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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3202376..3204777- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010387-T1 ID=KJC3_010387-T1|Name=KJC3_010387-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2402bp|location=Sequence derived from alignment at ch7:3202376..3204777- (Aspergillus niger KJC3)
GTCGCAGCTAATCACCTCCCCGTAAAATAATGACGACGAGAATTCCTAGG
GATGATGATACGCCCCTCCCAACCCAGTCGGTGGATCCAGATGGCTGATT
TGGCCGAAGCGCTGTCTCCGTATGGCTGCAACCCAGGATAAACACCTCCT
TGTCGGTGGTACGCCTTCTCCCCCTCGTCCGCTGGACCTTACCGCCACTG
TACTCTGCTGAAGAAAGCTTGTTATATATGGTCCTCTTCGCCTCCCTTCT
CTTTCTTTTCCATCTTCATCCTTCTCTTTCACATCATCTTCCTCTTCCAT
CTTCCTCCGGTGACAATTGCCTGCAGGTGACGCCCGTTGGTTGTCTTCCT
GTTTTCGTCTCCGAGTGATATCATCCTATCCTATCTTATCTTAGTCTTCC
TCCCTCTCCCTCTTATATCCTCACCCACCTTTGTTTCTCTCAATTGAACC
TCCTCCACAACCTCAGTTCCTTCCAGCAATTCATCATGCCTCGCTTCGAC
GACGCCGACTTTGCCGTGGACGCTGCCCCTGCCCCGGGTGCCCGCTCCCC
CCGGGATGCTCGTGGTAGCGCTGCTGGCTCTCTGCCCATCCCTAACGATG
CTGGCAACACTGTTGAGATCCCCGCTACTCGCAGCTCCATCAGCGATGCT
GCTCAGTACATGCACAACCTGAGCTTTGCTCCCTCCTCCCGGGACCGTCG
TGGCTCCCGCAACTCCTTCGGCACTTCCCTGCCCATCCCCAGATCTCCCC
GTGTCTCCCGTCTTTCCTCGGTGGTCACTGCGGATGTATCCCGCGACATC
CTGGCCTCTCAGGTCCAGGACATGTCCAAGGAGAAGGTCGCTGCTGCCAA
GAACATGGCCTTCGCTTTCGATATCGATGGTGTCTTGGCCCACGGTAACG
AGGCCATTCCCGAGGCCAAGGAGGCCCTCGCGATGCTCAACGGTGACAAC
GAGCTGGGCATCAAGATCCCCTACATTCTCCTGACCAACGGTGGTGGTAA
GACTGAGGATGAGCGCTGCGCCCAGCTCACCGAGGTCCTTGGCTGCCCCA
TCTCCACCGACCAGTTCATCCAGTCTCACACCCCAATGCAGGCGTTGGCC
GAGTACTACGAAACCGTCCTGGTCTGCGGTGGTGAGGGTCAGAAGATCCG
CAAGGTCGCTGAGAACTATGGCTTCAAGAACGTCATCCACCCCAAGGATA
TCCTCGCCTGGGACCAAACCATCTCCCCCTGGGGCTGCTTCCACGAGGAG
GACCGTCTCCAGGCCAAGCCCCGCGACTTCTCTAAGATCAAGTTCGATGC
TATCCTGGTGTTCGCCGACTCCCGCGACTACGCCACTGACATGCAGCTCA
TCATGGATCTCCTCCTGGCTGAGGACGGAAAGCTGCTGACCCGCGCCAAG
GACCCCGTTGCCTCCCGCATCCCGGTCTACTTCTCCCAGGGTGACCTGGT
CTTCCCTACCGACCACAAGGGTCCCCCCCGTCTGACCCAGGGTCTCTTCC
GTATCTCCATTGAGGCTCAGTACAAGGCCCTCACCGGTGTCGACCTGGAG
CGTGTCGTCTACGGCAAGCCCGAGCGCGCCACTTACACCTACGCCGATGA
GGTCATGAAGGCCTGGATGGAGCAGATCCACAACGAGAACCGCCTGCCCG
AGAACATCTACATGGTCGGTGACAACCCGGCCTCCGACATCTGCGGTGGT
AACATGCACGGCTGGAACACCTGTCTGGTGCGCACCGGTGTCTTCCAGGG
CAAGGACAACGACGACAACAACCCGGCCAACTTCGGTGTCTTCCCCAACG
TCCTGGAGGCTGTCAAGGCCGCCGTCCGCAAGGAGCTCGGCCAGGACTTC
AAGTTCAAGTGGAACCCCAAGGTCAACCCCGTCCTCCACGGCGACGGTGC
CTCTGCTGTCGAGTAAACGCATTAAAAATCGGCGCTTGCTTATTCCTTTC
TCCCCACACCTCTTTTTCACCCATTTTGTTCACATCTTGATCGATGTTAG
ACATTTTCTTTGCATGTTACGGCTTACGGGTTTGGACTATTGATATCCAT
CGTCGCTCCTGGGCCACAAAAAATCGCCATCAGCGAGTCGACTGATTTTG
TTTTGGAATTTTTTTTTTGGAGACTCTTTTAGACTGGGTTTTTTGCTTTC
TTACCCATGGGACGAACGTGCACATGCATGCTAGGCAATGCAAGGCCATG
CAGCGTCACTTTTTTTTTCTCCCTCTCTCATGTTCACATACACATTTCAC
ATACCAATGATGTCTCTTCCACTGGGCTGGTTAGATGGATTGGATAGGTT
CGGGTTACTTTAGACTTTTGCTTTGATTCTGATTTTGATTTTGGTTACAT
GGAATCTACTACGACCCTGCAATGTTGCAGCCGGTTTCTTTCCCACCCAC
CC back to topCoding sequence (CDS) from alignment at ch7:3202376..3204777- >KJC3_010387-T1 ID=KJC3_010387-T1|Name=KJC3_010387-T1|organism=Aspergillus niger KJC3|type=CDS|length=1431bp|location=Sequence derived from alignment at ch7:3202376..3204777- (Aspergillus niger KJC3)
ATGCCTCGCTTCGACGACGCCGACTTTGCCGTGGACGCTGCCCCTGCCCC
GGGTGCCCGCTCCCCCCGGGATGCTCGTGGTAGCGCTGCTGGCTCTCTGC
CCATCCCTAACGATGCTGGCAACACTGTTGAGATCCCCGCTACTCGCAGC
TCCATCAGCGATGCTGCTCAGTACATGCACAACCTGAGCTTTGCTCCCTC
CTCCCGGGACCGTCGTGGCTCCCGCAACTCCTTCGGCACTTCCCTGCCCA
TCCCCAGATCTCCCCGTGTCTCCCGTCTTTCCTCGGTGGTCACTGCGGAT
GTATCCCGCGACATCCTGGCCTCTCAGGTCCAGGACATGTCCAAGGAGAA
GGTCGCTGCTGCCAAGAACATGGCCTTCGCTTTCGATATCGATGGTGTCT
TGGCCCACGGTAACGAGGCCATTCCCGAGGCCAAGGAGGCCCTCGCGATG
CTCAACGGTGACAACGAGCTGGGCATCAAGATCCCCTACATTCTCCTGAC
CAACGGTGGTGGTAAGACTGAGGATGAGCGCTGCGCCCAGCTCACCGAGG
TCCTTGGCTGCCCCATCTCCACCGACCAGTTCATCCAGTCTCACACCCCA
ATGCAGGCGTTGGCCGAGTACTACGAAACCGTCCTGGTCTGCGGTGGTGA
GGGTCAGAAGATCCGCAAGGTCGCTGAGAACTATGGCTTCAAGAACGTCA
TCCACCCCAAGGATATCCTCGCCTGGGACCAAACCATCTCCCCCTGGGGC
TGCTTCCACGAGGAGGACCGTCTCCAGGCCAAGCCCCGCGACTTCTCTAA
GATCAAGTTCGATGCTATCCTGGTGTTCGCCGACTCCCGCGACTACGCCA
CTGACATGCAGCTCATCATGGATCTCCTCCTGGCTGAGGACGGAAAGCTG
CTGACCCGCGCCAAGGACCCCGTTGCCTCCCGCATCCCGGTCTACTTCTC
CCAGGGTGACCTGGTCTTCCCTACCGACCACAAGGGTCCCCCCCGTCTGA
CCCAGGGTCTCTTCCGTATCTCCATTGAGGCTCAGTACAAGGCCCTCACC
GGTGTCGACCTGGAGCGTGTCGTCTACGGCAAGCCCGAGCGCGCCACTTA
CACCTACGCCGATGAGGTCATGAAGGCCTGGATGGAGCAGATCCACAACG
AGAACCGCCTGCCCGAGAACATCTACATGGTCGGTGACAACCCGGCCTCC
GACATCTGCGGTGGTAACATGCACGGCTGGAACACCTGTCTGGTGCGCAC
CGGTGTCTTCCAGGGCAAGGACAACGACGACAACAACCCGGCCAACTTCG
GTGTCTTCCCCAACGTCCTGGAGGCTGTCAAGGCCGCCGTCCGCAAGGAG
CTCGGCCAGGACTTCAAGTTCAAGTGGAACCCCAAGGTCAACCCCGTCCT
CCACGGCGACGGTGCCTCTGCTGTCGAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010387-T1.utr3p1 | KJC3_010387-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010387-T1.utr5p1 | KJC3_010387-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.9 |
| DBxref | InterPro:IPR036412 |
| DBxref | InterPro:IPR006353 |
| DBxref | InterPro:IPR023214 |
| DBxref | InterPro:IPR006357 |
| DBxref | PFAM:PF13242 |
| DBxref | PFAM:PF13344 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3202376..3204777 - |
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