCTGTTGAGCCGTCCTCTCCG
GCCCAATCTTCCATGTCGCAGAAACGCCAAGCGGAGAGTGAGGAACATTC
GGACACTTCAAGCAAGACTCCTCCTGTTAAGAAGCAGAAGCCCGACAATG
ACATCGATGCGGATGCCCTGTTCGCGGCCAAACTTCAGGCCGAGGAAAAC
ATGCGTGCGCGCCAAACCCGCGGGGCTAGTACACGCAGAAGCCAGCCTGT
GAAGAAGAAGCAGCCTGCCAAGGCAAAGACATCCAAGAAAGTGAAGGCTG
AGGACGATTCGGACCTTGAATCGGGCTCGGACTCAGGAAAGAAGGTCAAC
AGATCTGGCGGGTTTCACAAACCGCTGACTCTTTCCCCGGCACTTTCGGC
TTTGTTGGATGGCGAGGTGACGCTCTCGCGACCGCAGACAGTGAAGCGGC
TTTGGCAATACATCCACGAGCATGATCTTCAGGATCCCAATGACCGGCGC
CAAATCCGCTGTGACGATGCGATGCGTGCCGTGTTCAAGCAAGATCGCAT
ACACATGTTTACGATGACCAAAATCCTCAGCCAGAATCTGTATAGTCCCG
ATGAATAAATGTCGCTATCTCCAGAAGCCCGCGATCAATACATTCCGATC
ATTGATTCAATTCTCGCCAGAAGTGATTTGACCACCATCTCTTCAAAAAC
CATTCGCAACGGCCTTCAGGATGAGATCGGCTATGATCTTACCCCGCATA
AGCTTGCCATCAAGCAGCTTATCATGGAGCGGTTCGACGTCTGTGCGGCA
CAAAAGGGCATCCAAACCGCATCCGAGACACCGGCGACCTCTGCTTCCAC
CACCAATGGCCATGGGAAAGACCACGACTCGGTGACCCCTGTTGAGCCGT
CCTCTCCGGCCCAATCTTCCATGTCGCAGAAACGCCAAGCGGAGAGTGAG
GAACATTCGGACACTTCAAGCAAGACTCCTCCTGTTAAGAAGCAGAAGCC
CGACAATGACATCGATGCGGATGCCCTGTTCGCGGCCAAACTTCAGGCCG
AGGAAAACATGCGTGCGCGCCAAACCCGCGGGGCTAGTACACGCAGAAGC
CAGCCTGTGAAGAAGAAGCAGCCTGCCAAGGCAAAGACATCCAAGAAAGT
GAAGGCTGAGGACGATTCGGACCTTGAATCGGGCTCGGACTCAGGAAAGA
AGGTCAACAGATCTGGCGGGTTTCACAAACCGCTGACTCTTTCCCCGGCA
CTTTCGGCTTTGTTGGATGGCGAGGTGACGCTCTCGCGACCGCAGACAGT
GAAGCGGCTTTGGCAATACATCCACGAGCATGATCTTCAGGATCCCAATG
ACCGGCGCCAAATCCGCTGTGACGATGCGATGCGTGCCGTGTTCAAGCAA
GATCGCATACACATGTTTACGATGACCAAAATCCTCAGCCAGAATCTGTA
TAGTCCCGATGAATAAATGTCGCTATCTCCAGAAGCCCGCGATCAATACA
TTCCGATCATTGATTCAATTCTCGCCAGAAGTGATTTGACCACCATCTCT
TCAAAAACCATTCGCAACGGCCTTCAGGATGAGATCGGCTATGATCTTAC
CCCGCATAAGCTTGCCATCAAGCAGCTTATCATGGAGCGGTTCGACGTCT
GTGCGGCACAAAAGGGCATCCAAACCGCATCCGAGACACCGGCGACCTCT
GCTTCCACCACCAATGGCCATGGGAAAGACCACGACTCGGTGACCCCTGT
TGAGCCGTCCTCTCCGGCCCAATCTTCCATGTCGCAGAAACGCCAAGCGG
AGAGTGAGGAACATTCGGACACTTCAAGCAAGACTCCTCCTGTTAAGAAG
CAGAAGCCCGACAATGACATCGATGCGGATGCCCTGTTCGCGGCCAAACT
TCAGGCCGAGGAAAACATGCGTGCGCGCCAAACCCGCGGGGCTAGTACAC
GCAGAAGCCAGCCTGTGAAGAAGAAGCAGCCTGCCAAGGCAAAGACATCC
AAGAAAGTGAAGGCTGAGGACGATTCGGACCTTGAATCGGGCTCGGACTC
AGGAAAGAAGGTCAACAGATCTGGCGGGTTTCACAAACCGCTGACTCTTT
CCCCGGCACTTTCGGCTTTGTTGGATGGCGAGGTGACGCTCTCGCGACCG
CAGACAGTGAAGCGGCTTTGGCAATACATCCACGAGCATGATCTTCAGGA
TCCCAATGACCGGCGCCAAATCCGCTGTGACGATGCGATGCGTGCCGTGT
TCAAGCAAGATCGCATACACATGTTTACGATGACCAAAATCCTCAGCCAG
AATCTGTATAGTCCCGATGAATAAATGTCGCTATCTCCAGAAGCCCGCGA
TCAATACATTCCGATCATTGATTCAATTCTCGCCAGAAGTGATTTGACCA
CCATCTCTTCAAAAACCATTCGCAACGGCCTTCAGGATGAGATCGGCTAT
GATCTTACCCCGCATAAGCTTGCCATCAAGCAGCTTATCATGGAGCGGTT
CGACGTCTGTGCGGCACAAAAGGGCATCCAAACCGCATCCGAGACACCGG
CGACCTCTGCTTCCACCACCAATGGCCATGGGAAAGACCACGACTCGGTG
ACCCCTGTTGAGCCGTCCTCTCCGGCCCAATCTTCCATGTCGCAGAAACG
CCAAGCGGAGAGTGAGGAACATTCGGACACTTCAAGCAAGACTCCTCCTG
TTAAGAAGCAGAAGCCCGACAATGACATCGATGCGGATGCCCTGTTCGCG
GCCAAACTTCAGGCCGAGGAAAACATGCGTGCGCGCCAAACCCGCGGGGC
TAGTACACGCAGAAGCCAGCCTGTGAAGAAGAAGCAGCCTGCCAAGGCAA
AGACATCCAAGAAAGTGAAGGCTGAGGACGATTCGGACCTTGAATCGGGC
TCGGACTCAGGAAAGAAGGTCAACAGATCTGGCGGGTTTCACAAACCGCT
GACTCTTTCCCCGGCACTTTCGGCTTTGTTGGATGGCGAGGTGACGCTCT
CGCGACCGCAGACAGTGAAGCGGCTTTGGCAATACATCCACGAGCATGAT
CTTCAGGATCCCAATGACCGGCGCCAAATCCGCTGTGACGATGCGATGCG
TGCCGTGTTCAAGCAAGATCGCATACACATGTTTACGATGACCAAAATCC
TCAGCCAGAATCTGTATAGTCCCGATGAATAAATGTCGCTATCTCCAGAA
GCCCGCGATCAATACATTCCGATCATTGATTCAATTCTCGCCAGAAGTGA
TTTGACCACCATCTCTTCAAAAACCATTCGCAACGGCCTTCAGGATGAGA
TCGGCTATGATCTTACCCCGCATAAGCTTGCCATCAAGCAGCTTATCATG
GAGCGGTTCGACGTCTGTGCGGCACAAAAGGGCATCCAAACCGCATCCGA
GACACCGGCGACCTCTGCTTCCACCACCAATGGCCATGGGAAAGACCACG
ACTCGGTGACCCCTGTTGAGCCGTCCTCTCCGGCCCAATCTTCCATGTCG
CAGAAACGCCAAGCGGAGAGTGAGGAACATTCGGACACTTCAAGCAAGAC
TCCTCCTGTTAAGAAGCAGAAGCCCGACAATGACATCGATGCGGATGCCC
TGTTCGCGGCCAAACTTCAGGCCGAGGAAAACATGCGTGCGCGCCAAACC
CGCGGGGCTAGTACACGCAGAAGCCAGCCTGTGAAGAAGAAGCAGCCTGC
CAAGGCAAAGACATCCAAGAAAGTGAAGGCTGAGGACGATTCGGACCTTG
AATCGGGCTCGGACTCAGGAAAGAAGGTCAACAGATCTGGCGGGTTTCAC
AAACCGCTGACTCTTTCCCCGGCACTTTCGGCTTTGTTGGATGGCGAGGT
GACGCTCTCGCGACCGCAGACAGTGAAGCGGCTTTGGCAATACATCCACG
AGCATGATCTTCAGGATCCCAATGACCGGCGCCAAATCCGCTGTGACGAT
GCGATGCGTGCCGTGTTCAAGCAAGATCGCATACACATGTTTACGATGAC
CAAAATCCTCAGCCAGAATCTGTATAGTCCCGATGAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010322-T1.utr5p1 | KJC3_010322-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010322-T1.utr3p1 | KJC3_010322-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR014876 |
| DBxref | InterPro:IPR036885 |
| DBxref | InterPro:IPR003121 |
| DBxref | InterPro:IPR019835 |
| DBxref | PFAM:PF02201 |
| DBxref | PFAM:PF08766 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3028260..3030391 + |
|
