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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3317508..3320741+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010435-T1 ID=KJC3_010435-T1|Name=KJC3_010435-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3234bp|location=Sequence derived from alignment at ch7:3317508..3320741+ (Aspergillus niger KJC3)
AGTGCACCAACGGCCTGAAAAACCGACTTGGGCTGCAGATTAAAACGACC
TGCCAGGAGTGTGGTCGCTATACAGACAAGATGAAGAGTTTACGGCGAGA
CTTCTCGTCGAATCCGCAGGCAGCAAATGTCACCAGCAAAGTCTTCGTGA
GATCCACGAAAAGCGGAAAAGTTCAAAAGATCGTTCGCGAACTTTACCTC
AGACAAGACATTCCTTGCTCGTCTAAGCTCTGCTCGACTTGCGCATCTAC
TGCACCAGCAGATGCCAATGGAAACAGTGAGACAAGCGGATCAAGATTTT
GCTTCGCTTGATGGCTAATGCGACACAGTCACGCCTTTCGTGCTCTCGGA
GCAGCCCGCGGGCACCAGCGCTTTCCCCCGCGGGCACTACCTTGTCCCCG
ATACGAATGCATTGCTGAATGGCATGGATATTTTCGAACATACCGGAGCC
TTCTACGATGTTATTATCCTCCAAACCGTCCTCGAGGAACTGAAGAACCA
GTCCCTGCCCCTCTACAACCGCCTGCTCTCTCTGATCAAGACCGACGAAA
AGCGGTTTTACCTTTTCTTCAACGAGTTTCGACTGGAAACGCATGTCCGG
AGAGGACCCGATGAGTCGATAAATGACAGGAATGACCGAGCTGTGCGAAC
AGTGGCGAAGTGGTATGCGGAACATCTCAAGACCACGGTGAAGAAGGGGA
AGAAGAACGACATCCCGGCTATCGTTGTCATCACGGACGACAAGGAAAAC
TTGCGCAAAGCAAAGGAGGAGGGAGTAACAGCATTGTCACTGTCAGACTA
TGTGTCCGGCCTAGAGGACTCAGACAGGCTACTTGACATGATCAACGAGT
CTCGGGAGGCAAGGGAAGCGAAAGGCGCACGCGGCGAGCTTTTCTACCCC
GAATACTACTCGATGTCCAAACTTATGACAGGCATTAGAGCTGGAACTTT
GCACCAGGGAGTCTTCAATGTTTCGCCGTACAACTATTTGGAGGGCTCTG
TCAATGTCCCGGCATTTGACAAGCCCTTGCTCATTTTGGGCCGCGACAAC
AGCAACAGAGCCATCTCTGGGGATGTTGTTGTTATTGAAGTACTTCCCAA
GGACCAATGGAAGTCGCCATCTACCAAGATCGTCGATGAAGAGGCGGTGA
CGAAGAATGACAATCCTGATACCGATGATACCGAGGCAGTGGTGTCGGAG
AGGGAACGGAAGGCCTTGCAAGAAGAGGTCAGGAAAGCCCATGGAAAGAG
CTCAGAGGGAAAACCACAACCGACAGCCAAGGTGGTTGGAGTCATGAAAC
GCAACTGGCGTCAATATGTCGGACATGTCGATGCCGGTTCGGCAGGTGCT
CAGGCTAGCAGCGGTCGCCGCCAGCAGACCGTCTTCGTCCTCCCTATGGA
CAAGCGTGTACCTAAGATCCGCGTCCGTACTAGACAAGCTGGTGATCTTA
TGGGTCAACGTATTCTTGTCACCATCGACGCCTGGGACCGTGATTCCCGA
TACCCCACCGGCCATTTCATTCGCTCACTAGGAGAACTGGAGACCAAGGG
TGCGGAGACAGAGGCTCTGCTCCTTGAGTATGACGTTCAGTACAAGCCAT
TCCCGAAGGCTGTTCTCGACTGTCTTCCCGCTGAGGGCCATGACTGGAGG
GTACCGGCTAGCAAGGATAATATCGGCTGGAAGGGACGAAGGGACCTTAG
AGATCTCCTTATCTGCAGTATCGACCCGCCAGGCTGTCAAGATATCGATG
ACGCGCTTCATGCACGACCATTACCGAACGGCAACTTTGAAGTCGGTGTC
CACATTGCAGATGTGTCTCATTTCGTCAAGCCGAACAATGCAATGGACCT
GGAGGCCAGTCTCCGTGGAACAACAGTCTACCTAGTCGACAAGCGTATCG
ATATGCTGCCCCATCTTCTCGGTACAGACCTTTGTTCTCTCAAGCCCTAC
GTTGAGCGATACGCCTTCTCCGTTTTGTGGGAGATGACACCCAACGCAGA
AGTCGTTTCCGCAGATTTCACCAAATCCGTCATCCGTTCTCGCGAAGCCT
TCAGTTACGAAAAGGCGCAGAAGCGCATCGACGATCCTACGCAGAAAGAC
GAACTTACCGAAAGCATGCGCACTCTGCTCCGCTTCTCTAAGATCCTCCG
ACAGAAGCGTATGGACGCAGGTGCGCTGAACCTCGCCTCGCCAGAAGTCC
GGATTGAAACCGACAACGACGAAGTCGGCGACCCTCTCACGGACGTGAAG
ACGAAGGCCATGCTCGAGACCAACAGCCTCGTTGAGGAATTCATGCTTCA
CGCCAACATCACCGTTGCTTCCAAGATCTACAGCACCTTCTCCCAGACCG
CCATGCTCCGACGCCACGCCACCCCTCCTCCGCAAAACTTCGAAGAGCTT
ATCAACCAACTCACCAAGAAGCGCGACATGAGACTGGATGTGTCCAGCTC
CCGTGCTCTCGCCGACTCCCTTGACCGTTGTGTCGACGAGAAGAACCCCT
TCTTCAACACCTTGGTCCGCATTCTCGCCACCCGTTGCATGACTTCCGCG
GAGTACTTCTGCGCAGGGGCCCACGCAGAGTCCGAATTCCGTCATTACGG
TCTAGCCTCACCCATCTACACACACTTCACCTCCCCCATCAGACGTTACG
CAGATCTCTTAGTCCACCGCCAACTCGCGTCAGCAATTGGCTACGAGGGC
GAAGATGGCCGCGCCGTCGTAGAGGGAGTGATGACCCGAAACAGACTCGA
AGATATCTGCCGAAACATCAACTATCGTCATCGCAATGCCCAGTTCGCCG
GCCGCGCCAGCATCGAATATTACGTTGGACAGGCGCTCAAGGCACGCGGA
GAGAAGATGGCAGCCGATGGCGTGGACGGCGGCATCGAAGAGGAGGGCTA
CGTCATGCGTGTCTTCGAGAACGGCGTTGTTGTTTTCGTTCCGCGGTTTG
GTATCGAGGGCGTGGTTCGCTTGGAGGATTTCGTCCTTCCAGATGACGCT
GCTCTCCGCACCGTCGACGAGCGACGGGAGCTGGTGACGCGCCGACAGAG
TGACTTCGACAATGAAGAGTACACTCTCCGCGTTTCCAACAAAGGGAACT
CCGAATCGCAACCCAGCATGAGCGTGGAACTGTTCCAGAAGGTCAACGTC
AACGTTAGCTCCGTGAAAGAAGAAGGTGGTCGCGGTGCAGGAAAGAGGCG
GGTTAGAATCCTGATTCTGGGAAGCGATGCCTAG back to topCoding sequence (CDS) from alignment at ch7:3317508..3320741+ >KJC3_010435-T1 ID=KJC3_010435-T1|Name=KJC3_010435-T1|organism=Aspergillus niger KJC3|type=CDS|length=6204bp|location=Sequence derived from alignment at ch7:3317508..3320741+ (Aspergillus niger KJC3)
ATGAAGAGTTTACGGCGAGACTTCTCGTCGAATCCGCAGGCAGCAAATGT
CACCAGCAAAGTCTTCGTGAGATCCACGAAAAGCGGAAAAGTTCAAAAGA
TCGTTCGCGAACTTTACCTCAGACAAGACATTCCTTGCTCGTCTAAGCTC
TGCTCGACTTGCGCATCTACTGCACCAGCAGATGCCAATGGAAACATCAC
GCCTTTCGTGCTCTCGGAGCAGCCCGCGGGCACCAGCGCTTTCCCCCGCG
GGCACTACCTTGTCCCCGATACGAATGCATTGCTGAATGGCATGGATATT
TTCGAACATACCGGAGCCTTCTACGATGTTATTATCCTCCAAACCGTCCT
CGAGGAACTGAAGAACCAGTCCCTGCCCCTCTACAACCGCCTGCTCTCTC
TGATCAAGACCGACGAAAAGCGGTTTTACCTTTTCTTCAACGAGTTTCGA
CTGGAAACGCATGTCCGGAGAGGACCCGATGAGTCGATAAATGACAGGAA
TGACCGAGCTGTGCGAACAGTGGCGAAGTGGTATGCGGAACATCTCAAGA
CCACGGTGAAGAAGGGGAAGAAGAACGACATCCCGGCTATCGTTGTCATC
ACGGACGACAAGGAAAACTTGCGCAAAGCAAAGGAGGAGGGAGTAACAGC
ATTGTCACTGTCAGACTATGTGTCCGGCCTAGAGGACTCAGACAGGCTAC
TTGACATGATCAACGAGTCTCGGGAGGCAAGGGAAGCGAAAGGCGCACGC
GGCGAGCTTTTCTACCCCGAATACTACTCGATGTCCAAACTTATGACAGG
CATTAGAGCTGGAACTTTGCACCAGGGAGTCTTCAATGTTTCGCCGTACA
ACTATTTGGAGGGCTCTGTCAATGTCCCGGCATTTGACAAGCCCTTGCTC
ATTTTGGGCCGCGACAACAGCAACAGAGCCATCTCTGGGGATGTTGTTGT
TATTGAAGTACTTCCCAAGGACCAATGGAAGTCGCCATCTACCAAGATCG
TCGATGAAGAGGCGGTGACGAAGAATGACAATCCTGATACCGATGATACC
GAGGCAGTGGTGTCGGAGAGGGAACGGAAGGCCTTGCAAGAAGAGGTCAG
GAAAGCCCATGGAAAGAGCTCAGAGGGAAAACCACAACCGACAGCCAAGG
TGGTTGGAGTCATGAAACGCAACTGGCGTCAATATGTCGGACATGTCGAT
GCCGGTTCGGCAGGTGCTCAGGCTAGCAGCGGTCGCCGCCAGCAGACCGT
CTTCGTCCTCCCTATGGACAAGCGTGTACCTAAGATCCGCGTCCGTACTA
GACAAGCTGGTGATCTTATGGGTCAACGTATTCTTGTCACCATCGACGCC
TGGGACCGTGATTCCCGATACCCCACCGGCCATTTCATTCGCTCACTAGG
AGAACTGGAGACCAAGGGTGCGGAGACAGAGGCTCTGCTCCTTGAGTATG
ACGTTCAGTACAAGCCATTCCCGAAGGCTGTTCTCGACTGTCTTCCCGCT
GAGGGCCATGACTGGAGGGTACCGGCTAGCAAGGATAATATCGGCTGGAA
GGGACGAAGGGACCTTAGAGATCTCCTTATCTGCAGTATCGACCCGCCAG
GCTGTCAAGATATCGATGACGCGCTTCATGCACGACCATTACCGAACGGC
AACTTTGAAGTCGGTGTCCACATTGCAGATGTGTCTCATTTCGTCAAGCC
GAACAATGCAATGGACCTGGAGGCCAGTCTCCGTGGAACAACAGTCTACC
TAGTCGACAAGCGTATCGATATGCTGCCCCATCTTCTCGGTACAGACCTT
TGTTCTCTCAAGCCCTACGTTGAGCGATACGCCTTCTCCGTTTTGTGGGA
GATGACACCCAACGCAGAAGTCGTTTCCGCAGATTTCACCAAATCCGTCA
TCCGTTCTCGCGAAGCCTTCAGTTACGAAAAGGCGCAGAAGCGCATCGAC
GATCCTACGCAGAAAGACGAACTTACCGAAAGCATGCGCACTCTGCTCCG
CTTCTCTAAGATCCTCCGACAGAAGCGTATGGACGCAGGTGCGCTGAACC
TCGCCTCGCCAGAAGTCCGGATTGAAACCGACAACGACGAAGTCGGCGAC
CCTCTCACGGACGTGAAGACGAAGGCCATGCTCGAGACCAACAGCCTCGT
TGAGGAATTCATGCTTCACGCCAACATCACCGTTGCTTCCAAGATCTACA
GCACCTTCTCCCAGACCGCCATGCTCCGACGCCACGCCACCCCTCCTCCG
CAAAACTTCGAAGAGCTTATCAACCAACTCACCAAGAAGCGCGACATGAG
ACTGGATGTGTCCAGCTCCCGTGCTCTCGCCGACTCCCTTGACCGTTGTG
TCGACGAGAAGAACCCCTTCTTCAACACCTTGGTCCGCATTCTCGCCACC
CGTTGCATGACTTCCGCGGAGTACTTCTGCGCAGGGGCCCACGCAGAGTC
CGAATTCCGTCATTACGGTCTAGCCTCACCCATCTACACACACTTCACCT
CCCCCATCAGACGTTACGCAGATCTCTTAGTCCACCGCCAACTCGCGTCA
GCAATTGGCTACGAGGGCGAAGATGGCCGCGCCGTCGTAGAGGGAGTGAT
GACCCGAAACAGACTCGAAGATATCTGCCGAAACATCAACTATCGTCATC
GCAATGCCCAGTTCGCCGGCCGCGCCAGCATCGAATATTACGTTGGACAG
GCGCTCAAGGCACGCGGAGAGAAGATGGCAGCCGATGGCGTGGACGGCGG
CATCGAAGAGGAGGGCTACGTCATGCGTGTCTTCGAGAACGGCGTTGTTG
TTTTCGTTCCGCGGTTTGGTATCGAGGGCGTGGTTCGCTTGGAGGATTTC
GTCCTTCCAGATGACGCTGCTCTCCGCACCGTCGACGAGCGACGGGAGCT
GGTGACGCGCCGACAGAGTGACTTCGACAATGAAGAGTACACTCTCCGCG
TTTCCAACAAAGGGAACTCCGAATCGCAACCCAGCATGAGCGTGGAACTG
TTCCAGAAGGTCAACGTCAACGTTAGCTCCGTGAAAGAAGAAGGTGGTCG
CGGTGCAGGAAAGAGGCGGGTTAGAATCCTGATTCTGGGAAGCGATGCCT
AGATGAAGAGTTTACGGCGAGACTTCTCGTCGAATCCGCAGGCAGCAAAT
GTCACCAGCAAAGTCTTCGTGAGATCCACGAAAAGCGGAAAAGTTCAAAA
GATCGTTCGCGAACTTTACCTCAGACAAGACATTCCTTGCTCGTCTAAGC
TCTGCTCGACTTGCGCATCTACTGCACCAGCAGATGCCAATGGAAACATC
ACGCCTTTCGTGCTCTCGGAGCAGCCCGCGGGCACCAGCGCTTTCCCCCG
CGGGCACTACCTTGTCCCCGATACGAATGCATTGCTGAATGGCATGGATA
TTTTCGAACATACCGGAGCCTTCTACGATGTTATTATCCTCCAAACCGTC
CTCGAGGAACTGAAGAACCAGTCCCTGCCCCTCTACAACCGCCTGCTCTC
TCTGATCAAGACCGACGAAAAGCGGTTTTACCTTTTCTTCAACGAGTTTC
GACTGGAAACGCATGTCCGGAGAGGACCCGATGAGTCGATAAATGACAGG
AATGACCGAGCTGTGCGAACAGTGGCGAAGTGGTATGCGGAACATCTCAA
GACCACGGTGAAGAAGGGGAAGAAGAACGACATCCCGGCTATCGTTGTCA
TCACGGACGACAAGGAAAACTTGCGCAAAGCAAAGGAGGAGGGAGTAACA
GCATTGTCACTGTCAGACTATGTGTCCGGCCTAGAGGACTCAGACAGGCT
ACTTGACATGATCAACGAGTCTCGGGAGGCAAGGGAAGCGAAAGGCGCAC
GCGGCGAGCTTTTCTACCCCGAATACTACTCGATGTCCAAACTTATGACA
GGCATTAGAGCTGGAACTTTGCACCAGGGAGTCTTCAATGTTTCGCCGTA
CAACTATTTGGAGGGCTCTGTCAATGTCCCGGCATTTGACAAGCCCTTGC
TCATTTTGGGCCGCGACAACAGCAACAGAGCCATCTCTGGGGATGTTGTT
GTTATTGAAGTACTTCCCAAGGACCAATGGAAGTCGCCATCTACCAAGAT
CGTCGATGAAGAGGCGGTGACGAAGAATGACAATCCTGATACCGATGATA
CCGAGGCAGTGGTGTCGGAGAGGGAACGGAAGGCCTTGCAAGAAGAGGTC
AGGAAAGCCCATGGAAAGAGCTCAGAGGGAAAACCACAACCGACAGCCAA
GGTGGTTGGAGTCATGAAACGCAACTGGCGTCAATATGTCGGACATGTCG
ATGCCGGTTCGGCAGGTGCTCAGGCTAGCAGCGGTCGCCGCCAGCAGACC
GTCTTCGTCCTCCCTATGGACAAGCGTGTACCTAAGATCCGCGTCCGTAC
TAGACAAGCTGGTGATCTTATGGGTCAACGTATTCTTGTCACCATCGACG
CCTGGGACCGTGATTCCCGATACCCCACCGGCCATTTCATTCGCTCACTA
GGAGAACTGGAGACCAAGGGTGCGGAGACAGAGGCTCTGCTCCTTGAGTA
TGACGTTCAGTACAAGCCATTCCCGAAGGCTGTTCTCGACTGTCTTCCCG
CTGAGGGCCATGACTGGAGGGTACCGGCTAGCAAGGATAATATCGGCTGG
AAGGGACGAAGGGACCTTAGAGATCTCCTTATCTGCAGTATCGACCCGCC
AGGCTGTCAAGATATCGATGACGCGCTTCATGCACGACCATTACCGAACG
GCAACTTTGAAGTCGGTGTCCACATTGCAGATGTGTCTCATTTCGTCAAG
CCGAACAATGCAATGGACCTGGAGGCCAGTCTCCGTGGAACAACAGTCTA
CCTAGTCGACAAGCGTATCGATATGCTGCCCCATCTTCTCGGTACAGACC
TTTGTTCTCTCAAGCCCTACGTTGAGCGATACGCCTTCTCCGTTTTGTGG
GAGATGACACCCAACGCAGAAGTCGTTTCCGCAGATTTCACCAAATCCGT
CATCCGTTCTCGCGAAGCCTTCAGTTACGAAAAGGCGCAGAAGCGCATCG
ACGATCCTACGCAGAAAGACGAACTTACCGAAAGCATGCGCACTCTGCTC
CGCTTCTCTAAGATCCTCCGACAGAAGCGTATGGACGCAGGTGCGCTGAA
CCTCGCCTCGCCAGAAGTCCGGATTGAAACCGACAACGACGAAGTCGGCG
ACCCTCTCACGGACGTGAAGACGAAGGCCATGCTCGAGACCAACAGCCTC
GTTGAGGAATTCATGCTTCACGCCAACATCACCGTTGCTTCCAAGATCTA
CAGCACCTTCTCCCAGACCGCCATGCTCCGACGCCACGCCACCCCTCCTC
CGCAAAACTTCGAAGAGCTTATCAACCAACTCACCAAGAAGCGCGACATG
AGACTGGATGTGTCCAGCTCCCGTGCTCTCGCCGACTCCCTTGACCGTTG
TGTCGACGAGAAGAACCCCTTCTTCAACACCTTGGTCCGCATTCTCGCCA
CCCGTTGCATGACTTCCGCGGAGTACTTCTGCGCAGGGGCCCACGCAGAG
TCCGAATTCCGTCATTACGGTCTAGCCTCACCCATCTACACACACTTCAC
CTCCCCCATCAGACGTTACGCAGATCTCTTAGTCCACCGCCAACTCGCGT
CAGCAATTGGCTACGAGGGCGAAGATGGCCGCGCCGTCGTAGAGGGAGTG
ATGACCCGAAACAGACTCGAAGATATCTGCCGAAACATCAACTATCGTCA
TCGCAATGCCCAGTTCGCCGGCCGCGCCAGCATCGAATATTACGTTGGAC
AGGCGCTCAAGGCACGCGGAGAGAAGATGGCAGCCGATGGCGTGGACGGC
GGCATCGAAGAGGAGGGCTACGTCATGCGTGTCTTCGAGAACGGCGTTGT
TGTTTTCGTTCCGCGGTTTGGTATCGAGGGCGTGGTTCGCTTGGAGGATT
TCGTCCTTCCAGATGACGCTGCTCTCCGCACCGTCGACGAGCGACGGGAG
CTGGTGACGCGCCGACAGAGTGACTTCGACAATGAAGAGTACACTCTCCG
CGTTTCCAACAAAGGGAACTCCGAATCGCAACCCAGCATGAGCGTGGAAC
TGTTCCAGAAGGTCAACGTCAACGTTAGCTCCGTGAAAGAAGAAGGTGGT
CGCGGTGCAGGAAAGAGGCGGGTTAGAATCCTGATTCTGGGAAGCGATGC
CTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0004540 | ribonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010435-T1.utr5p1 | KJC3_010435-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260AQB |
| DBxref | InterPro:IPR029060 |
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR022966 |
| DBxref | InterPro:IPR041505 |
| DBxref | InterPro:IPR033770 |
| DBxref | InterPro:IPR033771 |
| DBxref | InterPro:IPR001900 |
| DBxref | InterPro:IPR002716 |
| DBxref | PFAM:PF17215 |
| DBxref | PFAM:PF17216 |
| DBxref | PFAM:PF00773 |
| DBxref | PFAM:PF13638 |
| DBxref | PFAM:PF17849 |
| DBxref | PFAM:PF17876 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3317508..3320741 + |
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