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KJC3_010336-T2, KJC3_010336-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010336-T2
Unique NameKJC3_010336-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3064680..3066386-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010336-T2 ID=KJC3_010336-T2|Name=KJC3_010336-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1707bp|location=Sequence derived from alignment at ch7:3064680..3066386- (Aspergillus niger KJC3)
CAGTGATTGCAAAGTGTCCGGGTTGTTGTAACCGAGCTCTCTTTCTAATT
AATCGAAGTCCTTCCATTTTCTACCTCTATCCCGCTTCCAGTATGGCGTC
TTCTGCAACAATTCGGTCGCTTCAGCGGAAACATCCCCTGCAGCGCCTGT
CCAGCCCGTCTAGAGGCTTCTCGGCCTTGGTCCATGTGAGCACTTATCCG
TGTCGGTCGCTCGTTCCTTGGGCTGATGTTTCTTTCCCCCATGGCAGTCT
CTTGGTCTAGCCAGCTTCTTCTTCTCGTTCAAGTAGTACGTTGAGTTCCG
CTACAGCTCGTGCTCCCCGGTGCTCGGCCCGCCCACTAACCAACCGTTCT
CTAGCATGCACGAGAACCCCAATAGGGCGTAAGCTCCCCATGTCCTTGGC
CTGGAGTAACCAGGATGCTGATTGACCCTTCCTGACAGTAATGAAGCATA
TGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCTGACGCTGGCCACGC
TCACCTTTACCGCCGGTCTGCTGGCGGATATGACGTTATCGGCTCGGCTA
TTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCTCCAATGGAAGTGTT
GATCAGCATCCTATACTGGGGGCTCCGTCTGGTAATTACTTTCCTCATGG
TCGATTAGAATGCCATCTAATTGTCCAACAGATCGACAAGCGTTTGGTTG
TTCCTGATTGGGTGATACTTCCTATGCATGCCGGTAAGCCGGACTCGGAT
CTACTTGAAGTCTCATCTTGCTAATATCGAGTGCAAGACGTCGGCTTCCA
TGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTTCTTTCCCCTC
CTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATCGCT
TTTGGATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCAACGGATGGTA
CGTCTTGTATTTGCCTTTATGGAGATGCGACTTACTGACCGCACAGGTAT
CCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTTGGACTCTT
CGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAATGGC
TCTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCCAGTCTCGT
CCTGGAGCGATCAAAAGCAACGGCAGTATCTAACCGTATATCTTGAGTTG
CGGGGTATGACGGTGGACCTACTGATTCAGACGAGATATAACCCGCCAAG
GTATAGAAGCGATCATATTTGTTACCAGCATATAACACTTCAGCCAATTA
ATACGATATATACGAGTCCTTTACCCCCGAGATATACCATACAATATTAC
GCATCTGTTTCTTCAACCACTAGACTCGATACCCCGCAAGCGCTCTGGAC
CCCCGCATTTTATAGCCGAGCTCATTCAACACCAGGAGCAAATTACATAA
CAGAAATAGTGCCTGCCAAACGACCAGCCTATTCAAGCCTTCTACAGTCC
TTAAATTTTCGGCCCAATCTTCCTTCAGAGAAACTACTCGAACCCCCTAG
TAGTGGTCTCACTCCGCTGCTCACCCAATATCGACTTTGCAATCTTCATC
TTCGCATCCTTTTCGAGCACCAGATCAACCGATCATAACCAGCGAATCTT
TCTCTTCTACAACGCACCACCAATATACGTGGTGATTGAAATGCAACATG
GCGGGAT
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Coding sequence (CDS) from alignment at ch7:3064680..3066386-

>KJC3_010336-T2 ID=KJC3_010336-T2|Name=KJC3_010336-T2|organism=Aspergillus niger KJC3|type=CDS|length=3075bp|location=Sequence derived from alignment at ch7:3064680..3066386- (Aspergillus niger KJC3)
GTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTTGGAC
TCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAA
TGGCTCTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCCAGTC
TCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTAAACGTCGGCTTCCA
TGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTTCTTTCCCCTC
CTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATCGCT
TTTGGATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCAACGGATGATC
GACAAGCGTTTGGTTGTTCCTGATTGGGTGATACTTCCTATGCATGCCGT
AATGAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCTGAC
GCTGGCCACGCTCACCTTTACCGCCGGTCTGCTGGCGGATATGACGTTAT
CGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCTCCA
ATGGAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGATGCACGA
GAACCCCAATAGGGCGTATCCTTACCCCGTCTTCGATGCTGTAGGATTTG
AGGGTCGCGTTGGACTCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGC
ACGGGAACCCTCAAATGGCTCTATGGCCGCGTGAACGGATACGGAACGAG
CGCCAAAGCCCAGTCTCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCT
AAACGTCGGCTTCCATGCTGTACCGTCGATTGTATTACTGATTGACCTTC
TTTTTCTTTCCCCTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTG
TCCAGTACAATCGCTTTTGGATACTGGTTTTGGATCGAACGTTGCTTCCA
GTTCAACGGATGATCGACAAGCGTTTGGTTGTTCCTGATTGGGTGATACT
TCCTATGCATGCCGTAATGAAGCATATGGCTGGCATTTCCAGTACCTGAC
CGTCATTGGGCTGACGCTGGCCACGCTCACCTTTACCGCCGGTCTGCTGG
CGGATATGACGTTATCGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCT
GTATGCAGCGCTCCAATGGAAGTGTTGATCAGCATCCTATACTGGGGGCT
CCGTCTGATGCACGAGAACCCCAATAGGGCGTATCCTTACCCCGTCTTCG
ATGCTGTAGGATTTGAGGGTCGCGTTGGACTCTTCGCCTTGAGCGCCGTT
GTCATGGCGCTGAGCACGGGAACCCTCAAATGGCTCTATGGCCGCGTGAA
CGGATACGGAACGAGCGCCAAAGCCCAGTCTCGTCCTGGAGCGATCAAAA
GCAACGGCAGTATCTAAACGTCGGCTTCCATGCTGTACCGTCGATTGTAT
TACTGATTGACCTTCTTTTTCTTTCCCCTCCTTGGACGATTACTGTTCTC
CCTGCACTAGCTCTGTCCAGTACAATCGCTTTTGGATACTGGTTTTGGAT
CGAACGTTGCTTCCAGTTCAACGGATGATCGACAAGCGTTTGGTTGTTCC
TGATTGGGTGATACTTCCTATGCATGCCGTAATGAAGCATATGGCTGGCA
TTTCCAGTACCTGACCGTCATTGGGCTGACGCTGGCCACGCTCACCTTTA
CCGCCGGTCTGCTGGCGGATATGACGTTATCGGCTCGGCTATTTTTAGCC
AAGAACCTTCTTTCTGTATGCAGCGCTCCAATGGAAGTGTTGATCAGCAT
CCTATACTGGGGGCTCCGTCTGATGCACGAGAACCCCAATAGGGCGTATC
CTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGTCGCGTTGGACTCTTC
GCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGGAACCCTCAAATGGCT
CTATGGCCGCGTGAACGGATACGGAACGAGCGCCAAAGCCCAGTCTCGTC
CTGGAGCGATCAAAAGCAACGGCAGTATCTAAACGTCGGCTTCCATGCTG
TACCGTCGATTGTATTACTGATTGACCTTCTTTTTCTTTCCCCTCCTTGG
ACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAGTACAATCGCTTTTGG
ATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCAACGGATGATCGACAA
GCGTTTGGTTGTTCCTGATTGGGTGATACTTCCTATGCATGCCGTAATGA
AGCATATGGCTGGCATTTCCAGTACCTGACCGTCATTGGGCTGACGCTGG
CCACGCTCACCTTTACCGCCGGTCTGCTGGCGGATATGACGTTATCGGCT
CGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATGCAGCGCTCCAATGGA
AGTGTTGATCAGCATCCTATACTGGGGGCTCCGTCTGATGCACGAGAACC
CCAATAGGGCGTATCCTTACCCCGTCTTCGATGCTGTAGGATTTGAGGGT
CGCGTTGGACTCTTCGCCTTGAGCGCCGTTGTCATGGCGCTGAGCACGGG
AACCCTCAAATGGCTCTATGGCCGCGTGAACGGATACGGAACGAGCGCCA
AAGCCCAGTCTCGTCCTGGAGCGATCAAAAGCAACGGCAGTATCTAAACG
TCGGCTTCCATGCTGTACCGTCGATTGTATTACTGATTGACCTTCTTTTT
CTTTCCCCTCCTTGGACGATTACTGTTCTCCCTGCACTAGCTCTGTCCAG
TACAATCGCTTTTGGATACTGGTTTTGGATCGAACGTTGCTTCCAGTTCA
ACGGATGATCGACAAGCGTTTGGTTGTTCCTGATTGGGTGATACTTCCTA
TGCATGCCGTAATGAAGCATATGGCTGGCATTTCCAGTACCTGACCGTCA
TTGGGCTGACGCTGGCCACGCTCACCTTTACCGCCGGTCTGCTGGCGGAT
ATGACGTTATCGGCTCGGCTATTTTTAGCCAAGAACCTTCTTTCTGTATG
CAGCGCTCCAATGGAAGTGTTGATCAGCATCCTATACTGGGGGCTCCGTC
TGATGCACGAGAACCCCAATAGGGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010336KJC3_010336Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010336-T2KJC3_010336-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010336-T2.cdsKJC3_010336-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010336-T2.utr3p1KJC3_010336-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010336-T2.exon6KJC3_010336-T2.exon6Aspergillus niger KJC3exon
KJC3_010336-T2.exon5KJC3_010336-T2.exon5Aspergillus niger KJC3exon
KJC3_010336-T2.exon4KJC3_010336-T2.exon4Aspergillus niger KJC3exon
KJC3_010336-T2.exon3KJC3_010336-T2.exon3Aspergillus niger KJC3exon
KJC3_010336-T2.exon2KJC3_010336-T2.exon2Aspergillus niger KJC3exon
KJC3_010336-T2.exon1KJC3_010336-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010336-T2.utr5p2KJC3_010336-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_010336-T2.utr5p1KJC3_010336-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006838
DBxrefPFAM:PF04750
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3064680..3066386 -
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