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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3224706..3226207+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010395-T1 ID=KJC3_010395-T1|Name=KJC3_010395-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1502bp|location=Sequence derived from alignment at ch7:3224706..3226207+ (Aspergillus niger KJC3)
CTTGTTCGCCCTCAACACCATCCTATCGGGACGTTTTCTGAAGCTTGCCG
GATTGTTGACTTGCACTTATTCTACCTTCTAGTCTGCTAGCTTCATCATT
ATCAATCTTACACCATGGCGCAATCACCCGTGGCCGTCGTCTGCGTCGGC
ATGGCAGGTATGCCGATACTGCTCCCATCTCATCTTCATCTTCTCTGACA
AGCGCTCCTACCTAGGCTCCGGCAAGACGACCTTCATGCAGAGAATCAAC
TCGCATCTCCACTCGAAGAAGAAGTTTCCCTACGTGCTGAACCTGGACCC
CGCCGTCTACTCCGTTCCGTTCGAGAGCAACATCGACATCCGCGACTCCA
TCAACTACAGAGAAGTCATGAAGCAGTACAACCTCGGGCCTAACGGCGGT
ATTCTCACATCCCTCAACTTGTTCGCTACGAAAGTCGACCAGATAATCGC
CCTACTGGAGAAGCGTACTGCACCGAACCCGAGCAACCCCTCCGCCAAGC
CGATCGAGCACATTCTTGTCGACACTCCCGGACAGATTGAGGTGTTCGTA
TGGAGCGCATCTGGAAGCATTTTGCTTGAGACACTGGCCTCTTCATTCCC
TACCGTCATCGCATATGTCATTGATACCCCCCGCACCAGCTCCACGAGCA
CCTTCATGAGTAACATGCTCTACGCCTGCAGTATCCTGTACAAGACCAAG
CTGCCGATGATCCTTGTCTTCAACAAGACCGACGTGCAGGATGCCGAATT
TGCCAAGGAATGGATGTCCGATTTCGATGCGTTTCAGCAGGCGCTCCGGG
AAGAAGAGGAGTCGGGTGCGTTTGGCGCCGAGGGCGGAGCCGGTGGCTTT
GGTGCTGGAAGTGGATACATGGGATCGCTACTGAACAGCATGAGCTTGAT
GTTGGAGGAGTTTTATCGCCATCTGAACGTCGTGGGTGTGAGCTCCATGA
CGGGTGATGGTATTGATGAGTTCTTCGCTGCTGTGGAGGAGAAGCGCCAG
GAATTTGAGCGTGATTACAAGCCTGAGCTGGAGCGCAAGAAGAAGGAGCG
CGAGGAGACCAAGGCTGCACAGCGGGAGCTGGAACTGGGCAAGTTGATGA
AGGATATGAGCGTCTCCAGTTCTAGTCGTCAACGCAAGGACGAAGCCGAG
ACCGTCAGTGAGGCGGAAGAAGAGGCAGAAGATGCGGCTGGCCAGGGAGG
TTTCGACGACGATGATGATTCCGATGAAGATGGATATGGCGGTGCTCCCC
CAGCGGGTAACGATGAAGGGCTGTCACAGCGGTACAAGGATGCCCTGGCA
GATCAGGCTGGTCCTTCGGATGCGGATCACAGTTTCGCCAGATACTTGCG
CAAGAGCAACATTAACTAGGATTTTGGGGATGATATCACGGGAGATGTGC
ATTCTGCTACTTCATATATTGGTGTACGAAGGCGTTGATATTGGCTCATT
CATCATGAATAAATGATTAGAATCTAATTTAAAAGCATACTGTTCGACTC
GG back to topCoding sequence (CDS) from alignment at ch7:3224706..3226207+ >KJC3_010395-T1 ID=KJC3_010395-T1|Name=KJC3_010395-T1|organism=Aspergillus niger KJC3|type=CDS|length=1134bp|location=Sequence derived from alignment at ch7:3224706..3226207+ (Aspergillus niger KJC3)
ATGCAGAGAATCAACTCGCATCTCCACTCGAAGAAGAAGTTTCCCTACGT
GCTGAACCTGGACCCCGCCGTCTACTCCGTTCCGTTCGAGAGCAACATCG
ACATCCGCGACTCCATCAACTACAGAGAAGTCATGAAGCAGTACAACCTC
GGGCCTAACGGCGGTATTCTCACATCCCTCAACTTGTTCGCTACGAAAGT
CGACCAGATAATCGCCCTACTGGAGAAGCGTACTGCACCGAACCCGAGCA
ACCCCTCCGCCAAGCCGATCGAGCACATTCTTGTCGACACTCCCGGACAG
ATTGAGGTGTTCGTATGGAGCGCATCTGGAAGCATTTTGCTTGAGACACT
GGCCTCTTCATTCCCTACCGTCATCGCATATGTCATTGATACCCCCCGCA
CCAGCTCCACGAGCACCTTCATGAGTAACATGCTCTACGCCTGCAGTATC
CTGTACAAGACCAAGCTGCCGATGATCCTTGTCTTCAACAAGACCGACGT
GCAGGATGCCGAATTTGCCAAGGAATGGATGTCCGATTTCGATGCGTTTC
AGCAGGCGCTCCGGGAAGAAGAGGAGTCGGGTGCGTTTGGCGCCGAGGGC
GGAGCCGGTGGCTTTGGTGCTGGAAGTGGATACATGGGATCGCTACTGAA
CAGCATGAGCTTGATGTTGGAGGAGTTTTATCGCCATCTGAACGTCGTGG
GTGTGAGCTCCATGACGGGTGATGGTATTGATGAGTTCTTCGCTGCTGTG
GAGGAGAAGCGCCAGGAATTTGAGCGTGATTACAAGCCTGAGCTGGAGCG
CAAGAAGAAGGAGCGCGAGGAGACCAAGGCTGCACAGCGGGAGCTGGAAC
TGGGCAAGTTGATGAAGGATATGAGCGTCTCCAGTTCTAGTCGTCAACGC
AAGGACGAAGCCGAGACCGTCAGTGAGGCGGAAGAAGAGGCAGAAGATGC
GGCTGGCCAGGGAGGTTTCGACGACGATGATGATTCCGATGAAGATGGAT
ATGGCGGTGCTCCCCCAGCGGGTAACGATGAAGGGCTGTCACAGCGGTAC
AAGGATGCCCTGGCAGATCAGGCTGGTCCTTCGGATGCGGATCACAGTTT
CGCCAGATACTTGCGCAAGAGCAACATTAACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010395-T1.utr5p1 | KJC3_010395-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010395-T1.utr3p1 | KJC3_010395-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263QH4 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR004130 |
| DBxref | PFAM:PF03029 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3224706..3226207 + |
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