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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3305314..3307068- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010430-T2 ID=KJC3_010430-T2|Name=KJC3_010430-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1755bp|location=Sequence derived from alignment at ch7:3305314..3307068- (Aspergillus niger KJC3)
GACGCCTAGCCAACTGGCGAGTACCAGCATTATGTCATCTCGATTGTGAT
CTTCTATCGCCGAGCTCCAGCCAATCACCGAACGCGCCTCACGGTCTCTG
CGGGCATCGATCGAACATCGCGCGCAAGAGCTCTCTCGAATCTCCCCGCA
ATCCGGCAGCGCCATTTCGCAATTGGTCCTAGAAATTACTTTCGTTACTG
AAGACTTCTTCGCCACTCTTTTTGCAAGGAACTCTCTCCCCACTTTACCA
TCCACAGCCCCGCGGGGCATCAGTTCAGGCTGCTGCTGCCGCAATCGCGA
ACCCGCCAGCAGCAGGAACAATTACACAAGTACTACCTTGACAATGGCGC
CTCCTCGACGGAACCTCCTCCCGAAAGACCGGTTTGGTCTTGCATTTGGT
GGTCTAAAAACACAAAACTACCATGATCCCGCTGCTCGCGGGCCTGGTTC
CCATACGTATATGCCCATCCGACATATTACTATCACAGCAGAGAAGCAAA
ACGCATACTGATGATGGAGGACGACGGAAAATCTAGAATTCGCACAATAG
CCTGGAACCCTACCGGCCAACTCATTGCCACCGGCTCCGCAGACCGTACC
CTTCGAATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCACCGAACT
GCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCCGTTCGAG
ACTCCGAACTGGCTAGCTGCTCTACGGATGGAACCGTTCGCGTTTGGGAT
GTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCGAGGCATT
CACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGCAGGAAGG
TGAGCAAAACACACACGAGCACGAAACCAATGCGCTCAGCATCAGGGACT
TGTCAATTGACCAAACGCCCAATATCTCTAGGACGACACCCTCATACCCA
TCTCCGTCGAATCCCCCTCCACCCCGACCATCCACCCAGACGGACCACTC
AACGCTGCAGCGACGCAACAACAACAGAAGCCCACCTTCACACCATCAAC
CTACACAGCCCTAGAACCACACCCTCAACCCATCCAAACAAACGCAACGA
CCTTCTCACATCACATGTCCACCCCTTCCTCCCCAGACCTCCACCTCTTC
GCCACGACCGGCGAAGGCACCGTCAAAATCATCTCTTACCCGTCCTTTGA
CGTCCTCCACACCCTTCACGCCCACACTTCTGCTTGCCTTTCCATCTCCC
TAGCACCCACAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCTCATC
TCCCTATGGGATACAACAGACTGGATCTGCAAGCGTACCGTTTCGAGCAA
TAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGATTCA
TCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGAGATC
TTCCATGCGGAAACGGGTGAGAGTGTTCATACCGTTCCTACGGGAGGAAA
TGCCAATTCGGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTATTGGC
TTGCATATTCTACTACTGCGGATGGATCGGGGCCAGGCGGTTTGAGAATT
GTAGGGGCTGCGGGTGGAAGTTTGTAGAAACGGCGGTATCCATGGTTCGA
AAAGGTGATATTACTTTGCATCTTTGTGTATGTGTGTCTTGTGGCGTTTG
GTGCGTTGGATGTTTATTTGAGCTTATGATGTCTACGGTAGATATTAAGC
ATTGT back to topCoding sequence (CDS) from alignment at ch7:3305314..3307068- >KJC3_010430-T2 ID=KJC3_010430-T2|Name=KJC3_010430-T2|organism=Aspergillus niger KJC3|type=CDS|length=2070bp|location=Sequence derived from alignment at ch7:3305314..3307068- (Aspergillus niger KJC3)
GACGACACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCGACCAT
CCACCCAGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGC
CCACCTTCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAACCC
ATCCAAACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTC
CCCAGACCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCA
TCTCTTACCCGTCCTTTGACGTCCTCCACACCCTTCACGCCCACACTTCT
GCTTGCCTTTCCATCTCCCTAGCACCCACAGGTCGCTACCTCGCCGTCGG
GGGCAGCGACGCCCTCATCTCCCTATGGGATACAACAGACTGGATCTGCA
AGCGTACCGTTTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGG
AGCTTCGACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGG
TGGTAATGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATA
CCGTTCCTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGG
CATCCTTCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGG
GCCAGGCGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGATGA
TGGAGGACGACGGAAAATCTAGAATTCGCACAATAGCCTGGAACCCTACC
GGCCAACTCATTGCCACCGGCTCCGCAGACCGTACCCTTCGAATCTGGAA
CCCTGAGCGTTCGCAAGTGAAATACTCCACCGAACTGCGCGGCCATACTG
CTGGAATTGAGAAAGTCGTGTTCAACCCCGTTCGAGACTCCGAACTGGCT
AGCTGCTCTACGGATGGAACCGTTCGCGTTTGGGATGTCCGGTCAAAGAC
CTGCGTCAGTCGTCTAGACGTCGGAGGCGAGGCATTCACCTTGTCCTGGT
CTGCTGATGGAAGGGTAATGATCGTTGGCAGGAAGGACGACACCCTCATA
CCCATCTCCGTCGAATCCCCCTCCACCCCGACCATCCACCCAGACGGACC
ACTCAACGCTGCAGCGACGCAACAACAACAGAAGCCCACCTTCACACCAT
CAACCTACACAGCCCTAGAACCACACCCTCAACCCATCCAAACAAACGCA
ACGACCTTCTCACATCACATGTCCACCCCTTCCTCCCCAGACCTCCACCT
CTTCGCCACGACCGGCGAAGGCACCGTCAAAATCATCTCTTACCCGTCCT
TTGACGTCCTCCACACCCTTCACGCCCACACTTCTGCTTGCCTTTCCATC
TCCCTAGCACCCACAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCT
CATCTCCCTATGGGATACAACAGACTGGATCTGCAAGCGTACCGTTTCGA
GCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGA
TTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGA
GATCTTCCATGCGGAAACGGGTGAGAGTGTTCATACCGTTCCTACGGGAG
GAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTAT
TGGCTTGCATATTCTACTACTGCGGATGGATCGGGGCCAGGCGGTTTGAG
AATTGTAGGGGCTGCGGGTGGAAGTTTGTAGATGATGGAGGACGACGGAA
AATCTAGAATTCGCACAATAGCCTGGAACCCTACCGGCCAACTCATTGCC
ACCGGCTCCGCAGACCGTACCCTTCGAATCTGGAACCCTGAGCGTTCGCA
AGTGAAATACTCCACCGAACTGCGCGGCCATACTGCTGGAATTGAGAAAG
TCGTGTTCAACCCCGTTCGAGACTCCGAACTGGCTAGCTGCTCTACGGAT
GGAACCGTTCGCGTTTGGGATGTCCGGTCAAAGACCTGCGTCAGTCGTCT
AGACGTCGGAGGCGAGGCATTCACCTTGTCCTGGTCTGCTGATGGAAGGG
TAATGATCGTTGGCAGGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010430-T2.utr3p1 | KJC3_010430-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010430-T2.utr5p1 | KJC3_010430-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR024977 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12894 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3305314..3307068 - |
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