You are here

Home

KJC3_010370-T2, KJC3_010370-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010370-T2
Unique NameKJC3_010370-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3146777..3148227+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010370-T2 ID=KJC3_010370-T2|Name=KJC3_010370-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1451bp|location=Sequence derived from alignment at ch7:3146777..3148227+ (Aspergillus niger KJC3)
CATAACCCCCAACCTCCGATATTTGTTGCTTCCTAATTACTATACTTGCC
AAAAGTTCCTTACTATGGCCTCACCAAGTCCCTTTTGGGGCCCATCTACT
TCACATGCCAAGTTAGTATAAAGGTCATGAACCAAGTGCAAGCTAACGTT
TCAAAGTTTCTGCGAGGAGGTAATTCGCTGTATTTCAAAGCAAAGAAGAT
TTATACGTCAGAGCTTCTAACAGGAACAACACAGGACTACGTGGTCACCA
GATACATTGCCGAGTTTATCAACACTCTTACCAATCTCGTGTACAGTATG
TCGCGACCTGCCGCTTCTACAAATAAATCTCATAAACAACCCAGTATTCT
ACGCAATATACGGAATTCGCCATCTGCATCGACAATCGAATAAGGATGTC
TTCCGCGCCCTTCCCTATTGGGGCTTGATGGGTGTGGGTATTGCCTCTGC
AGCTTTCCACATGAACCTCAAGTACCATACCCAAATGAGTAAGTATCAAT
TTTCTGCTTCACTTTTGAGATGGGCTCGCTGCTGAAAAAAGCTAAAACAG
TGGACGATGCATCCATGCTCCTCACCACAACCCCGGTGCTCCACCGCGTC
ATGACCGTGAACACCAGTCGCAGAACCTCGACTATTTTGGCAATTCTGCT
AAGCGCAGCTCTTCTGGGACTCGTAGTAGTCCACGTACTGACAGACGAGC
TCATCTTACACTCCGTCAGTTTCGTAGTCAGCGTGACGATCATTGGAGTC
CGTACGATGCAGCTAATCACTACCCGTACGCCAAAGAATTCTCTCGCTCG
GCGGCAGATCTGGGGTATGGTGAGATTTGGAGCTGGTAAGTCCAAAGCCC
CCACCTATCCTTTTCCATGTTTTCAGAACATTGACTGCAAAAGCTATATT
TGAGCTGGGATTCCTCGTCTGGGTAGTTGACGGGTGGGTATGTGGATGGT
TGAGAAGCTCGCGGGCAGCTATTGGTCTACCGTGGGCGTTTCTACTTGAA
CTACATGGATGGTATGTAGCATTTTGCTTTATCCGTCCTGATTCTTATTA
ACCCCGGGCTGATTATGGATATGAAACAGGTGGCACATCTGCACGGGAAT
TGGAGCCTACATATTCATCGCGGTCATTGATCACCTGGTGTCTGGGGAAG
ATGTTGAGGCCATTGAGTACTCATTTGCCTGGCCTGCACCATGGGCTTCT
CGTTCTATCTTTGCGGGAAAAGGTTCAGCAGTGGGTGTCAGGTCGGAGTT
AAAGACAGAGTGAGGCGAGAGCTCTATATGGGGGGTTCGAGGCGGGAGAC
GAAGGGATCAAGCATCAGATATGCTCCTAAGCCAAGCTTTAAGCTCAAAC
TCTTCAACCACTCAAGCTATGACGGTTTCCATGTTTAAGAACATTCTGTA
CAGTCATAGCAATGATTGATGAATCCGAAATAGGAGATAAGCTTGCACCG
G
back to top

Coding sequence (CDS) from alignment at ch7:3146777..3148227+

>KJC3_010370-T2 ID=KJC3_010370-T2|Name=KJC3_010370-T2|organism=Aspergillus niger KJC3|type=CDS|length=2592bp|location=Sequence derived from alignment at ch7:3146777..3148227+ (Aspergillus niger KJC3)
ATGGGTGTGGGTATTGCCTCTGCAGCTTTCCACATGAACCTCAAGTACCA
TACCCAAATGATGGACGATGCATCCATGCTCCTCACCACAACCCCGGTGC
TCCACCGCGTCATGACCGTGAACACCAGTCGCAGAACCTCGACTATTTTG
GCAATTCTGCTAAGCGCAGCTCTTCTGGGACTCGTAGTAGTCCACGTACT
GACAGACGAGCTCATCTTACACTCCGTCAGTTTCGTAGTCAGCGTGACGA
TCATTGGAGTCCGTACGATGCAGCTAATCACTACCCGTACGCCAAAGAAT
TCTCTCGCTCGGCGGCAGATCTGGGGTATGGTGAGATTTGGAGCTGCTAT
ATTTGAGCTGGGATTCCTCGTCTGGGTAGTTGACGGGTGGGTATGTGGAT
GGTTGAGAAGCTCGCGGGCAGCTATTGGTCTACCGTGGGCGTTTCTACTT
GAACTACATGGATGGTGGCACATCTGCACGGGAATTGGAGCCTACATATT
CATCGCGGTCATTGATCACCTGGTGTCTGGGGAAGATGTTGAGGCCATTG
AGTACTCATTTGCCTGGCCTGCACCATGGGCTTCTCGTTCTATCTTTGCG
GGAAAAGGTTCAGCAGTGGGTGTCAGGTCGGAGTTAAAGACAGAGTGAAT
GGGTGTGGGTATTGCCTCTGCAGCTTTCCACATGAACCTCAAGTACCATA
CCCAAATGATGGACGATGCATCCATGCTCCTCACCACAACCCCGGTGCTC
CACCGCGTCATGACCGTGAACACCAGTCGCAGAACCTCGACTATTTTGGC
AATTCTGCTAAGCGCAGCTCTTCTGGGACTCGTAGTAGTCCACGTACTGA
CAGACGAGCTCATCTTACACTCCGTCAGTTTCGTAGTCAGCGTGACGATC
ATTGGAGTCCGTACGATGCAGCTAATCACTACCCGTACGCCAAAGAATTC
TCTCGCTCGGCGGCAGATCTGGGGTATGGTGAGATTTGGAGCTGCTATAT
TTGAGCTGGGATTCCTCGTCTGGGTAGTTGACGGGTGGGTATGTGGATGG
TTGAGAAGCTCGCGGGCAGCTATTGGTCTACCGTGGGCGTTTCTACTTGA
ACTACATGGATGGTGGCACATCTGCACGGGAATTGGAGCCTACATATTCA
TCGCGGTCATTGATCACCTGGTGTCTGGGGAAGATGTTGAGGCCATTGAG
TACTCATTTGCCTGGCCTGCACCATGGGCTTCTCGTTCTATCTTTGCGGG
AAAAGGTTCAGCAGTGGGTGTCAGGTCGGAGTTAAAGACAGAGTGAATGG
GTGTGGGTATTGCCTCTGCAGCTTTCCACATGAACCTCAAGTACCATACC
CAAATGATGGACGATGCATCCATGCTCCTCACCACAACCCCGGTGCTCCA
CCGCGTCATGACCGTGAACACCAGTCGCAGAACCTCGACTATTTTGGCAA
TTCTGCTAAGCGCAGCTCTTCTGGGACTCGTAGTAGTCCACGTACTGACA
GACGAGCTCATCTTACACTCCGTCAGTTTCGTAGTCAGCGTGACGATCAT
TGGAGTCCGTACGATGCAGCTAATCACTACCCGTACGCCAAAGAATTCTC
TCGCTCGGCGGCAGATCTGGGGTATGGTGAGATTTGGAGCTGCTATATTT
GAGCTGGGATTCCTCGTCTGGGTAGTTGACGGGTGGGTATGTGGATGGTT
GAGAAGCTCGCGGGCAGCTATTGGTCTACCGTGGGCGTTTCTACTTGAAC
TACATGGATGGTGGCACATCTGCACGGGAATTGGAGCCTACATATTCATC
GCGGTCATTGATCACCTGGTGTCTGGGGAAGATGTTGAGGCCATTGAGTA
CTCATTTGCCTGGCCTGCACCATGGGCTTCTCGTTCTATCTTTGCGGGAA
AAGGTTCAGCAGTGGGTGTCAGGTCGGAGTTAAAGACAGAGTGAATGGGT
GTGGGTATTGCCTCTGCAGCTTTCCACATGAACCTCAAGTACCATACCCA
AATGATGGACGATGCATCCATGCTCCTCACCACAACCCCGGTGCTCCACC
GCGTCATGACCGTGAACACCAGTCGCAGAACCTCGACTATTTTGGCAATT
CTGCTAAGCGCAGCTCTTCTGGGACTCGTAGTAGTCCACGTACTGACAGA
CGAGCTCATCTTACACTCCGTCAGTTTCGTAGTCAGCGTGACGATCATTG
GAGTCCGTACGATGCAGCTAATCACTACCCGTACGCCAAAGAATTCTCTC
GCTCGGCGGCAGATCTGGGGTATGGTGAGATTTGGAGCTGCTATATTTGA
GCTGGGATTCCTCGTCTGGGTAGTTGACGGGTGGGTATGTGGATGGTTGA
GAAGCTCGCGGGCAGCTATTGGTCTACCGTGGGCGTTTCTACTTGAACTA
CATGGATGGTGGCACATCTGCACGGGAATTGGAGCCTACATATTCATCGC
GGTCATTGATCACCTGGTGTCTGGGGAAGATGTTGAGGCCATTGAGTACT
CATTTGCCTGGCCTGCACCATGGGCTTCTCGTTCTATCTTTGCGGGAAAA
GGTTCAGCAGTGGGTGTCAGGTCGGAGTTAAAGACAGAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016811hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
Vocabulary: Biological Process
TermDefinition
GO:0006672ceramide metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010370KJC3_010370Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010370-T2KJC3_010370-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010370-T2.utr5p1KJC3_010370-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_010370-T2.utr5p2KJC3_010370-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_010370-T2.utr5p3KJC3_010370-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010370-T2.exon1KJC3_010370-T2.exon1Aspergillus niger KJC3exon
KJC3_010370-T2.exon2KJC3_010370-T2.exon2Aspergillus niger KJC3exon
KJC3_010370-T2.exon3KJC3_010370-T2.exon3Aspergillus niger KJC3exon
KJC3_010370-T2.exon4KJC3_010370-T2.exon4Aspergillus niger KJC3exon
KJC3_010370-T2.exon5KJC3_010370-T2.exon5Aspergillus niger KJC3exon
KJC3_010370-T2.exon6KJC3_010370-T2.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010370-T2.cdsKJC3_010370-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010370-T2.utr3p1KJC3_010370-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_7.8
DBxrefInterPro:IPR008901
DBxrefPFAM:PF05875
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3146777..3148227 +
Powered by Drupal