You are here

Home

KJC3_010446-T1, KJC3_010446-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010446-T1
Unique NameKJC3_010446-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3340851..3342139+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010446-T1 ID=KJC3_010446-T1|Name=KJC3_010446-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1289bp|location=Sequence derived from alignment at ch7:3340851..3342139+ (Aspergillus niger KJC3)
CACTAATTTTTCCCTTTCTCTCTTTCACACTCGCTGAGAAAACCTTCCTA
TCGCCTATCATTTTCACGGAAATCTGATTTACGCCGCTTCGCTTCTGCAA
TGCTATCCTGATTACCATCAATGTGACCGTCACCGCTTCAAGCGGTCTGT
CTCAAATTCTTCTCCATCCATTGTCGTGCAGCGTCCCGGATGAGTTGATC
TCATCACGCGTACCTCTTCAAATCACTCCTCTATCTATACATATTCTTAG
CACTGGCTGCGGGATCCGAAGCCATGTCGAACAATGCGGTCTATGCTGTA
CCGCAGGTGAAAACCACCAAAACGTGTATGGCCACTCACTCATCTACAAT
TCTCTTCACTCAGTAAACCCTAACCATCAAATCAATCAAACAGCTTCCAA
GACAACCTTCCACTTCACCGCAGGCCTCTTCTCGGGCCTTACCTCTTCCA
TCCTTCTTCAACCCGCTGATCTTCTCAAAACCCGTGTACAACAATCTCAG
AACGCCTCCCTCCTTCCAACTGTCAAGGCCATCCTTTCCTCCCCAAATCC
AATCCGCAATCTATGGCGTGGTACACTCCCCTCTGCCCTTCGCACGGGCT
TCGGCTCAGCGCTGTATTTCACGAGCTTAAACGCCCTTCGAACGGGTCTC
GTTCAAACAAACGGCATTGCTCCCGTCACCAATAGCTCCTCCGCACTCCC
CAAACTGTCCAACACCGCCAATCTAGCTACCGGGGCTGCCGCGCGGGTTG
CTGCCGGCTTCGTCATGATGCCAGTGACTGTGATAAAAGTTCGCTACGAA
TCAGACTACTACGCCTATCGGAGTCTCTTCGGCGCGGGGCGGGATATAGT
GCGGACAGAGGGATTCCGGGGCCTGTTCTCCGGATTTGGAGCTACAGCGG
CGCGTGATGCGCCGTATGCTGGACTATACGTTTTGTTTTACGAGCAGTTG
AAACGGCGGCTAGCAGGATTATCAAGCTCATCGTCTGATCAGCAGCCACT
GAAGTCGTCCTCAATTAATTTCGTCTCTGGGGGATTGGCGGCCGGGCTGG
CCACTACCATTACAAATCCGTTTGATGCGGTCAAGACCCGATTGCAGTTG
ATGCCGGGGCGGTATGGAAACATGATGCGGGCCGTGAGGTTGATGGTGCA
GGAAGATGGAGTAAGGAGTCTATTTGGGGGGTTGGGGTTGCGGATTACGA
GGAAAGCGCTTAGTTCTGCGCTTGCGTGGACGGTTTACGAGGAGTTGATC
CTGAGGGCCGAAGTCCAGTGGGGATCGAAGGGAGAATAG
back to top

Coding sequence (CDS) from alignment at ch7:3340851..3342139+

>KJC3_010446-T1 ID=KJC3_010446-T1|Name=KJC3_010446-T1|organism=Aspergillus niger KJC3|type=CDS|length=1896bp|location=Sequence derived from alignment at ch7:3340851..3342139+ (Aspergillus niger KJC3)
ATGTCGAACAATGCGGTCTATGCTGTACCGCAGGTGAAAACCACCAAAAC
GTCTTCCAAGACAACCTTCCACTTCACCGCAGGCCTCTTCTCGGGCCTTA
CCTCTTCCATCCTTCTTCAACCCGCTGATCTTCTCAAAACCCGTGTACAA
CAATCTCAGAACGCCTCCCTCCTTCCAACTGTCAAGGCCATCCTTTCCTC
CCCAAATCCAATCCGCAATCTATGGCGTGGTACACTCCCCTCTGCCCTTC
GCACGGGCTTCGGCTCAGCGCTGTATTTCACGAGCTTAAACGCCCTTCGA
ACGGGTCTCGTTCAAACAAACGGCATTGCTCCCGTCACCAATAGCTCCTC
CGCACTCCCCAAACTGTCCAACACCGCCAATCTAGCTACCGGGGCTGCCG
CGCGGGTTGCTGCCGGCTTCGTCATGATGCCAGTGACTGTGATAAAAGTT
CGCTACGAATCAGACTACTACGCCTATCGGAGTCTCTTCGGCGCGGGGCG
GGATATAGTGCGGACAGAGGGATTCCGGGGCCTGTTCTCCGGATTTGGAG
CTACAGCGGCGCGTGATGCGCCGTATGCTGGACTATACGTTTTGTTTTAC
GAGCAGTTGAAACGGCGGCTAGCAGGATTATCAAGCTCATCGTCTGATCA
GCAGCCACTGAAGTCGTCCTCAATTAATTTCGTCTCTGGGGGATTGGCGG
CCGGGCTGGCCACTACCATTACAAATCCGTTTGATGCGGTCAAGACCCGA
TTGCAGTTGATGCCGGGGCGGTATGGAAACATGATGCGGGCCGTGAGGTT
GATGGTGCAGGAAGATGGAGTAAGGAGTCTATTTGGGGGGTTGGGGTTGC
GGATTACGAGGAAAGCGCTTAGTTCTGCGCTTGCGTGGACGGTTTACGAG
GAGTTGATCCTGAGGGCCGAAGTCCAGTGGGGATCGAAGGGAGAATAGAT
GTCGAACAATGCGGTCTATGCTGTACCGCAGGTGAAAACCACCAAAACGT
CTTCCAAGACAACCTTCCACTTCACCGCAGGCCTCTTCTCGGGCCTTACC
TCTTCCATCCTTCTTCAACCCGCTGATCTTCTCAAAACCCGTGTACAACA
ATCTCAGAACGCCTCCCTCCTTCCAACTGTCAAGGCCATCCTTTCCTCCC
CAAATCCAATCCGCAATCTATGGCGTGGTACACTCCCCTCTGCCCTTCGC
ACGGGCTTCGGCTCAGCGCTGTATTTCACGAGCTTAAACGCCCTTCGAAC
GGGTCTCGTTCAAACAAACGGCATTGCTCCCGTCACCAATAGCTCCTCCG
CACTCCCCAAACTGTCCAACACCGCCAATCTAGCTACCGGGGCTGCCGCG
CGGGTTGCTGCCGGCTTCGTCATGATGCCAGTGACTGTGATAAAAGTTCG
CTACGAATCAGACTACTACGCCTATCGGAGTCTCTTCGGCGCGGGGCGGG
ATATAGTGCGGACAGAGGGATTCCGGGGCCTGTTCTCCGGATTTGGAGCT
ACAGCGGCGCGTGATGCGCCGTATGCTGGACTATACGTTTTGTTTTACGA
GCAGTTGAAACGGCGGCTAGCAGGATTATCAAGCTCATCGTCTGATCAGC
AGCCACTGAAGTCGTCCTCAATTAATTTCGTCTCTGGGGGATTGGCGGCC
GGGCTGGCCACTACCATTACAAATCCGTTTGATGCGGTCAAGACCCGATT
GCAGTTGATGCCGGGGCGGTATGGAAACATGATGCGGGCCGTGAGGTTGA
TGGTGCAGGAAGATGGAGTAAGGAGTCTATTTGGGGGGTTGGGGTTGCGG
ATTACGAGGAAAGCGCTTAGTTCTGCGCTTGCGTGGACGGTTTACGAGGA
GTTGATCCTGAGGGCCGAAGTCCAGTGGGGATCGAAGGGAGAATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
Vocabulary: Biological Process
TermDefinition
GO:1904983glycine import into mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0015187glycine transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010446KJC3_010446Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010446-T1.utr5p1KJC3_010446-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010446-T1.exon1KJC3_010446-T1.exon1Aspergillus niger KJC3exon
KJC3_010446-T1.exon2KJC3_010446-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010446-T1.cdsKJC3_010446-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010446-T1KJC3_010446-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR030847
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR018108
DBxrefPFAM:PF00153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3340851..3342139 +
Powered by Drupal