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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3258946..3261316+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010411-T1 ID=KJC3_010411-T1|Name=KJC3_010411-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2371bp|location=Sequence derived from alignment at ch7:3258946..3261316+ (Aspergillus niger KJC3)
CAAAGCATTTGTCTTTCTTTCGATCAGTGTCACTGTAGCATTTCTTCTAC
CTGCTCTCTTATTCCATGCACACAGAGGTCTTGCACATTGCTTTGAACTT
GACTTCGAAGCCTTCACATTGCTAAATTACCACGGTCCGAGTTGCAGCGC
AGACTTCTGAGCCCGCTGCGGAGTGGCGCTGCAATACCTGCTCATTCACC
TAGGAGTCTTCAGCTGCCGCTACAATGAGTGCAATTCTATCTGCAGACGA
TCTGAACGACTTCATTTCCCCCGGAGTTGCGTGTATCAAGCCTGTGGAAA
CTCTCCCTGCGAAAGATCCCTCGAAAACAGACGTAAGTGCTTGACCTCTA
CTCTGCTTGTACCCCACTTCATCCAATGAATGAGCACTGATTTATAATCT
ATCAGAATCCCTATGAGGTGACCACAGAAGACAAAGTGCAACCAGAAAAT
CTTCCACCGGCTCAAATCTCGCTAACTGACTGCCTCGCATGCTCTGGATG
TGTCACTTCGGCCGAGGCCGTGCTCATCTCGTTGCAATCGCATGCAGAAG
TCCTCAATACTTTGGACGCGCATCCCGAGTTGCCACTGAACCGTGAAGAT
GGGACAATTACACAGGAGCTGGGCACGGCGAGTGACGAAGGCCGAGTGTT
CGTCGCAAGTGTCAGCCCTCAAGTGAGGGCAAGTCTAGCAGCAACCTATG
GGATCACGGAGAAGGAAGCAACATACATGATCCACCAGTTTCTCAGCGGT
CCTCACGGTTTAAGGGCTGGAGGCAAGAATGGCAGCGGCTTCACATGGGT
AGCTGACACCAATGTCCTTCGTGAAGCTGTGTTGGTTCTTACAGCGGACG
AAGTTGGCGAGACATTGACGACCAGTCCAGATTCTCCTAGTACTAACGGC
GCAACCAATACTCTCCCCAAGCGACCGATCCTCTCGTCCGCATGCCCGGG
TTGGATATGCTATGCTGAGAAGACACATCCATTTGTTCTGCCACATCTGT
CCCGCCTCAAGTCACCGCAAGCCCTGGCTGGCACGTTCTTCAAGACTGTC
CTCAGCAAATCACTTGGGATACCGGCCTCTCGCATTTGGCATTTGGCCGT
CATGCCTTGCTTCGACAAAAAGCTTGAAGCCAGTCGCGAGGAGCTCACTG
ATGCTTCATGGCTGTATGCGAAGGACGAAGACCATGCAGCCGTCCGTGAC
GTTGATTGCGTGATCACTACGCGCGAAATGCTTAGTCTGGCTTCTTCCAG
AGGCATTTCCCTTCCTAACCTACCGTTGAAATCACTTCCTCAGTCTTATA
TCCCGCCATTTCCCGATATGACTCTAAACGACTTTCTATTTTCGAAGTCT
TCCCCGGGACAATCAGCTGCCGCAGGTACATCCGGAGGCTACCTTCACCA
CGTGCTTCAGACTTTCCAAGCGCGTAATCCAGGCAGTGAGATCGTGACTC
AGCGTGGAAGAAATGCGGATGTGGTCGAGTACACGCTCATGTCGTCTGAG
CACACGCCTATTCTGAAAGCCGCTCGCTATTACGGTTTCCGCAATATTCA
GAATCTCGTCCGCAAGCTGAAACCAGCACGGGCTTCTCGACTTCCAGGCG
GTAATCGACGACTGCCAGTCGGACGGGGCGCCGCGTCCGGTAGCTCTGGC
ACAGACTACGCTTATGTAGAAGTCATGGCATGCCCTGGAGGCTGTACTAA
TGGAGGAGGCCAGATACGCATTGAAGATGCTCGCGAAGCCAGCTCGAGCG
TGCAGTCCTCAACGTCGGCTGAAGTGCCCGACTCATCGTCGAAGCCGACA
CCACATGAGCAACGCGCTTGGCTTGCCCGTGTAGACGAGGCATATTATTC
TGCGGAGTCGGACACCGAGTCAGAAGCCGGAAGCCAGTCGCAGCCGCTAT
CTATTCTTGACAAAGAAGACAAAATTCACAATGCCATGCGTTATTGGTCT
GACTCCATGGGCATCCCGCTCTCGAAGCTTGCCTATACCACATATCGCGA
GGTTGAGAGTGATGTCGGCAAATCCCAGCCTGCTGCGACCGATACAACTC
GCATTGCTGAGCTTGCTGGGAAGATTGGTGGCGGTTGGTAGATTCGTTTG
TTTGCTTTCATTATTCTTATGACATATACCCTGTGATGTTTGGATGACAT
GAGCCATGCGTGCATTTTCTTCATCGGGACAACAGTCTGCGCATTTGGAC
TGCACATTATATAGAGAGATACCATGTTGAATCTTGGTGGCAATACAATA
AGTCGTTGGAGATGTACGTTGTGTCTTATAGATGACTGCGTCCCAATCAC
TGAGCAATCAGTCGTACCCCATGCCAATGACAAATGCACTGTATATAATC
TCCATCCTGATAATAATCGAC back to topCoding sequence (CDS) from alignment at ch7:3258946..3261316+ >KJC3_010411-T1 ID=KJC3_010411-T1|Name=KJC3_010411-T1|organism=Aspergillus niger KJC3|type=CDS|length=3588bp|location=Sequence derived from alignment at ch7:3258946..3261316+ (Aspergillus niger KJC3)
ATGAGTGCAATTCTATCTGCAGACGATCTGAACGACTTCATTTCCCCCGG
AGTTGCGTGTATCAAGCCTGTGGAAACTCTCCCTGCGAAAGATCCCTCGA
AAACAGACAATCCCTATGAGGTGACCACAGAAGACAAAGTGCAACCAGAA
AATCTTCCACCGGCTCAAATCTCGCTAACTGACTGCCTCGCATGCTCTGG
ATGTGTCACTTCGGCCGAGGCCGTGCTCATCTCGTTGCAATCGCATGCAG
AAGTCCTCAATACTTTGGACGCGCATCCCGAGTTGCCACTGAACCGTGAA
GATGGGACAATTACACAGGAGCTGGGCACGGCGAGTGACGAAGGCCGAGT
GTTCGTCGCAAGTGTCAGCCCTCAAGTGAGGGCAAGTCTAGCAGCAACCT
ATGGGATCACGGAGAAGGAAGCAACATACATGATCCACCAGTTTCTCAGC
GGTCCTCACGGTTTAAGGGCTGGAGGCAAGAATGGCAGCGGCTTCACATG
GGTAGCTGACACCAATGTCCTTCGTGAAGCTGTGTTGGTTCTTACAGCGG
ACGAAGTTGGCGAGACATTGACGACCAGTCCAGATTCTCCTAGTACTAAC
GGCGCAACCAATACTCTCCCCAAGCGACCGATCCTCTCGTCCGCATGCCC
GGGTTGGATATGCTATGCTGAGAAGACACATCCATTTGTTCTGCCACATC
TGTCCCGCCTCAAGTCACCGCAAGCCCTGGCTGGCACGTTCTTCAAGACT
GTCCTCAGCAAATCACTTGGGATACCGGCCTCTCGCATTTGGCATTTGGC
CGTCATGCCTTGCTTCGACAAAAAGCTTGAAGCCAGTCGCGAGGAGCTCA
CTGATGCTTCATGGCTGTATGCGAAGGACGAAGACCATGCAGCCGTCCGT
GACGTTGATTGCGTGATCACTACGCGCGAAATGCTTAGTCTGGCTTCTTC
CAGAGGCATTTCCCTTCCTAACCTACCGTTGAAATCACTTCCTCAGTCTT
ATATCCCGCCATTTCCCGATATGACTCTAAACGACTTTCTATTTTCGAAG
TCTTCCCCGGGACAATCAGCTGCCGCAGGTACATCCGGAGGCTACCTTCA
CCACGTGCTTCAGACTTTCCAAGCGCGTAATCCAGGCAGTGAGATCGTGA
CTCAGCGTGGAAGAAATGCGGATGTGGTCGAGTACACGCTCATGTCGTCT
GAGCACACGCCTATTCTGAAAGCCGCTCGCTATTACGGTTTCCGCAATAT
TCAGAATCTCGTCCGCAAGCTGAAACCAGCACGGGCTTCTCGACTTCCAG
GCGGTAATCGACGACTGCCAGTCGGACGGGGCGCCGCGTCCGGTAGCTCT
GGCACAGACTACGCTTATGTAGAAGTCATGGCATGCCCTGGAGGCTGTAC
TAATGGAGGAGGCCAGATACGCATTGAAGATGCTCGCGAAGCCAGCTCGA
GCGTGCAGTCCTCAACGTCGGCTGAAGTGCCCGACTCATCGTCGAAGCCG
ACACCACATGAGCAACGCGCTTGGCTTGCCCGTGTAGACGAGGCATATTA
TTCTGCGGAGTCGGACACCGAGTCAGAAGCCGGAAGCCAGTCGCAGCCGC
TATCTATTCTTGACAAAGAAGACAAAATTCACAATGCCATGCGTTATTGG
TCTGACTCCATGGGCATCCCGCTCTCGAAGCTTGCCTATACCACATATCG
CGAGGTTGAGAGTGATGTCGGCAAATCCCAGCCTGCTGCGACCGATACAA
CTCGCATTGCTGAGCTTGCTGGGAAGATTGGTGGCGGTTGGTAGATGAGT
GCAATTCTATCTGCAGACGATCTGAACGACTTCATTTCCCCCGGAGTTGC
GTGTATCAAGCCTGTGGAAACTCTCCCTGCGAAAGATCCCTCGAAAACAG
ACAATCCCTATGAGGTGACCACAGAAGACAAAGTGCAACCAGAAAATCTT
CCACCGGCTCAAATCTCGCTAACTGACTGCCTCGCATGCTCTGGATGTGT
CACTTCGGCCGAGGCCGTGCTCATCTCGTTGCAATCGCATGCAGAAGTCC
TCAATACTTTGGACGCGCATCCCGAGTTGCCACTGAACCGTGAAGATGGG
ACAATTACACAGGAGCTGGGCACGGCGAGTGACGAAGGCCGAGTGTTCGT
CGCAAGTGTCAGCCCTCAAGTGAGGGCAAGTCTAGCAGCAACCTATGGGA
TCACGGAGAAGGAAGCAACATACATGATCCACCAGTTTCTCAGCGGTCCT
CACGGTTTAAGGGCTGGAGGCAAGAATGGCAGCGGCTTCACATGGGTAGC
TGACACCAATGTCCTTCGTGAAGCTGTGTTGGTTCTTACAGCGGACGAAG
TTGGCGAGACATTGACGACCAGTCCAGATTCTCCTAGTACTAACGGCGCA
ACCAATACTCTCCCCAAGCGACCGATCCTCTCGTCCGCATGCCCGGGTTG
GATATGCTATGCTGAGAAGACACATCCATTTGTTCTGCCACATCTGTCCC
GCCTCAAGTCACCGCAAGCCCTGGCTGGCACGTTCTTCAAGACTGTCCTC
AGCAAATCACTTGGGATACCGGCCTCTCGCATTTGGCATTTGGCCGTCAT
GCCTTGCTTCGACAAAAAGCTTGAAGCCAGTCGCGAGGAGCTCACTGATG
CTTCATGGCTGTATGCGAAGGACGAAGACCATGCAGCCGTCCGTGACGTT
GATTGCGTGATCACTACGCGCGAAATGCTTAGTCTGGCTTCTTCCAGAGG
CATTTCCCTTCCTAACCTACCGTTGAAATCACTTCCTCAGTCTTATATCC
CGCCATTTCCCGATATGACTCTAAACGACTTTCTATTTTCGAAGTCTTCC
CCGGGACAATCAGCTGCCGCAGGTACATCCGGAGGCTACCTTCACCACGT
GCTTCAGACTTTCCAAGCGCGTAATCCAGGCAGTGAGATCGTGACTCAGC
GTGGAAGAAATGCGGATGTGGTCGAGTACACGCTCATGTCGTCTGAGCAC
ACGCCTATTCTGAAAGCCGCTCGCTATTACGGTTTCCGCAATATTCAGAA
TCTCGTCCGCAAGCTGAAACCAGCACGGGCTTCTCGACTTCCAGGCGGTA
ATCGACGACTGCCAGTCGGACGGGGCGCCGCGTCCGGTAGCTCTGGCACA
GACTACGCTTATGTAGAAGTCATGGCATGCCCTGGAGGCTGTACTAATGG
AGGAGGCCAGATACGCATTGAAGATGCTCGCGAAGCCAGCTCGAGCGTGC
AGTCCTCAACGTCGGCTGAAGTGCCCGACTCATCGTCGAAGCCGACACCA
CATGAGCAACGCGCTTGGCTTGCCCGTGTAGACGAGGCATATTATTCTGC
GGAGTCGGACACCGAGTCAGAAGCCGGAAGCCAGTCGCAGCCGCTATCTA
TTCTTGACAAAGAAGACAAAATTCACAATGCCATGCGTTATTGGTCTGAC
TCCATGGGCATCCCGCTCTCGAAGCTTGCCTATACCACATATCGCGAGGT
TGAGAGTGATGTCGGCAAATCCCAGCCTGCTGCGACCGATACAACTCGCA
TTGCTGAGCTTGCTGGGAAGATTGGTGGCGGTTGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010411-T1.utr5p1 | KJC3_010411-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010411-T1.utr3p1 | KJC3_010411-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261P7G |
| DBxref | InterPro:IPR009016 |
| DBxref | InterPro:IPR004108 |
| DBxref | PFAM:PF02906 |
| Product | Cytosolic Fe-S cluster assembly factor nar1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3258946..3261316 + |
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