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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3189465..3191353+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010385-T1 ID=KJC3_010385-T1|Name=KJC3_010385-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1889bp|location=Sequence derived from alignment at ch7:3189465..3191353+ (Aspergillus niger KJC3)
CATGTCGACGACCACCACTGCTGTCACCAGTGAGGTCGGCTCACTACGCC
TCTCCGCCGAGGAAGTCCGACTTCCAGCTCCTCGCGATGACCGAAAGTCG
CGCTTACAACAAGTCGTCGTGATCACCCAGCTGTTTGCCGTCACTCTCAC
AGCCAGTGTAATCAATGGCTTGGTGGTAGTCGGACTCCCCACCATCACTG
CAGACCTCCAGCTGCCTCCTTCGCTTTCCCTCTGGCCCTCCTCGGTATGC
AGTCTCGCCACGGCCTCTACACTTCTTCTATCCGGCTCAATTGCCGACAC
CATCGGCCCTCGATGGGTGGAACTGGTGGGATCTCTCGCCAGCGGTGCAT
TGATGCTCGGACAGGGCCTATCGCAAACTGGCATTGAGCTGGTCATCATG
CGAGCCTTCCAAGGTGTGGGCCTCTCAATGCACCTTGCATCATCGGTGTC
CATCGTCACCCAGCTTTTACCTCCTGGAAAAGGCCGTAACCTGGCATTCT
CCTGCATAGGCCTGAGCCAGCCATTGGGCTTCTCACTGGGTCTAGTAGTA
GGCGGCATCCTGATCGACACTATCGGCTGGCGCGCAGGCTGGTACATCGC
CGGGGGAATCACTCTCTTCTTCACCGTCATCGGACTGTGGTCGTTACCCA
AGAGCCCTGTCCAGCGAGACGGACACATCCTCCGCAATGTGCGGACTAAG
ATCGACTGGGTGGGAGCTGGACTAGCATCAGCATTCATGGCCTTGCTCTG
CTACTTGCTCGCGTGAGTATCCCCTAAAACCTCAAAAGCCAACACTCTAC
CCCAATCTAACCCATATACCCCAACACAGCATCCTCAGCGCAAACCCCTC
CCGCATCCGCTCCGCAGAAAGCATCATCATCCTCTGCGTCGCCGCCATCG
CCCTCCCCACCTTCATCACCTGGGTGCACTTCCAAGTAAAGCGCGGCAAA
CCAGCATTAATCCCCAACGCACTATGGAAAAACACCTCTTTCTCGAGCAT
CTGCGCCACAGTGGCCCTCTCCAACGCCGTAATCAACTCCATGGAACTCT
TCGCCAGTCTATTGTACGTCCCCCAATCCCCAACCCCACACACCCATTCC
CCAAAACCCACTAACAAAACCACCCTCAAACCAGCTTCCAAGAAATCCAG
TCCCTCAGCGCCCTCGGCGCCTCCATCCGCATCCTCCCCAGCCTAATCGT
CGGGGTCCTAATCAACCTCGTAATTGGCTTCTTCGTGCACCGCATCCCCG
CCTACTGGATCGTAACCATCACCTCCTTCTTCTGCGCCCTCTCCCCGCTC
CTCATGGCCGTCATCGACCCAACCCAGACATACTGGGCGAATGCCTTCGT
CGCGCAGCTCCTGCAGCCTATCAGCGCGGACGCGCTCTTCACGGTGGGGT
TGATCGTCATCACGAATGTGTTTCCGGATGATACGCAGGCGTTGGCGGGA
GCGGTGTTTAATACCTCGGCGCAGTTTGGGAGTGCGTTGGGCATGGCGGT
GTTGCAGGTGATTTCGACGGTGGTGAGTGAAGAGAGGGAAAAGGGTGGGG
AGGGAGAGAAGAAGGCGTTGATGGAGGGATATCGGGCGAGTTTTTGGACC
ATGTTTGGGTTGATGGTGGTTTGTACGGCGGTTGGGTTTTGGGGGTTGAG
GAGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAGTTTATTGGTGCAGTTT
CTAGGTATGTTGTTTGTTATCTGGGTGTAAATTATAGATTGTGGACTTTG
CTTTGGGGTGTTGGATTGGGAAAAGTGTCTTTATTGCTTCTTCTTTAGAC
TGGGATGTTCTTGCTCTTAGGGTTACTGTGGATCTGCAGGAAATGGCTTG
CAGAGATGAAAATGATAGACTATGACAGTTATGATTAAG back to topCoding sequence (CDS) from alignment at ch7:3189465..3191353+ >KJC3_010385-T1 ID=KJC3_010385-T1|Name=KJC3_010385-T1|organism=Aspergillus niger KJC3|type=CDS|length=4635bp|location=Sequence derived from alignment at ch7:3189465..3191353+ (Aspergillus niger KJC3)
ATGTCGACGACCACCACTGCTGTCACCAGTGAGGTCGGCTCACTACGCCT
CTCCGCCGAGGAAGTCCGACTTCCAGCTCCTCGCGATGACCGAAAGTCGC
GCTTACAACAAGTCGTCGTGATCACCCAGCTGTTTGCCGTCACTCTCACA
GCCAGTGTAATCAATGGCTTGGTGGTAGTCGGACTCCCCACCATCACTGC
AGACCTCCAGCTGCCTCCTTCGCTTTCCCTCTGGCCCTCCTCGGTATGCA
GTCTCGCCACGGCCTCTACACTTCTTCTATCCGGCTCAATTGCCGACACC
ATCGGCCCTCGATGGGTGGAACTGGTGGGATCTCTCGCCAGCGGTGCATT
GATGCTCGGACAGGGCCTATCGCAAACTGGCATTGAGCTGGTCATCATGC
GAGCCTTCCAAGGTGTGGGCCTCTCAATGCACCTTGCATCATCGGTGTCC
ATCGTCACCCAGCTTTTACCTCCTGGAAAAGGCCGTAACCTGGCATTCTC
CTGCATAGGCCTGAGCCAGCCATTGGGCTTCTCACTGGGTCTAGTAGTAG
GCGGCATCCTGATCGACACTATCGGCTGGCGCGCAGGCTGGTACATCGCC
GGGGGAATCACTCTCTTCTTCACCGTCATCGGACTGTGGTCGTTACCCAA
GAGCCCTGTCCAGCGAGACGGACACATCCTCCGCAATGTGCGGACTAAGA
TCGACTGGGTGGGAGCTGGACTAGCATCAGCATTCATGGCCTTGCTCTGC
TACTTGCTCGCCATCCTCAGCGCAAACCCCTCCCGCATCCGCTCCGCAGA
AAGCATCATCATCCTCTGCGTCGCCGCCATCGCCCTCCCCACCTTCATCA
CCTGGGTGCACTTCCAAGTAAAGCGCGGCAAACCAGCATTAATCCCCAAC
GCACTATGGAAAAACACCTCTTTCTCGAGCATCTGCGCCACAGTGGCCCT
CTCCAACGCCGTAATCAACTCCATGGAACTCTTCGCCAGTCTATTCTTCC
AAGAAATCCAGTCCCTCAGCGCCCTCGGCGCCTCCATCCGCATCCTCCCC
AGCCTAATCGTCGGGGTCCTAATCAACCTCGTAATTGGCTTCTTCGTGCA
CCGCATCCCCGCCTACTGGATCGTAACCATCACCTCCTTCTTCTGCGCCC
TCTCCCCGCTCCTCATGGCCGTCATCGACCCAACCCAGACATACTGGGCG
AATGCCTTCGTCGCGCAGCTCCTGCAGCCTATCAGCGCGGACGCGCTCTT
CACGGTGGGGTTGATCGTCATCACGAATGTGTTTCCGGATGATACGCAGG
CGTTGGCGGGAGCGGTGTTTAATACCTCGGCGCAGTTTGGGAGTGCGTTG
GGCATGGCGGTGTTGCAGGTGATTTCGACGGTGGTGAGTGAAGAGAGGGA
AAAGGGTGGGGAGGGAGAGAAGAAGGCGTTGATGGAGGGATATCGGGCGA
GTTTTTGGACCATGTTTGGGTTGATGGTGGTTTGTACGGCGGTTGGGTTT
TGGGGGTTGAGGAGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAGATGTC
GACGACCACCACTGCTGTCACCAGTGAGGTCGGCTCACTACGCCTCTCCG
CCGAGGAAGTCCGACTTCCAGCTCCTCGCGATGACCGAAAGTCGCGCTTA
CAACAAGTCGTCGTGATCACCCAGCTGTTTGCCGTCACTCTCACAGCCAG
TGTAATCAATGGCTTGGTGGTAGTCGGACTCCCCACCATCACTGCAGACC
TCCAGCTGCCTCCTTCGCTTTCCCTCTGGCCCTCCTCGGTATGCAGTCTC
GCCACGGCCTCTACACTTCTTCTATCCGGCTCAATTGCCGACACCATCGG
CCCTCGATGGGTGGAACTGGTGGGATCTCTCGCCAGCGGTGCATTGATGC
TCGGACAGGGCCTATCGCAAACTGGCATTGAGCTGGTCATCATGCGAGCC
TTCCAAGGTGTGGGCCTCTCAATGCACCTTGCATCATCGGTGTCCATCGT
CACCCAGCTTTTACCTCCTGGAAAAGGCCGTAACCTGGCATTCTCCTGCA
TAGGCCTGAGCCAGCCATTGGGCTTCTCACTGGGTCTAGTAGTAGGCGGC
ATCCTGATCGACACTATCGGCTGGCGCGCAGGCTGGTACATCGCCGGGGG
AATCACTCTCTTCTTCACCGTCATCGGACTGTGGTCGTTACCCAAGAGCC
CTGTCCAGCGAGACGGACACATCCTCCGCAATGTGCGGACTAAGATCGAC
TGGGTGGGAGCTGGACTAGCATCAGCATTCATGGCCTTGCTCTGCTACTT
GCTCGCCATCCTCAGCGCAAACCCCTCCCGCATCCGCTCCGCAGAAAGCA
TCATCATCCTCTGCGTCGCCGCCATCGCCCTCCCCACCTTCATCACCTGG
GTGCACTTCCAAGTAAAGCGCGGCAAACCAGCATTAATCCCCAACGCACT
ATGGAAAAACACCTCTTTCTCGAGCATCTGCGCCACAGTGGCCCTCTCCA
ACGCCGTAATCAACTCCATGGAACTCTTCGCCAGTCTATTCTTCCAAGAA
ATCCAGTCCCTCAGCGCCCTCGGCGCCTCCATCCGCATCCTCCCCAGCCT
AATCGTCGGGGTCCTAATCAACCTCGTAATTGGCTTCTTCGTGCACCGCA
TCCCCGCCTACTGGATCGTAACCATCACCTCCTTCTTCTGCGCCCTCTCC
CCGCTCCTCATGGCCGTCATCGACCCAACCCAGACATACTGGGCGAATGC
CTTCGTCGCGCAGCTCCTGCAGCCTATCAGCGCGGACGCGCTCTTCACGG
TGGGGTTGATCGTCATCACGAATGTGTTTCCGGATGATACGCAGGCGTTG
GCGGGAGCGGTGTTTAATACCTCGGCGCAGTTTGGGAGTGCGTTGGGCAT
GGCGGTGTTGCAGGTGATTTCGACGGTGGTGAGTGAAGAGAGGGAAAAGG
GTGGGGAGGGAGAGAAGAAGGCGTTGATGGAGGGATATCGGGCGAGTTTT
TGGACCATGTTTGGGTTGATGGTGGTTTGTACGGCGGTTGGGTTTTGGGG
GTTGAGGAGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAGATGTCGACGA
CCACCACTGCTGTCACCAGTGAGGTCGGCTCACTACGCCTCTCCGCCGAG
GAAGTCCGACTTCCAGCTCCTCGCGATGACCGAAAGTCGCGCTTACAACA
AGTCGTCGTGATCACCCAGCTGTTTGCCGTCACTCTCACAGCCAGTGTAA
TCAATGGCTTGGTGGTAGTCGGACTCCCCACCATCACTGCAGACCTCCAG
CTGCCTCCTTCGCTTTCCCTCTGGCCCTCCTCGGTATGCAGTCTCGCCAC
GGCCTCTACACTTCTTCTATCCGGCTCAATTGCCGACACCATCGGCCCTC
GATGGGTGGAACTGGTGGGATCTCTCGCCAGCGGTGCATTGATGCTCGGA
CAGGGCCTATCGCAAACTGGCATTGAGCTGGTCATCATGCGAGCCTTCCA
AGGTGTGGGCCTCTCAATGCACCTTGCATCATCGGTGTCCATCGTCACCC
AGCTTTTACCTCCTGGAAAAGGCCGTAACCTGGCATTCTCCTGCATAGGC
CTGAGCCAGCCATTGGGCTTCTCACTGGGTCTAGTAGTAGGCGGCATCCT
GATCGACACTATCGGCTGGCGCGCAGGCTGGTACATCGCCGGGGGAATCA
CTCTCTTCTTCACCGTCATCGGACTGTGGTCGTTACCCAAGAGCCCTGTC
CAGCGAGACGGACACATCCTCCGCAATGTGCGGACTAAGATCGACTGGGT
GGGAGCTGGACTAGCATCAGCATTCATGGCCTTGCTCTGCTACTTGCTCG
CCATCCTCAGCGCAAACCCCTCCCGCATCCGCTCCGCAGAAAGCATCATC
ATCCTCTGCGTCGCCGCCATCGCCCTCCCCACCTTCATCACCTGGGTGCA
CTTCCAAGTAAAGCGCGGCAAACCAGCATTAATCCCCAACGCACTATGGA
AAAACACCTCTTTCTCGAGCATCTGCGCCACAGTGGCCCTCTCCAACGCC
GTAATCAACTCCATGGAACTCTTCGCCAGTCTATTCTTCCAAGAAATCCA
GTCCCTCAGCGCCCTCGGCGCCTCCATCCGCATCCTCCCCAGCCTAATCG
TCGGGGTCCTAATCAACCTCGTAATTGGCTTCTTCGTGCACCGCATCCCC
GCCTACTGGATCGTAACCATCACCTCCTTCTTCTGCGCCCTCTCCCCGCT
CCTCATGGCCGTCATCGACCCAACCCAGACATACTGGGCGAATGCCTTCG
TCGCGCAGCTCCTGCAGCCTATCAGCGCGGACGCGCTCTTCACGGTGGGG
TTGATCGTCATCACGAATGTGTTTCCGGATGATACGCAGGCGTTGGCGGG
AGCGGTGTTTAATACCTCGGCGCAGTTTGGGAGTGCGTTGGGCATGGCGG
TGTTGCAGGTGATTTCGACGGTGGTGAGTGAAGAGAGGGAAAAGGGTGGG
GAGGGAGAGAAGAAGGCGTTGATGGAGGGATATCGGGCGAGTTTTTGGAC
CATGTTTGGGTTGATGGTGGTTTGTACGGCGGTTGGGTTTTGGGGGTTGA
GGAGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010385-T1.utr5p1 | KJC3_010385-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010385-T1.utr3p1 | KJC3_010385-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.9 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3189465..3191353 + |
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