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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3307222..3309275+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010431-T1 ID=KJC3_010431-T1|Name=KJC3_010431-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2054bp|location=Sequence derived from alignment at ch7:3307222..3309275+ (Aspergillus niger KJC3)
GTGACCCGGCGGAACATTCCAAGCAGCAATTATCCTGCATATCAGCCAGT
AGTGTACGGCGTAACTATACAAGAGCTTTTTGCATCTGTGTGCTTAAATC
CATCAGATATTACTTATTGATGCATCACGCCTTCTATTAGCCGTCCAGTG
TGAGTCGAGCAGCTATTGTATAGGGCCGAAAATTCTCTCCGAGCTCAACC
ACAAATTTCATCTACCGGTATTCAAGACTTGAGCTAGACTGCCGACGGTC
GAATCGACGGATCGCCAGGCTTTGTTATAATCTTCTCAGAAGCATGCTCG
ACTTTGAAGATGATGCGTCTAAGCGCGAAAAATGCTACACCACCATAGGC
CAACTGCCTGCTTTTATCGATCCCAAGCAGCCGCCCACGAAACGGTCCCC
CTGCTCGGCCATCCTTGGCCATCCATTCGTTCACACGGTAAGATACTCTG
TACTCTTTATATATTTCCCGGACTATTATCACTAGGCTCTTATACTGTGG
TTGTGCTGTGACAGTTCCTCATCATATGTATGTTGACACAATATTAGAGA
AACGCTAACTAGTCGATGCGTAGGTTGAAGTCATTTTGCCAAAAGACATT
TTCTCGCATGTGCAACCCCAGCTGCAAAAGCTGCGATATGCTAGAGTTTT
TATGTCGCTATCTTCTCTGCTCGAGGGTGAATTCTTCAATACTTATATCA
AGACCGGTAATTATTGCGTTTTTCACTCTTCGTCGCCTCCTGGCTGGGGC
GCCAAGGCCGATATAGTAGCTAACATACAAGGTATAGGGAATATTCTCAT
GATATCAGAGGGACGCTCAGGCTCAGACAGTGTCTTCACTCTTAAAGATG
GTTTGTAGTCTCCGGCTGTGGTTTTCCTAGCATACTCAGCTAACAGGCCC
CCTAGGCATCCTAAAATTGGAGCTGAGCAAAGAAATCTTCGAAAGAACAG
GGCTTACAGGGAAGCCGGTTCGCAGCGGAGGAAGAAAGCATGCAAAAGAG
AGGTTCAGTATGTTCTTTCCATACCATGCCCCCCAGACCGAGGAGACATG
CTGACAACAAGCCCTGGTAAACAGTCGTGGAAATCAACCTTCGACTTCCC
TCCATGCTTCACGGCAAGAAGGGCTTCGAGAGAATTGTATGGGCTTTCAA
GAACGTTTTGAACCAATCAGTAGCCTGGCTATTCTTCGATCTTACAACTA
GCTCGGGTGGCGTTTCAGAAGGTACTATACCTCATCAGGCGCTCTTCTGC
GGGTTTCTCCCAGGGCCATACACTAAAACATGAGCAGATGACCCCTCCCT
AAAGGGAAACCAGCCCCAAATCATCAATTGCCAGCCTATTCTCACCGAGC
ACTCCAATATCCTTGTCCCTCCTCTCCCTGGAGCAGAAATCACAGACGAG
TCCCGCGGAGCCGCAGAACTAGAAGACCACTGCAACGAGCTCTCCGAATG
GCTTGCAATGGTATCCCTCGAATCGCCTCGCGTGTCGGCTCATGACGATG
TGGATCCCTATCTATGTCGTTACAGTGTACCCGATTCGGATAATGCAAAA
TCCACCAGTCTTGTCAGCCTGAAGTGGCAAGGACTTGTCCCGTCTCGTTG
GATCATCGAATTATTGGTCGCGTTATTGTATGCTCCACATGCCCTGTTAT
GACACCCATCTGATATTGAATAATTTGCTGACTTGGCTTCTTTGCGTTTT
CAGGAAGGAAACTGCTCCCAAGTCTCTTGCCCCGTACGCTTGGTTCGCGC
TTTCTGCGAGTGCGCTGGGAAGAGAAGCCGTGGAGGCACGCGATGGGTAC
ACGGTTATGGTGCTTCCGGCACATGTGCCAAAGCAAGATGTGTTGGGGGT
GCAGGCAGATAGTCCGTCTAAGGGTAATGGCCGGCAATTTATATGTTGGG
AGTACGTCGGTGCTTCGATTCTATGAACTGTTTTATAGTATGCCGCTGTC
CGGTGGGCTCAGGAGTGCAGTTACTGTTGTTCAATATACCCCAAAATCTG
AAAAGTACCTACTACATCTTTGGGCATCCATTACATTATGTGCGACTCTA
ATGA back to topCoding sequence (CDS) from alignment at ch7:3307222..3309275+ >KJC3_010431-T1 ID=KJC3_010431-T1|Name=KJC3_010431-T1|organism=Aspergillus niger KJC3|type=CDS|length=8064bp|location=Sequence derived from alignment at ch7:3307222..3309275+ (Aspergillus niger KJC3)
ATGCTCGACTTTGAAGATGATGCGTCTAAGCGCGAAAAATGCTACACCAC
CATAGGCCAACTGCCTGCTTTTATCGATCCCAAGCAGCCGCCCACGAAAC
GGTCCCCCTGCTCGGCCATCCTTGGCCATCCATTCGTTCACACGGTTGAA
GTCATTTTGCCAAAAGACATTTTCTCGCATGTGCAACCCCAGCTGCAAAA
GCTGCGATATGCTAGAGTTTTTATGTCGCTATCTTCTCTGCTCGAGGGTG
AATTCTTCAATACTTATATCAAGACCGGGAATATTCTCATGATATCAGAG
GGACGCTCAGGCTCAGACAGTGTCTTCACTCTTAAAGATGGCATCCTAAA
ATTGGAGCTGAGCAAAGAAATCTTCGAAAGAACAGGGCTTACAGGGAAGC
CGGTTCGCAGCGGAGGAAGAAAGCATGCAAAAGAGAGGTTCATCGTGGAA
ATCAACCTTCGACTTCCCTCCATGCTTCACGGCAAGAAGGGCTTCGAGAG
AATTGTATGGGCTTTCAAGAACGTTTTGAACCAATCAGTAGCCTGGCTAT
TCTTCGATCTTACAACTAGCTCGGGTGGCGTTTCAGAAGATGACCCCTCC
CTAAAGGGAAACCAGCCCCAAATCATCAATTGCCAGCCTATTCTCACCGA
GCACTCCAATATCCTTGTCCCTCCTCTCCCTGGAGCAGAAATCACAGACG
AGTCCCGCGGAGCCGCAGAACTAGAAGACCACTGCAACGAGCTCTCCGAA
TGGCTTGCAATGGTATCCCTCGAATCGCCTCGCGTGTCGGCTCATGACGA
TGTGGATCCCTATCTATGTCGTTACAGTGTACCCGATTCGGATAATGCAA
AATCCACCAGTCTTGTCAGCCTGAAGTGGCAAGGACTTGTCCCGTCTCGT
TGGATCATCGAATTATTGGTCGCGTTATTGAAGGAAACTGCTCCCAAGTC
TCTTGCCCCGTACGCTTGGTTCGCGCTTTCTGCGAGTGCGCTGGGAAGAG
AAGCCGTGGAGGCACGCGATGGGTACACGGTTATGGTGCTTCCGGCACAT
GTGCCAAAGCAAGATGTGTTGGGGGTGCAGGCAGATAGTCCGTCTAAGGG
TAATGGCCGGCAATTTATATGTTGGGAGTACGTCGGTGCTTCGATTCTAT
GAATGCTCGACTTTGAAGATGATGCGTCTAAGCGCGAAAAATGCTACACC
ACCATAGGCCAACTGCCTGCTTTTATCGATCCCAAGCAGCCGCCCACGAA
ACGGTCCCCCTGCTCGGCCATCCTTGGCCATCCATTCGTTCACACGGTTG
AAGTCATTTTGCCAAAAGACATTTTCTCGCATGTGCAACCCCAGCTGCAA
AAGCTGCGATATGCTAGAGTTTTTATGTCGCTATCTTCTCTGCTCGAGGG
TGAATTCTTCAATACTTATATCAAGACCGGGAATATTCTCATGATATCAG
AGGGACGCTCAGGCTCAGACAGTGTCTTCACTCTTAAAGATGGCATCCTA
AAATTGGAGCTGAGCAAAGAAATCTTCGAAAGAACAGGGCTTACAGGGAA
GCCGGTTCGCAGCGGAGGAAGAAAGCATGCAAAAGAGAGGTTCATCGTGG
AAATCAACCTTCGACTTCCCTCCATGCTTCACGGCAAGAAGGGCTTCGAG
AGAATTGTATGGGCTTTCAAGAACGTTTTGAACCAATCAGTAGCCTGGCT
ATTCTTCGATCTTACAACTAGCTCGGGTGGCGTTTCAGAAGATGACCCCT
CCCTAAAGGGAAACCAGCCCCAAATCATCAATTGCCAGCCTATTCTCACC
GAGCACTCCAATATCCTTGTCCCTCCTCTCCCTGGAGCAGAAATCACAGA
CGAGTCCCGCGGAGCCGCAGAACTAGAAGACCACTGCAACGAGCTCTCCG
AATGGCTTGCAATGGTATCCCTCGAATCGCCTCGCGTGTCGGCTCATGAC
GATGTGGATCCCTATCTATGTCGTTACAGTGTACCCGATTCGGATAATGC
AAAATCCACCAGTCTTGTCAGCCTGAAGTGGCAAGGACTTGTCCCGTCTC
GTTGGATCATCGAATTATTGGTCGCGTTATTGAAGGAAACTGCTCCCAAG
TCTCTTGCCCCGTACGCTTGGTTCGCGCTTTCTGCGAGTGCGCTGGGAAG
AGAAGCCGTGGAGGCACGCGATGGGTACACGGTTATGGTGCTTCCGGCAC
ATGTGCCAAAGCAAGATGTGTTGGGGGTGCAGGCAGATAGTCCGTCTAAG
GGTAATGGCCGGCAATTTATATGTTGGGAGTACGTCGGTGCTTCGATTCT
ATGAATGCTCGACTTTGAAGATGATGCGTCTAAGCGCGAAAAATGCTACA
CCACCATAGGCCAACTGCCTGCTTTTATCGATCCCAAGCAGCCGCCCACG
AAACGGTCCCCCTGCTCGGCCATCCTTGGCCATCCATTCGTTCACACGGT
TGAAGTCATTTTGCCAAAAGACATTTTCTCGCATGTGCAACCCCAGCTGC
AAAAGCTGCGATATGCTAGAGTTTTTATGTCGCTATCTTCTCTGCTCGAG
GGTGAATTCTTCAATACTTATATCAAGACCGGGAATATTCTCATGATATC
AGAGGGACGCTCAGGCTCAGACAGTGTCTTCACTCTTAAAGATGGCATCC
TAAAATTGGAGCTGAGCAAAGAAATCTTCGAAAGAACAGGGCTTACAGGG
AAGCCGGTTCGCAGCGGAGGAAGAAAGCATGCAAAAGAGAGGTTCATCGT
GGAAATCAACCTTCGACTTCCCTCCATGCTTCACGGCAAGAAGGGCTTCG
AGAGAATTGTATGGGCTTTCAAGAACGTTTTGAACCAATCAGTAGCCTGG
CTATTCTTCGATCTTACAACTAGCTCGGGTGGCGTTTCAGAAGATGACCC
CTCCCTAAAGGGAAACCAGCCCCAAATCATCAATTGCCAGCCTATTCTCA
CCGAGCACTCCAATATCCTTGTCCCTCCTCTCCCTGGAGCAGAAATCACA
GACGAGTCCCGCGGAGCCGCAGAACTAGAAGACCACTGCAACGAGCTCTC
CGAATGGCTTGCAATGGTATCCCTCGAATCGCCTCGCGTGTCGGCTCATG
ACGATGTGGATCCCTATCTATGTCGTTACAGTGTACCCGATTCGGATAAT
GCAAAATCCACCAGTCTTGTCAGCCTGAAGTGGCAAGGACTTGTCCCGTC
TCGTTGGATCATCGAATTATTGGTCGCGTTATTGAAGGAAACTGCTCCCA
AGTCTCTTGCCCCGTACGCTTGGTTCGCGCTTTCTGCGAGTGCGCTGGGA
AGAGAAGCCGTGGAGGCACGCGATGGGTACACGGTTATGGTGCTTCCGGC
ACATGTGCCAAAGCAAGATGTGTTGGGGGTGCAGGCAGATAGTCCGTCTA
AGGGTAATGGCCGGCAATTTATATGTTGGGAGTACGTCGGTGCTTCGATT
CTATGAATGCTCGACTTTGAAGATGATGCGTCTAAGCGCGAAAAATGCTA
CACCACCATAGGCCAACTGCCTGCTTTTATCGATCCCAAGCAGCCGCCCA
CGAAACGGTCCCCCTGCTCGGCCATCCTTGGCCATCCATTCGTTCACACG
GTTGAAGTCATTTTGCCAAAAGACATTTTCTCGCATGTGCAACCCCAGCT
GCAAAAGCTGCGATATGCTAGAGTTTTTATGTCGCTATCTTCTCTGCTCG
AGGGTGAATTCTTCAATACTTATATCAAGACCGGGAATATTCTCATGATA
TCAGAGGGACGCTCAGGCTCAGACAGTGTCTTCACTCTTAAAGATGGCAT
CCTAAAATTGGAGCTGAGCAAAGAAATCTTCGAAAGAACAGGGCTTACAG
GGAAGCCGGTTCGCAGCGGAGGAAGAAAGCATGCAAAAGAGAGGTTCATC
GTGGAAATCAACCTTCGACTTCCCTCCATGCTTCACGGCAAGAAGGGCTT
CGAGAGAATTGTATGGGCTTTCAAGAACGTTTTGAACCAATCAGTAGCCT
GGCTATTCTTCGATCTTACAACTAGCTCGGGTGGCGTTTCAGAAGATGAC
CCCTCCCTAAAGGGAAACCAGCCCCAAATCATCAATTGCCAGCCTATTCT
CACCGAGCACTCCAATATCCTTGTCCCTCCTCTCCCTGGAGCAGAAATCA
CAGACGAGTCCCGCGGAGCCGCAGAACTAGAAGACCACTGCAACGAGCTC
TCCGAATGGCTTGCAATGGTATCCCTCGAATCGCCTCGCGTGTCGGCTCA
TGACGATGTGGATCCCTATCTATGTCGTTACAGTGTACCCGATTCGGATA
ATGCAAAATCCACCAGTCTTGTCAGCCTGAAGTGGCAAGGACTTGTCCCG
TCTCGTTGGATCATCGAATTATTGGTCGCGTTATTGAAGGAAACTGCTCC
CAAGTCTCTTGCCCCGTACGCTTGGTTCGCGCTTTCTGCGAGTGCGCTGG
GAAGAGAAGCCGTGGAGGCACGCGATGGGTACACGGTTATGGTGCTTCCG
GCACATGTGCCAAAGCAAGATGTGTTGGGGGTGCAGGCAGATAGTCCGTC
TAAGGGTAATGGCCGGCAATTTATATGTTGGGAGTACGTCGGTGCTTCGA
TTCTATGAATGCTCGACTTTGAAGATGATGCGTCTAAGCGCGAAAAATGC
TACACCACCATAGGCCAACTGCCTGCTTTTATCGATCCCAAGCAGCCGCC
CACGAAACGGTCCCCCTGCTCGGCCATCCTTGGCCATCCATTCGTTCACA
CGGTTGAAGTCATTTTGCCAAAAGACATTTTCTCGCATGTGCAACCCCAG
CTGCAAAAGCTGCGATATGCTAGAGTTTTTATGTCGCTATCTTCTCTGCT
CGAGGGTGAATTCTTCAATACTTATATCAAGACCGGGAATATTCTCATGA
TATCAGAGGGACGCTCAGGCTCAGACAGTGTCTTCACTCTTAAAGATGGC
ATCCTAAAATTGGAGCTGAGCAAAGAAATCTTCGAAAGAACAGGGCTTAC
AGGGAAGCCGGTTCGCAGCGGAGGAAGAAAGCATGCAAAAGAGAGGTTCA
TCGTGGAAATCAACCTTCGACTTCCCTCCATGCTTCACGGCAAGAAGGGC
TTCGAGAGAATTGTATGGGCTTTCAAGAACGTTTTGAACCAATCAGTAGC
CTGGCTATTCTTCGATCTTACAACTAGCTCGGGTGGCGTTTCAGAAGATG
ACCCCTCCCTAAAGGGAAACCAGCCCCAAATCATCAATTGCCAGCCTATT
CTCACCGAGCACTCCAATATCCTTGTCCCTCCTCTCCCTGGAGCAGAAAT
CACAGACGAGTCCCGCGGAGCCGCAGAACTAGAAGACCACTGCAACGAGC
TCTCCGAATGGCTTGCAATGGTATCCCTCGAATCGCCTCGCGTGTCGGCT
CATGACGATGTGGATCCCTATCTATGTCGTTACAGTGTACCCGATTCGGA
TAATGCAAAATCCACCAGTCTTGTCAGCCTGAAGTGGCAAGGACTTGTCC
CGTCTCGTTGGATCATCGAATTATTGGTCGCGTTATTGAAGGAAACTGCT
CCCAAGTCTCTTGCCCCGTACGCTTGGTTCGCGCTTTCTGCGAGTGCGCT
GGGAAGAGAAGCCGTGGAGGCACGCGATGGGTACACGGTTATGGTGCTTC
CGGCACATGTGCCAAAGCAAGATGTGTTGGGGGTGCAGGCAGATAGTCCG
TCTAAGGGTAATGGCCGGCAATTTATATGTTGGGAGTACGTCGGTGCTTC
GATTCTATGAATGCTCGACTTTGAAGATGATGCGTCTAAGCGCGAAAAAT
GCTACACCACCATAGGCCAACTGCCTGCTTTTATCGATCCCAAGCAGCCG
CCCACGAAACGGTCCCCCTGCTCGGCCATCCTTGGCCATCCATTCGTTCA
CACGGTTGAAGTCATTTTGCCAAAAGACATTTTCTCGCATGTGCAACCCC
AGCTGCAAAAGCTGCGATATGCTAGAGTTTTTATGTCGCTATCTTCTCTG
CTCGAGGGTGAATTCTTCAATACTTATATCAAGACCGGGAATATTCTCAT
GATATCAGAGGGACGCTCAGGCTCAGACAGTGTCTTCACTCTTAAAGATG
GCATCCTAAAATTGGAGCTGAGCAAAGAAATCTTCGAAAGAACAGGGCTT
ACAGGGAAGCCGGTTCGCAGCGGAGGAAGAAAGCATGCAAAAGAGAGGTT
CATCGTGGAAATCAACCTTCGACTTCCCTCCATGCTTCACGGCAAGAAGG
GCTTCGAGAGAATTGTATGGGCTTTCAAGAACGTTTTGAACCAATCAGTA
GCCTGGCTATTCTTCGATCTTACAACTAGCTCGGGTGGCGTTTCAGAAGA
TGACCCCTCCCTAAAGGGAAACCAGCCCCAAATCATCAATTGCCAGCCTA
TTCTCACCGAGCACTCCAATATCCTTGTCCCTCCTCTCCCTGGAGCAGAA
ATCACAGACGAGTCCCGCGGAGCCGCAGAACTAGAAGACCACTGCAACGA
GCTCTCCGAATGGCTTGCAATGGTATCCCTCGAATCGCCTCGCGTGTCGG
CTCATGACGATGTGGATCCCTATCTATGTCGTTACAGTGTACCCGATTCG
GATAATGCAAAATCCACCAGTCTTGTCAGCCTGAAGTGGCAAGGACTTGT
CCCGTCTCGTTGGATCATCGAATTATTGGTCGCGTTATTGAAGGAAACTG
CTCCCAAGTCTCTTGCCCCGTACGCTTGGTTCGCGCTTTCTGCGAGTGCG
CTGGGAAGAGAAGCCGTGGAGGCACGCGATGGGTACACGGTTATGGTGCT
TCCGGCACATGTGCCAAAGCAAGATGTGTTGGGGGTGCAGGCAGATAGTC
CGTCTAAGGGTAATGGCCGGCAATTTATATGTTGGGAGTACGTCGGTGCT
TCGATTCTATGAATGCTCGACTTTGAAGATGATGCGTCTAAGCGCGAAAA
ATGCTACACCACCATAGGCCAACTGCCTGCTTTTATCGATCCCAAGCAGC
CGCCCACGAAACGGTCCCCCTGCTCGGCCATCCTTGGCCATCCATTCGTT
CACACGGTTGAAGTCATTTTGCCAAAAGACATTTTCTCGCATGTGCAACC
CCAGCTGCAAAAGCTGCGATATGCTAGAGTTTTTATGTCGCTATCTTCTC
TGCTCGAGGGTGAATTCTTCAATACTTATATCAAGACCGGGAATATTCTC
ATGATATCAGAGGGACGCTCAGGCTCAGACAGTGTCTTCACTCTTAAAGA
TGGCATCCTAAAATTGGAGCTGAGCAAAGAAATCTTCGAAAGAACAGGGC
TTACAGGGAAGCCGGTTCGCAGCGGAGGAAGAAAGCATGCAAAAGAGAGG
TTCATCGTGGAAATCAACCTTCGACTTCCCTCCATGCTTCACGGCAAGAA
GGGCTTCGAGAGAATTGTATGGGCTTTCAAGAACGTTTTGAACCAATCAG
TAGCCTGGCTATTCTTCGATCTTACAACTAGCTCGGGTGGCGTTTCAGAA
GATGACCCCTCCCTAAAGGGAAACCAGCCCCAAATCATCAATTGCCAGCC
TATTCTCACCGAGCACTCCAATATCCTTGTCCCTCCTCTCCCTGGAGCAG
AAATCACAGACGAGTCCCGCGGAGCCGCAGAACTAGAAGACCACTGCAAC
GAGCTCTCCGAATGGCTTGCAATGGTATCCCTCGAATCGCCTCGCGTGTC
GGCTCATGACGATGTGGATCCCTATCTATGTCGTTACAGTGTACCCGATT
CGGATAATGCAAAATCCACCAGTCTTGTCAGCCTGAAGTGGCAAGGACTT
GTCCCGTCTCGTTGGATCATCGAATTATTGGTCGCGTTATTGAAGGAAAC
TGCTCCCAAGTCTCTTGCCCCGTACGCTTGGTTCGCGCTTTCTGCGAGTG
CGCTGGGAAGAGAAGCCGTGGAGGCACGCGATGGGTACACGGTTATGGTG
CTTCCGGCACATGTGCCAAAGCAAGATGTGTTGGGGGTGCAGGCAGATAG
TCCGTCTAAGGGTAATGGCCGGCAATTTATATGTTGGGAGTACGTCGGTG
CTTCGATTCTATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010431-T1.utr5p1 | KJC3_010431-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010431-T1.utr3p1 | KJC3_010431-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013893 |
| DBxref | PFAM:PF08584 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3307222..3309275 + |
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