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KJC3_010412-T1, KJC3_010412-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010412-T1
Unique NameKJC3_010412-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3261467..3262283+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010412-T1 ID=KJC3_010412-T1|Name=KJC3_010412-T1|organism=Aspergillus niger KJC3|type=mRNA|length=817bp|location=Sequence derived from alignment at ch7:3261467..3262283+ (Aspergillus niger KJC3)
GCAACGAACCTCCAACGCAAAAAAGTTCCAGAACAAACCAAACCACCCAA
ACCTTCCATCATCATCTCTCCCACGCCCACTCTACCTCCCAACCGCACCG
ACCAAATCCTCTCTACACACCACCTCGCAGAACCCGGCCACCCGATAAAC
CAGTTACAACACTACAATCCACCATGTCCCGCGAACAATACCAAGTCCCC
AACCTGGGCGGCGGCGCCCAGAACGCCTTCGGTGATGCCGGTGGCCCCAT
GGACGGCCCTGTCGTCGCGTACCTGTGCGGCGAGTGCAACTCTCGTGTTT
CTTTGAAGAGGGGAGATCAGATTCGCTGCAAGGAGTGCGGTCATCGCGTT
TTGTATAAGGAGCGGACGAAGAGGTCAGTCTTTTCTTCTCTTTTTTTCCC
CGGGGGTGTATGTTACGGAGAGAAGGAAGGGAATTTGGGAGGAGAGATGT
GAGGATGAGTTTGAAGAATGCATGCTAACTGGTTTGCTTTGCGATGTGCA
GAATGGTTCAGTTCGAGGCTCGGTGATCGAATAGAAAATGTGATTTGGGT
TGCGCTGGGCTTGCGGGCCTAGGTTGCTTGTTTGACTCATTTATGATGGG
TTGGGTGCATTTGGTGGCGCTTGGAGTTTGCTTTTGTCGTCATATATTAT
TTGTGAAAATTATTGTCTTGATGGGGGTGGGAGGTATGACTGGAGAGTTG
GGAGCAGATGGGCGAGTGGATTATTGTCAAGTGATGTAAGGAAATACCTC
TCCTTCCTTGGTCCAGACAATTATTTCAGCTATGTTCATGGATTCATTAC
TCGAATTTCAATTGTCG
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Coding sequence (CDS) from alignment at ch7:3261467..3262283+

>KJC3_010412-T1 ID=KJC3_010412-T1|Name=KJC3_010412-T1|organism=Aspergillus niger KJC3|type=CDS|length=450bp|location=Sequence derived from alignment at ch7:3261467..3262283+ (Aspergillus niger KJC3)
ATGTCCCGCGAACAATACCAAGTCCCCAACCTGGGCGGCGGCGCCCAGAA
CGCCTTCGGTGATGCCGGTGGCCCCATGGACGGCCCTGTCGTCGCGTACC
TGTGCGGCGAGTGCAACTCTCGTGTTTCTTTGAAGAGGGGAGATCAGATT
CGCTGCAAGGAGTGCGGTCATCGCGTTTTGTATAAGGAGCGGACGAAGAG
AATGGTTCAGTTCGAGGCTCGGTGAATGTCCCGCGAACAATACCAAGTCC
CCAACCTGGGCGGCGGCGCCCAGAACGCCTTCGGTGATGCCGGTGGCCCC
ATGGACGGCCCTGTCGTCGCGTACCTGTGCGGCGAGTGCAACTCTCGTGT
TTCTTTGAAGAGGGGAGATCAGATTCGCTGCAAGGAGTGCGGTCATCGCG
TTTTGTATAAGGAGCGGACGAAGAGAATGGTTCAGTTCGAGGCTCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010412KJC3_010412Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010412-T1.utr5p1KJC3_010412-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010412-T1.exon1KJC3_010412-T1.exon1Aspergillus niger KJC3exon
KJC3_010412-T1.exon2KJC3_010412-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010412-T1.cdsKJC3_010412-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010412-T1.utr3p1KJC3_010412-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010412-T1KJC3_010412-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029040
DBxrefInterPro:IPR006591
DBxrefPFAM:PF03604
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3261467..3262283 +
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