|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3205837..3207289+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010388-T1 ID=KJC3_010388-T1|Name=KJC3_010388-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1453bp|location=Sequence derived from alignment at ch7:3205837..3207289+ (Aspergillus niger KJC3)
GCATAATATAATTAGTAGCAGCAACAGCATCATACCCCTCATCAACACAA
CCCCCTCCACCCCACTTGCTGTTCTTGCCTGTAAAGTTGCCTTCTCAACG
AGAGCCCCTCCTCGCCGATACCACCAAGTGACTTCTTCCCCTCCCACCCG
CTATTTGTACTCATCCCTCGGCTTCCTTAGCTATTCTTCTTCCTCCTCAG
TTATACCCAATCCCTTCTATACTCCATCACATCGATACCCCTATACAACC
ATGTCTTCCGGACAGACCTTCACTCTCAGCAACGGCGTCAAGATCCCCGG
CGTCGGCTTCGGTACCTTCGCCAACGAGGGTGCCACGGGTGAGACCTACA
AGGCCGTCACCTGCGCTCTTAACACCGGATACCGTCACCTCGACTGTGCC
TGGTACTACCTGAACGAGGGTGAGGTTGGTGACGCCGTCAAGGACTTCCT
CGCTGCCAACCCCTCCGTCAAGCGTGAGGACATCTTCATCTGCACCAAGG
TCTGGAACCACCTCCACCGCCCCGAGGATGTGCAGTGGTCCATCGAGAGC
TCCCTCAAGAAGCTCAAGGTCGACTACATCGACCTCTTCCTTGTTCACTG
GCCCATTGCTGCCGAGAAGGAGACTCAGGAGAAGCCCAAGATTGGCCCTG
ATGGAAAGGTAAATCTTCACTCAATTCTGTCGGGTACTACCGGTCGGAGC
ACAGCTGACTCGATACTCCGATAGTACGTGATCCTCAAGGATCTCACTGA
GAACCCGGAGCCCACCTGGAGGGCAATGGAGAAGATCTACAAGGAGAAAA
AGGCCAAGGCGATTGGTGTCTCCAACTGGACCATCGAGGGTCTGGAGAAG
CTTCTCAAGTACGCTGAGGTCAAGCCTCACGTTAACCAGATCGAGATCCA
CCCCTTCCTGCCCAACCAGGAGCTGGTCGACTACTGCTTCAAGCACGACA
TCCTGCCCGAGGCCTACTCTCCCCTGGGCTCCCAGAACCAGGTGCCCACG
ACGGGTGAGAAGGTCAGCGAGAACCAGACGCTGAACGAGATCGCCAAGAA
GGGCGGCTACACCCTGGCGCAGGTGCTCATCGCCTGGGGTCTGCGTCGTG
GCTACGTGGTGCTCCCCAAGAGCTCCAACCCGGCTCGTATCGAGTCCAAC
TTCAAGAGCATCCAGCTGACGGATGAGGAGTACGAGGCCGTCAACAAGGT
GGCTGAGGGTCGTCACTTCCGCTTCGTCAACATGAAGGACACCTTTGGCT
ACGACGTGTGGCCCGAGGAGACCGCCAAGAACCTTTCTGCTTAGATGATG
ATAGAGAGCGATTTTTGATTTATGCAGGCCATAAACCAGTAAAATTGGAC
AAAATGAGCTTATGAGTGGATGGACCTATTGAGATGAAATGTGTATCTAG
CAATCCAAAGCAATAGCCAGATTACACCACAATACAATACGTATAGAAAG
CAA back to topCoding sequence (CDS) from alignment at ch7:3205837..3207289+ >KJC3_010388-T1 ID=KJC3_010388-T1|Name=KJC3_010388-T1|organism=Aspergillus niger KJC3|type=CDS|length=1956bp|location=Sequence derived from alignment at ch7:3205837..3207289+ (Aspergillus niger KJC3)
ATGTCTTCCGGACAGACCTTCACTCTCAGCAACGGCGTCAAGATCCCCGG
CGTCGGCTTCGGTACCTTCGCCAACGAGGGTGCCACGGGTGAGACCTACA
AGGCCGTCACCTGCGCTCTTAACACCGGATACCGTCACCTCGACTGTGCC
TGGTACTACCTGAACGAGGGTGAGGTTGGTGACGCCGTCAAGGACTTCCT
CGCTGCCAACCCCTCCGTCAAGCGTGAGGACATCTTCATCTGCACCAAGG
TCTGGAACCACCTCCACCGCCCCGAGGATGTGCAGTGGTCCATCGAGAGC
TCCCTCAAGAAGCTCAAGGTCGACTACATCGACCTCTTCCTTGTTCACTG
GCCCATTGCTGCCGAGAAGGAGACTCAGGAGAAGCCCAAGATTGGCCCTG
ATGGAAAGTACGTGATCCTCAAGGATCTCACTGAGAACCCGGAGCCCACC
TGGAGGGCAATGGAGAAGATCTACAAGGAGAAAAAGGCCAAGGCGATTGG
TGTCTCCAACTGGACCATCGAGGGTCTGGAGAAGCTTCTCAAGTACGCTG
AGGTCAAGCCTCACGTTAACCAGATCGAGATCCACCCCTTCCTGCCCAAC
CAGGAGCTGGTCGACTACTGCTTCAAGCACGACATCCTGCCCGAGGCCTA
CTCTCCCCTGGGCTCCCAGAACCAGGTGCCCACGACGGGTGAGAAGGTCA
GCGAGAACCAGACGCTGAACGAGATCGCCAAGAAGGGCGGCTACACCCTG
GCGCAGGTGCTCATCGCCTGGGGTCTGCGTCGTGGCTACGTGGTGCTCCC
CAAGAGCTCCAACCCGGCTCGTATCGAGTCCAACTTCAAGAGCATCCAGC
TGACGGATGAGGAGTACGAGGCCGTCAACAAGGTGGCTGAGGGTCGTCAC
TTCCGCTTCGTCAACATGAAGGACACCTTTGGCTACGACGTGTGGCCCGA
GGAGACCGCCAAGAACCTTTCTGCTTAGATGTCTTCCGGACAGACCTTCA
CTCTCAGCAACGGCGTCAAGATCCCCGGCGTCGGCTTCGGTACCTTCGCC
AACGAGGGTGCCACGGGTGAGACCTACAAGGCCGTCACCTGCGCTCTTAA
CACCGGATACCGTCACCTCGACTGTGCCTGGTACTACCTGAACGAGGGTG
AGGTTGGTGACGCCGTCAAGGACTTCCTCGCTGCCAACCCCTCCGTCAAG
CGTGAGGACATCTTCATCTGCACCAAGGTCTGGAACCACCTCCACCGCCC
CGAGGATGTGCAGTGGTCCATCGAGAGCTCCCTCAAGAAGCTCAAGGTCG
ACTACATCGACCTCTTCCTTGTTCACTGGCCCATTGCTGCCGAGAAGGAG
ACTCAGGAGAAGCCCAAGATTGGCCCTGATGGAAAGTACGTGATCCTCAA
GGATCTCACTGAGAACCCGGAGCCCACCTGGAGGGCAATGGAGAAGATCT
ACAAGGAGAAAAAGGCCAAGGCGATTGGTGTCTCCAACTGGACCATCGAG
GGTCTGGAGAAGCTTCTCAAGTACGCTGAGGTCAAGCCTCACGTTAACCA
GATCGAGATCCACCCCTTCCTGCCCAACCAGGAGCTGGTCGACTACTGCT
TCAAGCACGACATCCTGCCCGAGGCCTACTCTCCCCTGGGCTCCCAGAAC
CAGGTGCCCACGACGGGTGAGAAGGTCAGCGAGAACCAGACGCTGAACGA
GATCGCCAAGAAGGGCGGCTACACCCTGGCGCAGGTGCTCATCGCCTGGG
GTCTGCGTCGTGGCTACGTGGTGCTCCCCAAGAGCTCCAACCCGGCTCGT
ATCGAGTCCAACTTCAAGAGCATCCAGCTGACGGATGAGGAGTACGAGGC
CGTCAACAAGGTGGCTGAGGGTCGTCACTTCCGCTTCGTCAACATGAAGG
ACACCTTTGGCTACGACGTGTGGCCCGAGGAGACCGCCAAGAACCTTTCT
GCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010388-T1.utr5p1 | KJC3_010388-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010388-T1.utr3p1 | KJC3_010388-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.9 |
| Note | SMCOG1039:aldo/keto reductase family oxidoreductase |
| DBxref | InterPro:IPR018170 |
| DBxref | InterPro:IPR023210 |
| DBxref | InterPro:IPR036812 |
| DBxref | InterPro:IPR020471 |
| DBxref | PFAM:PF00248 |
| Product | Glycerol 2-dehydrogenase (NADP( )) |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3205837..3207289 + |
|
