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KJC3_010428-T1, KJC3_010428-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010428-T1
Unique NameKJC3_010428-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3299764..3301709+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010428-T1 ID=KJC3_010428-T1|Name=KJC3_010428-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1946bp|location=Sequence derived from alignment at ch7:3299764..3301709+ (Aspergillus niger KJC3)
GACATTTTTGCTCCGGAGATCGAGTAGAAGTGCGGCTATTGTCACCGGTG
CCCCAACAACACTCCAATTGAGCAAGGTGTTGCTGATAGTGGTGTCAGGG
ACGCTGGATTCTTGCATTGCCTGTTTTTTGTCTTTAATTTCAAGCATGCT
TAAGCAGTAGCTTGCTTGGTATTCCTCACACCATTCACGGTACGACATTG
CGGTATTGCTTTGACATCTCCGATCACGACCGATTGACATCGAAATCCTT
CCAACTTCCTACCTCCGCCACAGCCATTCATACTCAATATGCTTCAAACT
CGGTTGGCCCTGACGGGCCTTCGTCTTCCGTTTAGAACCTTGTCCTCGGC
CGTTTCGTCCCGGGCCTATTCGACTGTCGTCCGCGAGCAAGAGAATCCGT
CCGCTGACGAGCCTGCAAGTTCGACGTTTGACCCCAGTATCGCCTTCGCC
CCTCCACCCACTCGTGATGACGCCGGTATCCTTCTACGTTCCTATACTCC
ACGAACCCCCGGTATCAGACATTTGCGCCGACCGATCAATGACCACCTGT
GGAAAGGACGCCCGGTGCAGAAGCTGACGTTCCCCAAACGAGGTCAAGCC
AAGGGTGGTCGTAACAACTCTGGTAGAGTGACTGTCCGGCATCGTGGTGG
TGGCCACAAGCGCCGTATACGAATGGTTGATTTTGCGCGTGACGCTCCCG
GTCCGCACGTGGTGGAACGTATCGAACATGACCCTGGTCGGAGTGCTCAC
ATTGCTCTTGTCCGTAGCCAGGAGACCAAGAAACTGAGTTATATCCTGGC
TGCGGAGGGTATGCGGGCTGGTGACGTTGTCCACAGTTACATGTCTGGTA
TTCCAGAGGAACTCTGGAAGAGCATGGGAGGTACTGTGGACCCTGGTGTT
CTCGCTGCCAGAACCGCATGGAGAGGAAACTGCTTGCCGCTGCACATGAT
GCCTGTCGGTACTCTGGTCTTCAACGTCGGTTTACGTCCTGGTCAGGGAG
GCCAGCTCTGCCGTAGTGCTGGCACTTTTGCGACAGTCATTGCCAAGGGT
ATCGATATCAAGGCGAAGCGTGATCATTCTGACGGCCAAGAAGGAGAAGC
CGGAGCCGTTGAGCAGAAGCCTCTCACGCAACGCGAGAGGCAAAGAAAGG
AGCGCATCTCTCAACATGTTACCATCCGTCTTCAGAGTGGTGAAGTTCGT
CTGATTCATAAGGACTGCTGCGCGACTGTTGGCGTCGCTAGCAACCCTAA
CCACCAGTACCGCCAGCTTGGTAAGGCTGGTCGCTCTCGTTGGCTCAACA
TTCGGCCTACCGTTCGTGGTCTTGCCATGAACGCCGCCGAACATCCTCAC
GGTGGTGGTCGAGGCAAGTCGAAGGGTAACGTTGACCCGAAGAGTCCTTG
GGGTATGCCGGTATGTATCCTCGCCTCGCTATTCCTTCCTTTGCTTCCAG
GCATCATCCATGCTAATGTCTTCGTTTTTACAGGCGAAATCCGGTTACAA
GACTCGTCCCAAGTGGAAGATCAACAAGGCTGTGGTTCATCCCAGAGAGC
GCAACCAAGGCAAGCGTCGTCGTGGATACCACTAGACGCCGTCGTGAACA
TGAAATTCTACTTTATTCCTTGGACCTTCTTATAGCTATTTCACGGTTAT
ATCAAATGTGATTCTATCACCGCTCGGGGTAAAAGCTGGGTAAAGCAGAG
CATGCATCTTCGGAATCTCCCCATCTGTCGAAGGTCCTTCTTGTGGGTTT
AGATGGTGGGAAGTCATTTCCTGTTCACCTTGTTGTACTATACTTTATTT
TGTCTTGGCTACCATGGGGGATTCCAGCTGTCTATACTCCAGCTCCTTTG
CTTTTTATCCGGGTCTCCTTCATGTGTTGTTTATGCTCCGGCGTTTTTCT
TGTATACTACATGGGTTAGAGTACAATCAATCCTATTACACAGTGC
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Coding sequence (CDS) from alignment at ch7:3299764..3301709+

>KJC3_010428-T1 ID=KJC3_010428-T1|Name=KJC3_010428-T1|organism=Aspergillus niger KJC3|type=CDS|length=1347bp|location=Sequence derived from alignment at ch7:3299764..3301709+ (Aspergillus niger KJC3)
ATGCTTCAAACTCGGTTGGCCCTGACGGGCCTTCGTCTTCCGTTTAGAAC
CTTGTCCTCGGCCGTTTCGTCCCGGGCCTATTCGACTGTCGTCCGCGAGC
AAGAGAATCCGTCCGCTGACGAGCCTGCAAGTTCGACGTTTGACCCCAGT
ATCGCCTTCGCCCCTCCACCCACTCGTGATGACGCCGGTATCCTTCTACG
TTCCTATACTCCACGAACCCCCGGTATCAGACATTTGCGCCGACCGATCA
ATGACCACCTGTGGAAAGGACGCCCGGTGCAGAAGCTGACGTTCCCCAAA
CGAGGTCAAGCCAAGGGTGGTCGTAACAACTCTGGTAGAGTGACTGTCCG
GCATCGTGGTGGTGGCCACAAGCGCCGTATACGAATGGTTGATTTTGCGC
GTGACGCTCCCGGTCCGCACGTGGTGGAACGTATCGAACATGACCCTGGT
CGGAGTGCTCACATTGCTCTTGTCCGTAGCCAGGAGACCAAGAAACTGAG
TTATATCCTGGCTGCGGAGGGTATGCGGGCTGGTGACGTTGTCCACAGTT
ACATGTCTGGTATTCCAGAGGAACTCTGGAAGAGCATGGGAGGTACTGTG
GACCCTGGTGTTCTCGCTGCCAGAACCGCATGGAGAGGAAACTGCTTGCC
GCTGCACATGATGCCTGTCGGTACTCTGGTCTTCAACGTCGGTTTACGTC
CTGGTCAGGGAGGCCAGCTCTGCCGTAGTGCTGGCACTTTTGCGACAGTC
ATTGCCAAGGGTATCGATATCAAGGCGAAGCGTGATCATTCTGACGGCCA
AGAAGGAGAAGCCGGAGCCGTTGAGCAGAAGCCTCTCACGCAACGCGAGA
GGCAAAGAAAGGAGCGCATCTCTCAACATGTTACCATCCGTCTTCAGAGT
GGTGAAGTTCGTCTGATTCATAAGGACTGCTGCGCGACTGTTGGCGTCGC
TAGCAACCCTAACCACCAGTACCGCCAGCTTGGTAAGGCTGGTCGCTCTC
GTTGGCTCAACATTCGGCCTACCGTTCGTGGTCTTGCCATGAACGCCGCC
GAACATCCTCACGGTGGTGGTCGAGGCAAGTCGAAGGGTAACGTTGACCC
GAAGAGTCCTTGGGGTATGCCGGTATGTATCCTCGCCTCGCTATTCCTTC
CTTTGCTTCCAGGCATCATCCATGCTAATGTCTTCGTTTTTACAGGCGAA
ATCCGGTTACAAGACTCGTCCCAAGTGGAAGATCAACAAGGCTGTGGTTC
ATCCCAGAGAGCGCAACCAAGGCAAGCGTCGTCGTGGATACCACTAGACG
CCGTCGTGAACATGAAATTCTACTTTATTCCTTGGACCTTCTTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010428KJC3_010428Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010428-T1.utr5p1KJC3_010428-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010428-T1.exon1KJC3_010428-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010428-T1.cdsKJC3_010428-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010428-T1.utr3p1KJC3_010428-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010428-T1KJC3_010428-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR022666
DBxrefInterPro:IPR014726
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR022669
DBxrefInterPro:IPR002171
DBxrefPFAM:PF03947
DBxrefPFAM:PF00181
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3299764..3301709 +
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