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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3249590..3251468+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010406-T1 ID=KJC3_010406-T1|Name=KJC3_010406-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1879bp|location=Sequence derived from alignment at ch7:3249590..3251468+ (Aspergillus niger KJC3)
AGTGCTTCCTGCTCCCTGTTACGTACCAAAAGTTTTATTCTTCTGTATCT
TAATTATATACCCCAGATTCTATTATACCCTTTTCCTTCATCCCCCTACA
CTATGGCGGAGTCCTCCAATTCCGCCGCGGCCTCAGGCCCGGCCCAGTCC
GCAGCGTCTACCAGCGCTCCCAAGCCCTCCAACCCAGCCTTCAGAATGCT
TGGTATAGATCCCCAATGCCCTCAGCCAGTATCCTTATACCTAATAGCCT
TCAAGGAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGATGA
TCTTCTTCACCATCACCGGCTCGTTCGCCGCAGCTGTCATTTACGACCGG
AGAGAGAAGCGCCGCGCGCAACAAAAATGGAGTGATCTCGTCGCTCACAT
CTCCAAGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGTCT
TCCTGTCCGCGCCACCGGGTGACGGTATCCGCGTGGCTCGCGACCACTTC
AAAGAATACGTTAAGCCGATCCTCGTGGCAGCGGCACTAGACTACCAAAT
CATCGAAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCA
TTCGCAAGTGGAGACGTAAGGCAGGCGAACCGAGTACGGTGGTGGAGGAC
CCCACGGTCGAAGACGTCGTTTTCGCCGCAAGGACGCAGATGGGCGTTAT
AGAGGAGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGTCACACATGGA
AGGAGTACATTCGCGGTCTGCACGAAGGTTGGCTGGGTCCTCTTGATCCT
CCCCCTCCGCCTCCTGCCACGGAGGATCCCGCTCCTGTGGAATCCAGCAC
ACCCGCCGCAGAGGCCGCCTCTGAGACCAAGGAGGGCGATGCCAATGCCC
CCGAGCAGGAAAAGAAGGAAGAGAAGCCTGCTAAACCCGTGGGACCGACA
CCAGCTTACATCTCCACATCCGACTACTCATCGCAACCCCTCCCGCGTAC
TATCCCCCAGACTCTTTCAGGCTCCGTCCCCATCGCCTTCCCCCACATCC
TGGGTTTCCTCAACATCCCCATCAGACTCTACCGCTACCTTAACCAGCGC
CACATGGCCGAGAGCGTAGGCCGCGACGTCGCAGCCATTGTCCTGGCCTC
ATACAGCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCA
TCTCCGACGATACCCTTGGCAGCACCACCTATGAACAACAGACCGTCCTC
GAGGAGGAAGAAAAGGAATGGCACAAGTCCGTCCACCGCAAGGACGAAGC
CAACCCTGACAAGGAACGCGAATGGCTCGACGACATCGTCATCGACCCGC
ACCTCGCCTCCCGCATGCATCGCTACAGCGTCTCGCCTGAGGAAGAGGCC
CGCGCTCAGCGCATCCTCGAAGGCCAGGAATACATCCTGGGTCAGGAACG
CCCTGTTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGATACG
GAGAGGATGAGGAGACGTTGAGGAGGAAGCCTATCTTGGGCAACCTTGAT
GAGGATTAAGTCATTTGTTGAGATTGATGTTTGGGGAGGATATTGTCACC
ATAAATAGAAAGGGTTTCCTGGATCTCTATCTGTGTTTGGGTTAGAGGTA
TATAGACATATTCTTATTTTTTGTCGTTGGTATTTTGGGGCCGATACGAT
CATTGCATGGGAAATGTGTTTTATCGGGATGGATGGGTATTTGTACTAAC
AACTATTGACATCTCCTTATCAACTGTATATTAGTCGAATCTAAGATGAT
CTTCACTGGTCAGGTATTTCATGTCTAGTGTAGATGTATCACTCGAGGAT
GCAACCTCCCTACAAGAGGCTCATCAGGC back to topCoding sequence (CDS) from alignment at ch7:3249590..3251468+ >KJC3_010406-T1 ID=KJC3_010406-T1|Name=KJC3_010406-T1|organism=Aspergillus niger KJC3|type=CDS|length=1344bp|location=Sequence derived from alignment at ch7:3249590..3251468+ (Aspergillus niger KJC3)
ATGCCCTCAGCCAGTATCCTTATACCTAATAGCCTTCAAGGAATGCCGAA
CCTTCGCATGAAACTTCCCTCTCGGAATTGGATGATCTTCTTCACCATCA
CCGGCTCGTTCGCCGCAGCTGTCATTTACGACCGGAGAGAGAAGCGCCGC
GCGCAACAAAAATGGAGTGATCTCGTCGCTCACATCTCCAAGGAGCATCT
TCCCATCGAGCAAACCCGACGCAAAATCAACGTCTTCCTGTCCGCGCCAC
CGGGTGACGGTATCCGCGTGGCTCGCGACCACTTCAAAGAATACGTTAAG
CCGATCCTCGTGGCAGCGGCACTAGACTACCAAATCATCGAAGGCAGAAG
GGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCATTCGCAAGTGGAGAC
GTAAGGCAGGCGAACCGAGTACGGTGGTGGAGGACCCCACGGTCGAAGAC
GTCGTTTTCGCCGCAAGGACGCAGATGGGCGTTATAGAGGAGCCCGGACC
GAAGGGTGATTTGGTCATCGGTCGTCACACATGGAAGGAGTACATTCGCG
GTCTGCACGAAGGTTGGCTGGGTCCTCTTGATCCTCCCCCTCCGCCTCCT
GCCACGGAGGATCCCGCTCCTGTGGAATCCAGCACACCCGCCGCAGAGGC
CGCCTCTGAGACCAAGGAGGGCGATGCCAATGCCCCCGAGCAGGAAAAGA
AGGAAGAGAAGCCTGCTAAACCCGTGGGACCGACACCAGCTTACATCTCC
ACATCCGACTACTCATCGCAACCCCTCCCGCGTACTATCCCCCAGACTCT
TTCAGGCTCCGTCCCCATCGCCTTCCCCCACATCCTGGGTTTCCTCAACA
TCCCCATCAGACTCTACCGCTACCTTAACCAGCGCCACATGGCCGAGAGC
GTAGGCCGCGACGTCGCAGCCATTGTCCTGGCCTCATACAGCCGCCCTTA
CAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCATCTCCGACGATACCC
TTGGCAGCACCACCTATGAACAACAGACCGTCCTCGAGGAGGAAGAAAAG
GAATGGCACAAGTCCGTCCACCGCAAGGACGAAGCCAACCCTGACAAGGA
ACGCGAATGGCTCGACGACATCGTCATCGACCCGCACCTCGCCTCCCGCA
TGCATCGCTACAGCGTCTCGCCTGAGGAAGAGGCCCGCGCTCAGCGCATC
CTCGAAGGCCAGGAATACATCCTGGGTCAGGAACGCCCTGTTCCTGTGTC
GTTCTGGAAGCGCATGTGGGTGAAGTATGGATACGGAGAGGATGAGGAGA
CGTTGAGGAGGAAGCCTATCTTGGGCAACCTTGATGAGGATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010406-T1.utr5p1 | KJC3_010406-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010406-T1.utr3p1 | KJC3_010406-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263XVS |
| DBxref | InterPro:IPR021056 |
| DBxref | PFAM:PF11711 |
| Product | mitochondrial import inner membrane translocase subunit tim54 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3249590..3251468 + |
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