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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3118683..3120339- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010358-T1 ID=KJC3_010358-T1|Name=KJC3_010358-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1657bp|location=Sequence derived from alignment at ch7:3118683..3120339- (Aspergillus niger KJC3)
ATGAGGAGAACTGAAGCTATACTTCTGGTTAGAGGCTACCCTCGGCTACA
GAGTTTCTCTACATTACTGACAGTAGACATGCAGCTGCAGCGCTCCTACC
GTCCCTGGAACAATTCAACCGCAGAATGCAGATCCATTCCTGACCCCGTG
CGGTGGCTATTTATTGACCTCATCCATCCCTCGATGCATCAGCACCTACC
ACAATCAACATGGGTCGACACTTCGCTCTCAGTTGGCTGGCAACATGTCT
GCCCTTGGCCACAGCAACCAACCTCTACGCTACCCACTATGACGGCTCCG
TCTACAGTCTCTCCCTCCAGCGCAGCGACGACACCTACTCCCTGTCCATC
GCCTCCTCACTAAAGACTTGCGGCTCGATGCCCAGCTGGCTGACCTTTGA
CTCGGCCTCGCGCATTCTATACTGCTCTGATGAGTCTGGCGATGCGTCCA
CTAACGGATCTCTGACCACTCTGGCAGCCGACGAGGACGGCACCCTAACG
GAGATAGCCACTGCCGCGGCACCTGGAGGCGGCGTGAACAGTATCTTCTA
TAGCGGTGATGACGGCACTCAGTATTTAGCTATCGCTCACTAGTATGTTC
CTCGACTTCGGCGTGTGGTTGTATCTAACGGTTGCAGTGGTGGCTCCGCG
ATGTCGACATTCCGTCTTCCTTTGAATCAGGGAGATGAGAACCTCCAGGT
TTTCCGCTACACCCTCTCAGAAACCAAACAGAACCCGCAGCAGAATGCGC
CCCATCCTCACCAAGTCCTCCTGGACCCAACTGGATCGTTTATACTCGTG
CCGGATCTGGGAGCGGATCTCGTCCGCGTGTACGCCATCGACAAGTCTAG
CGGTGAATTGGATGGGACCTGTCCTGACCTCTCTTATCCAGAGGGGAGCG
GACCGAGACACGGCCTTTTCTGGCAGACGGAGCACTCTACACTCACCAGA
CAACTCAAGACTCGGCAGCAGGACAGTCAAGTCCTGTACATTGTCGATGA
ATTGGACGGACACTTCAAAGGGTTCACGGTCTCCTACACGTCCGATGGCT
GTCTCGGCTTTGATGAGTTCCAGTCCTTCGAGCCGTACACCGACGGCCAG
CTGCCGGACGGAGCTACGCCATCGGAAATCCGTCAAGCGGGCAATTCCTT
GTATGTGTCGATCCGGAGTGATCAAGGCTTCGCTCCCAACGATTCAATGG
CAAATCTGGACCACTCTTCGAATAACACGATCACCTTGAACGAACTCACC
TCATCGTATGGCACGGTTCCCCGCACTTTTGTGATTAACCAGGCGGGCGA
TTTGGTTGCGATTGGCGATCAATCGTCGTCGAATGTTGCGATCGTAGCGC
GGGACCCGCAGACTGGAAAGCTGGGGGATGAGGTGGCAAATGTGCAGATC
GGCGAACCGGGGGTGGTCGGTACATCGACGGGATTGAGCAGTGTGGTCTG
GGATGAGTAGATATCACTCCAAATATGATAATATGCATTCCTCAGTATCT
GTCAGTAATCTGTCGGTACTATCTGATCGTAGACATCCGTTGCTAAGATA
ATAGCCGATAAGCATTGAAGATCACGGGTCGGCAGTATAAATGGTAGTGA
GGGTAGTACGACAACACCGTTACAGCGGGTGCTTCTCCCGCCACTGCTAA
GTAAGCG back to topCoding sequence (CDS) from alignment at ch7:3118683..3120339- >KJC3_010358-T1 ID=KJC3_010358-T1|Name=KJC3_010358-T1|organism=Aspergillus niger KJC3|type=CDS|length=2412bp|location=Sequence derived from alignment at ch7:3118683..3120339- (Aspergillus niger KJC3)
TGGTGGCTCCGCGATGTCGACATTCCGTCTTCCTTTGAATCAGGGAGATG
AGAACCTCCAGGTTTTCCGCTACACCCTCTCAGAAACCAAACAGAACCCG
CAGCAGAATGCGCCCCATCCTCACCAAGTCCTCCTGGACCCAACTGGATC
GTTTATACTCGTGCCGGATCTGGGAGCGGATCTCGTCCGCGTGTACGCCA
TCGACAAGTCTAGCGGTGAATTGGATGGGACCTGTCCTGACCTCTCTTAT
CCAGAGGGGAGCGGACCGAGACACGGCCTTTTCTGGCAGACGGAGCACTC
TACACTCACCAGACAACTCAAGACTCGGCAGCAGGACAGTCAAGTCCTGT
ACATTGTCGATGAATTGGACGGACACTTCAAAGGGTTCACGGTCTCCTAC
ACGTCCGATGGCTGTCTCGGCTTTGATGAGTTCCAGTCCTTCGAGCCGTA
CACCGACGGCCAGCTGCCGGACGGAGCTACGCCATCGGAAATCCGTCAAG
CGGGCAATTCCTTGTATGTGTCGATCCGGAGTGATCAAGGCTTCGCTCCC
AACGATTCAATGGCAAATCTGGACCACTCTTCGAATAACACGATCACCTT
GAACGAACTCACCTCATCGTATGGCACGGTTCCCCGCACTTTTGTGATTA
ACCAGGCGGGCGATTTGGTTGCGATTGGCGATCAATCGTCGTCGAATGTT
GCGATCGTAGCGCGGGACCCGCAGACTGGAAAGCTGGGGGATGAGGTGGC
AAATGTGCAGATCGGCGAACCGGGGGTGGTCGGTACATCGACGGGATTGA
GCAGTGTGGTCTGGGATGAGTAGATGGGTCGACACTTCGCTCTCAGTTGG
CTGGCAACATGTCTGCCCTTGGCCACAGCAACCAACCTCTACGCTACCCA
CTATGACGGCTCCGTCTACAGTCTCTCCCTCCAGCGCAGCGACGACACCT
ACTCCCTGTCCATCGCCTCCTCACTAAAGACTTGCGGCTCGATGCCCAGC
TGGCTGACCTTTGACTCGGCCTCGCGCATTCTATACTGCTCTGATGAGTC
TGGCGATGCGTCCACTAACGGATCTCTGACCACTCTGGCAGCCGACGAGG
ACGGCACCCTAACGGAGATAGCCACTGCCGCGGCACCTGGAGGCGGCGTG
AACAGTATCTTCTATAGCGGTGATGACGGCACTCAGTATTTAGCTATCGC
TCACTATGGTGGCTCCGCGATGTCGACATTCCGTCTTCCTTTGAATCAGG
GAGATGAGAACCTCCAGGTTTTCCGCTACACCCTCTCAGAAACCAAACAG
AACCCGCAGCAGAATGCGCCCCATCCTCACCAAGTCCTCCTGGACCCAAC
TGGATCGTTTATACTCGTGCCGGATCTGGGAGCGGATCTCGTCCGCGTGT
ACGCCATCGACAAGTCTAGCGGTGAATTGGATGGGACCTGTCCTGACCTC
TCTTATCCAGAGGGGAGCGGACCGAGACACGGCCTTTTCTGGCAGACGGA
GCACTCTACACTCACCAGACAACTCAAGACTCGGCAGCAGGACAGTCAAG
TCCTGTACATTGTCGATGAATTGGACGGACACTTCAAAGGGTTCACGGTC
TCCTACACGTCCGATGGCTGTCTCGGCTTTGATGAGTTCCAGTCCTTCGA
GCCGTACACCGACGGCCAGCTGCCGGACGGAGCTACGCCATCGGAAATCC
GTCAAGCGGGCAATTCCTTGTATGTGTCGATCCGGAGTGATCAAGGCTTC
GCTCCCAACGATTCAATGGCAAATCTGGACCACTCTTCGAATAACACGAT
CACCTTGAACGAACTCACCTCATCGTATGGCACGGTTCCCCGCACTTTTG
TGATTAACCAGGCGGGCGATTTGGTTGCGATTGGCGATCAATCGTCGTCG
AATGTTGCGATCGTAGCGCGGGACCCGCAGACTGGAAAGCTGGGGGATGA
GGTGGCAAATGTGCAGATCGGCGAACCGGGGGTGGTCGGTACATCGACGG
GATTGAGCAGTGTGGTCTGGGATGAGTAGATGGGTCGACACTTCGCTCTC
AGTTGGCTGGCAACATGTCTGCCCTTGGCCACAGCAACCAACCTCTACGC
TACCCACTATGACGGCTCCGTCTACAGTCTCTCCCTCCAGCGCAGCGACG
ACACCTACTCCCTGTCCATCGCCTCCTCACTAAAGACTTGCGGCTCGATG
CCCAGCTGGCTGACCTTTGACTCGGCCTCGCGCATTCTATACTGCTCTGA
TGAGTCTGGCGATGCGTCCACTAACGGATCTCTGACCACTCTGGCAGCCG
ACGAGGACGGCACCCTAACGGAGATAGCCACTGCCGCGGCACCTGGAGGC
GGCGTGAACAGTATCTTCTATAGCGGTGATGACGGCACTCAGTATTTAGC
TATCGCTCACTA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010358-T1.utr3p1 | KJC3_010358-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR019405 |
| DBxref | PFAM:PF10282 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3118683..3120339 - |
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