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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3420808..3421959- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010472-T1 ID=KJC3_010472-T1|Name=KJC3_010472-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1152bp|location=Sequence derived from alignment at ch7:3420808..3421959- (Aspergillus niger KJC3)
ATGGTCTATGGTAACAAAACAGCCTACTACAGGGGCATCAAGACGCATGA
GGAACATGCCCGCAAGTTCGGATACCCCATGACTGTGTTGCACAAGCCCA
TCCTTGGTGGCTTTTGGAGTAAGCCTGCCATCCTTCTATCGACGCTCATT
GAGGAAATGGAAAAGCCAGAGGAGGATCGAGCACAATGGCTCTTGTGAGC
GCACTAAGGCATGAAAAGTGAATCAGCAACACCAAGATGAGCTAACATAT
GTTACACAGTTGGTTTGATGGTGACACGGTCATCATGAACTCTAATATAC
CACTTGACGTTTTCCTCCCACCTCCTCAGTTTCCCGATACCCATCTTCTT
ATCGCGAAAGACTGGAATGGCATGAATAACGGTGCTTTCTTTATCCGTGT
TATCCAATGGTCTGTTGAATTCCTTTCTGCTACTCTGGCATATCCAGCCG
TGCATCCCGACATAGTTCTCTTTTGGGCAGACCAATCTGCCATGGCTAAA
CTCAACAGCGAGAACGAGCATTTCTCTCGCTCCATCATCTTTTGCCCCTT
GAGATGGTTCAACGCCTACATGCGAAGCCCTAATGCTGTAGACATCAACC
CAGATTCGCCCGCGCATCTTCAAGTACAACCTGGAGATCTCCTTGTTCAT
TTTCCAGGAACAGATGCAGAGGCCTTGGACAGCACTATGGAACCTTATCT
CGAGGTAGCCGAGTCGCATAACCCAGTCTGGGAATTACCCCTCCATAAGA
CGGGGTACCTGAAAGAGGCAGCAGACTTTTGGCGGGATAAGTATGAGGAG
ATGTTTGGGGAGTCATTTGACCTCTCTCCGACTGGAAATCAATCTTAGTT
AATCCTTGACCGACCGCTCCCCTCAAGGCCAATTGCTCTCTGTATACAGT
GCTTCTGAAAAGTAAAATTACCACTTCACACTAATTCTTCGTTTCAGCGA
CCCCGGGATGAAACAACGCAAAGCCAATTCCGGATACGGAGCTGGAAATT
GTTTGGGCCGCGTATGTATGGAGAAAAGTACAGCCGATGATGATGATGAT
GATGATGATGATGATGATGATGATGATGATGATGATGATGATGTTTTCAT
ATGCTGACCCCTCGCCGTCAGTTAGATTTCAGGTCATATGATACGATGTG
AT back to topCoding sequence (CDS) from alignment at ch7:3420808..3421959- >KJC3_010472-T1 ID=KJC3_010472-T1|Name=KJC3_010472-T1|organism=Aspergillus niger KJC3|type=CDS|length=1566bp|location=Sequence derived from alignment at ch7:3420808..3421959- (Aspergillus niger KJC3)
TTGGTTTGATGGTGACACGGTCATCATGAACTCTAATATACCACTTGACG
TTTTCCTCCCACCTCCTCAGTTTCCCGATACCCATCTTCTTATCGCGAAA
GACTGGAATGGCATGAATAACGGTGCTTTCTTTATCCGTGTTATCCAATG
GTCTGTTGAATTCCTTTCTGCTACTCTGGCATATCCAGCCGTGCATCCCG
ACATAGTTCTCTTTTGGGCAGACCAATCTGCCATGGCTAAACTCAACAGC
GAGAACGAGCATTTCTCTCGCTCCATCATCTTTTGCCCCTTGAGATGGTT
CAACGCCTACATGCGAAGCCCTAATGCTGTAGACATCAACCCAGATTCGC
CCGCGCATCTTCAAGTACAACCTGGAGATCTCCTTGTTCATTTTCCAGGA
ACAGATGCAGAGGCCTTGGACAGCACTATGGAACCTTATCTCGAGGTAGC
CGAGTCGCATAACCCAGTCTGGGAATTACCCCTCCATAAGACGGGGTACC
TGAAAGAGGCAGCAGACTTTTGGCGGGATAAGTATGAGGAGATGTTTGGG
GAGTCATTTGACCTCTCTCCGACTGGAAATCAATCTTAGATGGTCTATGG
TAACAAAACAGCCTACTACAGGGGCATCAAGACGCATGAGGAACATGCCC
GCAAGTTCGGATACCCCATGACTGTGTTGCACAAGCCCATCCTTGGTGGC
TTTTGGAGTAAGCCTGCCATCCTTCTATCGACGCTCATTGAGGAAATGGA
AAAGCCAGAGGAGGATCGAGCACAATGGCTCTTTTGGTTTGATGGTGACA
CGGTCATCATGAACTCTAATATACCACTTGACGTTTTCCTCCCACCTCCT
CAGTTTCCCGATACCCATCTTCTTATCGCGAAAGACTGGAATGGCATGAA
TAACGGTGCTTTCTTTATCCGTGTTATCCAATGGTCTGTTGAATTCCTTT
CTGCTACTCTGGCATATCCAGCCGTGCATCCCGACATAGTTCTCTTTTGG
GCAGACCAATCTGCCATGGCTAAACTCAACAGCGAGAACGAGCATTTCTC
TCGCTCCATCATCTTTTGCCCCTTGAGATGGTTCAACGCCTACATGCGAA
GCCCTAATGCTGTAGACATCAACCCAGATTCGCCCGCGCATCTTCAAGTA
CAACCTGGAGATCTCCTTGTTCATTTTCCAGGAACAGATGCAGAGGCCTT
GGACAGCACTATGGAACCTTATCTCGAGGTAGCCGAGTCGCATAACCCAG
TCTGGGAATTACCCCTCCATAAGACGGGGTACCTGAAAGAGGCAGCAGAC
TTTTGGCGGGATAAGTATGAGGAGATGTTTGGGGAGTCATTTGACCTCTC
TCCGACTGGAAATCAATCTTAGATGGTCTATGGTAACAAAACAGCCTACT
ACAGGGGCATCAAGACGCATGAGGAACATGCCCGCAAGTTCGGATACCCC
ATGACTGTGTTGCACAAGCCCATCCTTGGTGGCTTTTGGAGTAAGCCTGC
CATCCTTCTATCGACGCTCATTGAGGAAATGGAAAAGCCAGAGGAGGATC
GAGCACAATGGCTCTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016757 | transferase activity, transferring glycosyl groups |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010472-T1.utr3p1 | KJC3_010472-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT34 |
| DBxref | InterPro:IPR008630 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3420808..3421959 - |
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