You are here

Home

KJC3_010367-T1, KJC3_010367-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010367-T1
Unique NameKJC3_010367-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3137233..3138640+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010367-T1 ID=KJC3_010367-T1|Name=KJC3_010367-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1408bp|location=Sequence derived from alignment at ch7:3137233..3138640+ (Aspergillus niger KJC3)
CACTTCCTGCGGCATCTGCGGCGCTGACATGCACGAATCCACCACGGGCC
CCATCTTCTCCCCTCTACCCCTCAACCCCTCCACCAGCACCACTCTCCTC
ATAACCCTATGACCCAAAATCTCCAGCATCATCAACAACAACAACCCCGA
CTTGCATTTCAAACAACGCATGCATCACCATAATGCCCCCCACCAAAACC
CTCCTCATCATCGGCATAACCGGCAACCAAGGCCACTCCATCGCCTCGCG
CTTCCTGCACGACCCAACCTACCACATCATCGGCCTAACCCGCAACCCAA
CCTCGCCCATCGCCCAATCCCTCTCCGCGCAAGGCATCGAGATCCTCCCC
GCCGATCTCAACGACCCCACCACTCTCATCCCCGCCTTCCGCGGCGCGAA
CCTCATCTTCAGTGTTACCAACTACTGGGAGCCGTTCTTCCGCGCAGACT
GTCGCAAACAGGCTGCGGAGCGGGGTATCTCGTGCCGACGGTACGCGTAC
GAGGTGGAGTTGCAGCAGGGGAAGAATATTGCTGATGCGGCTGCCGCGAC
GGTGGACTCGTTGGATGAGAATGGGTTTGTGGTGTCGACGTTGAGTCATG
CGGCGGTGTGTAGTGGGGGACGGTTTGGGGAGTTGTACCATTTTGATGCG
AAGGCGGAGGTGTTTCCGAATTATGTGAGGGAGAGGTATCCCAAGTTGGC
GGGGAAGATGTCGTGTGTACAGACGGGGTATTTCATGACGAGTTATAGGT
TGGTTCCGGGGGCTTATTTTAACAAGGTGAGTTTTGAGGTTTTTGGTTGG
GGGTGTGGCTCGGGGCATTATGTGGCTGATTTATTGTGTTTAGAAGACGA
CGGAGGAAGGGAAGGTGTCATTTGAGATGACTTTTACGACTGCGCCTGAT
GCCAAGGTTCCTCATTTGGATGTTAACGCTGACTTAGGAAACTTTGTCTA
CGCGGTTTCGAAGATGCCACCTGGGAAGAGCTATATGGCTTATGGGTCGT
ATTGTAGCTGGGCAGAGTATATGATAATCTGGGGGAGAGTGAATTCTGTT
CCAGCATCTTATCGGCAAATTACACTTGAGGAACTGATTGAGCAGACTCC
TGATCCGGAGTTTGGGCGAGAGGTGGGCGATATGTTTACTTATTCGACAG
ATCCGGGGTATGACGGCGGTGACAAGGAACTGTTGACGGCAGAGCACATA
CGCAATGTGAGTACCATGTGATGATTTGTTAAAGAATCCACAGCTAATAT
CTACAGGCTGGAATTGAGTGTCCAATGACCAACTTGGAGGAGTGGATGCA
AAAGGAGGATTGGTCGTCTGTCTTAAATAGTTGATAGGCTCTGACTGGTA
GATGTCGCTGTCCAAGTCTTGCTGCCTTACGACCGAGGTTCGGCCGATAT
AATATGAG
back to top

Coding sequence (CDS) from alignment at ch7:3137233..3138640+

>KJC3_010367-T1 ID=KJC3_010367-T1|Name=KJC3_010367-T1|organism=Aspergillus niger KJC3|type=CDS|length=3105bp|location=Sequence derived from alignment at ch7:3137233..3138640+ (Aspergillus niger KJC3)
ATGCCCCCCACCAAAACCCTCCTCATCATCGGCATAACCGGCAACCAAGG
CCACTCCATCGCCTCGCGCTTCCTGCACGACCCAACCTACCACATCATCG
GCCTAACCCGCAACCCAACCTCGCCCATCGCCCAATCCCTCTCCGCGCAA
GGCATCGAGATCCTCCCCGCCGATCTCAACGACCCCACCACTCTCATCCC
CGCCTTCCGCGGCGCGAACCTCATCTTCAGTGTTACCAACTACTGGGAGC
CGTTCTTCCGCGCAGACTGTCGCAAACAGGCTGCGGAGCGGGGTATCTCG
TGCCGACGGTACGCGTACGAGGTGGAGTTGCAGCAGGGGAAGAATATTGC
TGATGCGGCTGCCGCGACGGTGGACTCGTTGGATGAGAATGGGTTTGTGG
TGTCGACGTTGAGTCATGCGGCGGTGTGTAGTGGGGGACGGTTTGGGGAG
TTGTACCATTTTGATGCGAAGGCGGAGGTGTTTCCGAATTATGTGAGGGA
GAGGTATCCCAAGTTGGCGGGGAAGATGTCGTGTGTACAGACGGGGTATT
TCATGACGAGTTATAGGTTGGTTCCGGGGGCTTATTTTAACAAGAAGACG
ACGGAGGAAGGGAAGGTGTCATTTGAGATGACTTTTACGACTGCGCCTGA
TGCCAAGGTTCCTCATTTGGATGTTAACGCTGACTTAGGAAACTTTGTCT
ACGCGGTTTCGAAGATGCCACCTGGGAAGAGCTATATGGCTTATGGGTCG
TATTGTAGCTGGGCAGAGTATATGATAATCTGGGGGAGAGTGAATTCTGT
TCCAGCATCTTATCGGCAAATTACACTTGAGGAACTGATTGAGCAGACTC
CTGATCCGGAGTTTGGGCGAGAGGTGGGCGATATGTTTACTTATTCGACA
GATCCGGGGTATGACGGCGGTGACAAGGAACTGTTGACGGCAGAGCACAT
ACGCAATGCTGGAATTGAGTGTCCAATGACCAACTTGGAGGAGTGGATGC
AAAAGGAGGATTGGTCGTCTGTCTTAAATAGTTGAATGCCCCCCACCAAA
ACCCTCCTCATCATCGGCATAACCGGCAACCAAGGCCACTCCATCGCCTC
GCGCTTCCTGCACGACCCAACCTACCACATCATCGGCCTAACCCGCAACC
CAACCTCGCCCATCGCCCAATCCCTCTCCGCGCAAGGCATCGAGATCCTC
CCCGCCGATCTCAACGACCCCACCACTCTCATCCCCGCCTTCCGCGGCGC
GAACCTCATCTTCAGTGTTACCAACTACTGGGAGCCGTTCTTCCGCGCAG
ACTGTCGCAAACAGGCTGCGGAGCGGGGTATCTCGTGCCGACGGTACGCG
TACGAGGTGGAGTTGCAGCAGGGGAAGAATATTGCTGATGCGGCTGCCGC
GACGGTGGACTCGTTGGATGAGAATGGGTTTGTGGTGTCGACGTTGAGTC
ATGCGGCGGTGTGTAGTGGGGGACGGTTTGGGGAGTTGTACCATTTTGAT
GCGAAGGCGGAGGTGTTTCCGAATTATGTGAGGGAGAGGTATCCCAAGTT
GGCGGGGAAGATGTCGTGTGTACAGACGGGGTATTTCATGACGAGTTATA
GGTTGGTTCCGGGGGCTTATTTTAACAAGAAGACGACGGAGGAAGGGAAG
GTGTCATTTGAGATGACTTTTACGACTGCGCCTGATGCCAAGGTTCCTCA
TTTGGATGTTAACGCTGACTTAGGAAACTTTGTCTACGCGGTTTCGAAGA
TGCCACCTGGGAAGAGCTATATGGCTTATGGGTCGTATTGTAGCTGGGCA
GAGTATATGATAATCTGGGGGAGAGTGAATTCTGTTCCAGCATCTTATCG
GCAAATTACACTTGAGGAACTGATTGAGCAGACTCCTGATCCGGAGTTTG
GGCGAGAGGTGGGCGATATGTTTACTTATTCGACAGATCCGGGGTATGAC
GGCGGTGACAAGGAACTGTTGACGGCAGAGCACATACGCAATGCTGGAAT
TGAGTGTCCAATGACCAACTTGGAGGAGTGGATGCAAAAGGAGGATTGGT
CGTCTGTCTTAAATAGTTGAATGCCCCCCACCAAAACCCTCCTCATCATC
GGCATAACCGGCAACCAAGGCCACTCCATCGCCTCGCGCTTCCTGCACGA
CCCAACCTACCACATCATCGGCCTAACCCGCAACCCAACCTCGCCCATCG
CCCAATCCCTCTCCGCGCAAGGCATCGAGATCCTCCCCGCCGATCTCAAC
GACCCCACCACTCTCATCCCCGCCTTCCGCGGCGCGAACCTCATCTTCAG
TGTTACCAACTACTGGGAGCCGTTCTTCCGCGCAGACTGTCGCAAACAGG
CTGCGGAGCGGGGTATCTCGTGCCGACGGTACGCGTACGAGGTGGAGTTG
CAGCAGGGGAAGAATATTGCTGATGCGGCTGCCGCGACGGTGGACTCGTT
GGATGAGAATGGGTTTGTGGTGTCGACGTTGAGTCATGCGGCGGTGTGTA
GTGGGGGACGGTTTGGGGAGTTGTACCATTTTGATGCGAAGGCGGAGGTG
TTTCCGAATTATGTGAGGGAGAGGTATCCCAAGTTGGCGGGGAAGATGTC
GTGTGTACAGACGGGGTATTTCATGACGAGTTATAGGTTGGTTCCGGGGG
CTTATTTTAACAAGAAGACGACGGAGGAAGGGAAGGTGTCATTTGAGATG
ACTTTTACGACTGCGCCTGATGCCAAGGTTCCTCATTTGGATGTTAACGC
TGACTTAGGAAACTTTGTCTACGCGGTTTCGAAGATGCCACCTGGGAAGA
GCTATATGGCTTATGGGTCGTATTGTAGCTGGGCAGAGTATATGATAATC
TGGGGGAGAGTGAATTCTGTTCCAGCATCTTATCGGCAAATTACACTTGA
GGAACTGATTGAGCAGACTCCTGATCCGGAGTTTGGGCGAGAGGTGGGCG
ATATGTTTACTTATTCGACAGATCCGGGGTATGACGGCGGTGACAAGGAA
CTGTTGACGGCAGAGCACATACGCAATGCTGGAATTGAGTGTCCAATGAC
CAACTTGGAGGAGTGGATGCAAAAGGAGGATTGGTCGTCTGTCTTAAATA
GTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010367KJC3_010367Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010367-T1KJC3_010367-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010367-T1.utr5p1KJC3_010367-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010367-T1.exon1KJC3_010367-T1.exon1Aspergillus niger KJC3exon
KJC3_010367-T1.exon2KJC3_010367-T1.exon2Aspergillus niger KJC3exon
KJC3_010367-T1.exon3KJC3_010367-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010367-T1.cdsKJC3_010367-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010367-T1.utr3p1KJC3_010367-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_7.8
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3137233..3138640 +
Powered by Drupal