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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3053857..3055615+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010331-T1 ID=KJC3_010331-T1|Name=KJC3_010331-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1759bp|location=Sequence derived from alignment at ch7:3053857..3055615+ (Aspergillus niger KJC3)
ATGCCTGCACGGCGCACCTATAGAGCCCCGGCGCGGAATGGCTGTTTTGA
GTGCAGGAACCGGCGAATCAAGGTAGGTGCTCTTGGGGTTTTAGTCCCGG
TGAAGCTTAACTTAAGTTGCCTGGCCTGGCCTGCTATTTTCTTGGTTGTC
TCTCTGGTCCACTGAAAGTTTCCATCCTTTTTCCCTTCTTCTGCTGCTGC
TGCTGCTGCTGCTGCTTCTTCTTCTTACATCTTCCCTCTTTTTTAATTTC
TCTCTTCTGTTTCTTTCCCTTCTCCATTCACCAATTTCCCTCTCCCTTTC
CTCTCCCCCATCATTGTCTGGGTGCCTGGATGCCTGAATGATGCAGTGAT
CCCTTCCCTTCTCTTCCCGGCTTCCTCCCTCCACTCCCTCCTCCCTCCTA
CTTTAGATATGTACCTATCAGTGGAGCTTTATCTGCTTGTTTGATTGCTG
CTGTGGACCGGGACCTTTGCTACTTTCCATTCCCACCACTACTACCACCA
CCATCATTACCACACCCCCCCTCCTCCCTCCCCTGAATTACACCGCATCA
CTTTTTAACTTCCAGTGGTTCTTTTCAAATTGGGACTGGTGGTCCTGTGT
CGCCCTCATAGATGCTAATTGGACCGGGATGCAGTGCCCCAACGAACACC
CCCAGTGCTCCCATTGCACCAGCGACAACATAATATGTCAATATATTCCC
TCCTCCCACTCCTTGGTCTGGCCTAGGGTCAAGTCTCGCTCCACCACCCC
GACCCTTCCCCCATCCCGCACCGCCTCCCCTTCCCACATGAACCCCAGGA
TTCTCGCTGAATACCGCGTCGTCATGGACCCCGTCGCCCCTTCCAATCCC
ACCGGGGAGCTCAACATTCAAGACCTCGAGTTGATGATGCAATGGTGCAC
GACCACATACCGCTCGGTCTCGCGAAATACCTCGGTAGAGGGAATCTGGC
AGGGCGTCGTGCCGCGGGAAGCCATGCGCCACCCATTCTTGATGCACGGC
ATCTTGGCTCTCTCCGCCCTGGACCTGGGCTTCAACTGCCCCTCCGGCCC
GCCTAAAGACTACTACATCCGAACCGCCCAGGCACATCAGTCCCGGGCTG
TGACCGGTCTCGGCAAGGTCGCCGGATGTCTGGATCAATCCAACTGCAAT
GCCGCTTTTGCCTTGTCCAGTATCATGGTGGTCTTTTCCTTCGCCCTCCC
TCGGACGACGAACAAACACGGGGACGTCCTGAATGAGCTTCTCAACATAT
TTCGGTTCACACGCGGGTCGGTGGACGTCCAAGGAGGAATCATCGATTGG
GTCGCGGACGGCGAATTCAGCCCGCTGCTCGAGTGCGACACCTCGCAGCC
AACCATGCCCGACACGTCTCGGCTGGCCATCATGTCGCTGACACGAATGA
ATGCGGACCTCGCCAGCCGCGATCCCGCGCATGATAAGGCCACGTATGAC
ACGACGATCCGGTACCTGAGCTACTCGCTGGACAAGCTGGCCCGGGGCGG
AGAAACCATGATTATTGCCTTCCAGTGGATCTTCCAGATCCCGCCGCGAT
ACTTGGATTTGCTGCAGCAGAGGCAGCCCTTCGCGTTAGCCATCTTGGCC
CATTACGCGGTGATTATCCACTCGTTGCGAGGACATTGGTGGATGGGCGA
GTGGGGAGCGCGACTGATCCGGGAGATCGGCCAGCACCTGGGTGCAGACT
GGAGAGACTCAATCAGTTGGGTGGTGGACGCGACAGGCTGCTATATTCCT
CCAGTCTGA back to topCoding sequence (CDS) from alignment at ch7:3053857..3055615+ >KJC3_010331-T1 ID=KJC3_010331-T1|Name=KJC3_010331-T1|organism=Aspergillus niger KJC3|type=CDS|length=2394bp|location=Sequence derived from alignment at ch7:3053857..3055615+ (Aspergillus niger KJC3)
ATGCCTGCACGGCGCACCTATAGAGCCCCGGCGCGGAATGGCTGTTTTGA
GTGCAGGAACCGGCGAATCAAGTGCCCCAACGAACACCCCCAGTGCTCCC
ATTGCACCAGCGACAACATAATATGTCAATATATTCCCTCCTCCCACTCC
TTGGTCTGGCCTAGGGTCAAGTCTCGCTCCACCACCCCGACCCTTCCCCC
ATCCCGCACCGCCTCCCCTTCCCACATGAACCCCAGGATTCTCGCTGAAT
ACCGCGTCGTCATGGACCCCGTCGCCCCTTCCAATCCCACCGGGGAGCTC
AACATTCAAGACCTCGAGTTGATGATGCAATGGTGCACGACCACATACCG
CTCGGTCTCGCGAAATACCTCGGTAGAGGGAATCTGGCAGGGCGTCGTGC
CGCGGGAAGCCATGCGCCACCCATTCTTGATGCACGGCATCTTGGCTCTC
TCCGCCCTGGACCTGGGCTTCAACTGCCCCTCCGGCCCGCCTAAAGACTA
CTACATCCGAACCGCCCAGGCACATCAGTCCCGGGCTGTGACCGGTCTCG
GCAAGGTCGCCGGATGTCTGGATCAATCCAACTGCAATGCCGCTTTTGCC
TTGTCCAGTATCATGGTGGTCTTTTCCTTCGCCCTCCCTCGGACGACGAA
CAAACACGGGGACGTCCTGAATGAGCTTCTCAACATATTTCGGTTCACAC
GCGGGTCGGTGGACGTCCAAGGAGGAATCATCGATTGGGTCGCGGACGGC
GAATTCAGCCCGCTGCTCGAGTGCGACACCTCGCAGCCAACCATGCCCGA
CACGTCTCGGCTGGCCATCATGTCGCTGACACGAATGAATGCGGACCTCG
CCAGCCGCGATCCCGCGCATGATAAGGCCACGTATGACACGACGATCCGG
TACCTGAGCTACTCGCTGGACAAGCTGGCCCGGGGCGGAGAAACCATGAT
TATTGCCTTCCAGTGGATCTTCCAGATCCCGCCGCGATACTTGGATTTGC
TGCAGCAGAGGCAGCCCTTCGCGTTAGCCATCTTGGCCCATTACGCGGTG
ATTATCCACTCGTTGCGAGGACATTGGTGGATGGGCGAGTGGGGAGCGCG
ACTGATCCGGGAGATCGGCCAGCACCTGGGTGCAGACTGGAGAGACTCAA
TCAGTTGGGTGGTGGACGCGACAGGCTGCTATATTCCTCCAGTCTGAATG
CCTGCACGGCGCACCTATAGAGCCCCGGCGCGGAATGGCTGTTTTGAGTG
CAGGAACCGGCGAATCAAGTGCCCCAACGAACACCCCCAGTGCTCCCATT
GCACCAGCGACAACATAATATGTCAATATATTCCCTCCTCCCACTCCTTG
GTCTGGCCTAGGGTCAAGTCTCGCTCCACCACCCCGACCCTTCCCCCATC
CCGCACCGCCTCCCCTTCCCACATGAACCCCAGGATTCTCGCTGAATACC
GCGTCGTCATGGACCCCGTCGCCCCTTCCAATCCCACCGGGGAGCTCAAC
ATTCAAGACCTCGAGTTGATGATGCAATGGTGCACGACCACATACCGCTC
GGTCTCGCGAAATACCTCGGTAGAGGGAATCTGGCAGGGCGTCGTGCCGC
GGGAAGCCATGCGCCACCCATTCTTGATGCACGGCATCTTGGCTCTCTCC
GCCCTGGACCTGGGCTTCAACTGCCCCTCCGGCCCGCCTAAAGACTACTA
CATCCGAACCGCCCAGGCACATCAGTCCCGGGCTGTGACCGGTCTCGGCA
AGGTCGCCGGATGTCTGGATCAATCCAACTGCAATGCCGCTTTTGCCTTG
TCCAGTATCATGGTGGTCTTTTCCTTCGCCCTCCCTCGGACGACGAACAA
ACACGGGGACGTCCTGAATGAGCTTCTCAACATATTTCGGTTCACACGCG
GGTCGGTGGACGTCCAAGGAGGAATCATCGATTGGGTCGCGGACGGCGAA
TTCAGCCCGCTGCTCGAGTGCGACACCTCGCAGCCAACCATGCCCGACAC
GTCTCGGCTGGCCATCATGTCGCTGACACGAATGAATGCGGACCTCGCCA
GCCGCGATCCCGCGCATGATAAGGCCACGTATGACACGACGATCCGGTAC
CTGAGCTACTCGCTGGACAAGCTGGCCCGGGGCGGAGAAACCATGATTAT
TGCCTTCCAGTGGATCTTCCAGATCCCGCCGCGATACTTGGATTTGCTGC
AGCAGAGGCAGCCCTTCGCGTTAGCCATCTTGGCCCATTACGCGGTGATT
ATCCACTCGTTGCGAGGACATTGGTGGATGGGCGAGTGGGGAGCGCGACT
GATCCGGGAGATCGGCCAGCACCTGGGTGCAGACTGGAGAGACTCAATCA
GTTGGGTGGTGGACGCGACAGGCTGCTATATTCCTCCAGTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3053857..3055615 + |
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