You are here

Home

KJC3_010538-T1, KJC3_010538-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010538-T1
Unique NameKJC3_010538-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3661896..3663211+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010538-T1 ID=KJC3_010538-T1|Name=KJC3_010538-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1316bp|location=Sequence derived from alignment at ch7:3661896..3663211+ (Aspergillus niger KJC3)
CACAAACTTTCCCCTCCTGCTTCGACATGCCCAGGAAAATGTCTGGACTC
GAAAGGAGCTTCAATACCCAAAGTAGGGTTCTCCAGCAGTCAAAAATAAA
ATATTTATGCCCAAAGTGTCTCCAAGGTTTCTCCCGCTCCGACGTTTTAT
ACCAGCATTTCCGACAGAAGGCAGATGCGATCCATAAAGGGCTTGATTCG
AATAAAAGCAATTTCGCACTGTTCCTTTCAAGCTATCAGGGATGTATGGG
AGCTCCGATCCCAGCTGCAAAGCTACCCAAAGCGCCAGATTGTTTTGATG
TTTTTTTTGTGATTGAACACTATGGCGAAGAAACAGAAAGCCCAAACATA
TCAGATTATGGTATGCAGTCTATATATATGTCCCAGTCCATGGATGATTC
CCTTTACTGAAACAAGCATGCTTCAAGCCCACTCCTATACGTCTACTCCT
TCTATGCATTCCTACAGCTTCAACTTCACTGTTCCGCTTTACCATGATCG
CCAGCCGCGTGGCTATGATCATGATTCACATGGAGGTACTGCATTGAGTA
CTATGCCTGGTGAGGATCTGACTACTGTTTAGAGCGACTGCCAGTTTGCT
AAATTTTACCGACAAAGTGCCTGAGCAGCGTGTACGACACCTGCAAATAC
TTCACGATGTAGAAGTGGAGGCTAAGATCTGTGCACTCCTACCTCAAATG
GATAATTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCCTGA
TCTTGGCGTTATTGTTCCGTCTGTGGATGTTGATAGGCCGTTGATCCCAG
TCCGAGACCTGCTATACAAAGGGGTAAGATTCTAAAATATGTTTGGTAAG
TGTTCGTCGCTCATCATCAATAGTTCGGAACATTCTCCCTCATACGCACA
TCCAAGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGT
GCTCAGAGTAGACGGGCCGGGCCTAATCGGCAACCAGAAAGTGGCCATAG
GCGAGTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATC
CTTCTGATCGGCGTTTTCCCAACGGTAATAGTTGGACAGAAGGCTTAGCA
CACAGATTGTCGCGGTGTACTTAATGTGGATGAATTTACACATGGATTGT
TGTCATTGCGGGTGCGGGCTGGCCTGTTGAAGGGGCTTCATTCTGATTAA
TCATCACAGAGCGACAATCTGAGCACTTATCTTCAGACCAATGCACGGTC
GCGGACAGGATAGTCTTGGCACGGACGTACATAGGATGGAGATATGCCCG
TGAAAAGCGTTACCAC
back to top

Coding sequence (CDS) from alignment at ch7:3661896..3663211+

>KJC3_010538-T1 ID=KJC3_010538-T1|Name=KJC3_010538-T1|organism=Aspergillus niger KJC3|type=CDS|length=3588bp|location=Sequence derived from alignment at ch7:3661896..3663211+ (Aspergillus niger KJC3)
ATGCCCAGGAAAATGTCTGGACTCGAAAGGAGCTTCAATACCCAAAGTAG
GGTTCTCCAGCAGTCAAAAATAAAATATTTATGCCCAAAGTGTCTCCAAG
GTTTCTCCCGCTCCGACGTTTTATACCAGCATTTCCGACAGAAGGCAGAT
GCGATCCATAAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCCT
TTCAAGCTATCAGGGATGTATGGGAGCTCCGATCCCAGCTGCAAAGCTAC
CCAAAGCGCCAGATTGTTTTGATGTTTTTTTTGTGATTGAACACTATGGC
GAAGAAACAGAAAGCCCAAACATATCAGATTATGCCCACTCCTATACGTC
TACTCCTTCTATGCATTCCTACAGCTTCAACTTCACTGTTCCGCTTTACC
ATGATCGCCAGCCGCGTGGCTATGATCATGATTCACATGGAGGTACTGCA
TTGAGTACTATGCCTGTGCCTGAGCAGCGTGTACGACACCTGCAAATACT
TCACGATGTAGAAGTGGAGGCTAAGATCTGTGCACTCCTACCTCAAATGG
ATAATTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCCTGAT
CTTGGCGTTATTGTTCCGTCTGTGGATGTTGATAGGCCGTTGATCCCAGT
CCGAGACCTGCTATACAAAGGGTTCGGAACATTCTCCCTCATACGCACAT
CCAAGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGTG
CTCAGAGTAGACGGGCCGGGCCTAATCGGCAACCAGAAAGTGGCCATAGG
CGAGTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATCC
TTCTGATCGGCGTTTTCCCAACGGTAATAGTTGGACAGAAGGCTTAGATG
CCCAGGAAAATGTCTGGACTCGAAAGGAGCTTCAATACCCAAAGTAGGGT
TCTCCAGCAGTCAAAAATAAAATATTTATGCCCAAAGTGTCTCCAAGGTT
TCTCCCGCTCCGACGTTTTATACCAGCATTTCCGACAGAAGGCAGATGCG
ATCCATAAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCCTTTC
AAGCTATCAGGGATGTATGGGAGCTCCGATCCCAGCTGCAAAGCTACCCA
AAGCGCCAGATTGTTTTGATGTTTTTTTTGTGATTGAACACTATGGCGAA
GAAACAGAAAGCCCAAACATATCAGATTATGCCCACTCCTATACGTCTAC
TCCTTCTATGCATTCCTACAGCTTCAACTTCACTGTTCCGCTTTACCATG
ATCGCCAGCCGCGTGGCTATGATCATGATTCACATGGAGGTACTGCATTG
AGTACTATGCCTGTGCCTGAGCAGCGTGTACGACACCTGCAAATACTTCA
CGATGTAGAAGTGGAGGCTAAGATCTGTGCACTCCTACCTCAAATGGATA
ATTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCCTGATCTT
GGCGTTATTGTTCCGTCTGTGGATGTTGATAGGCCGTTGATCCCAGTCCG
AGACCTGCTATACAAAGGGTTCGGAACATTCTCCCTCATACGCACATCCA
AGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGTGCTC
AGAGTAGACGGGCCGGGCCTAATCGGCAACCAGAAAGTGGCCATAGGCGA
GTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATCCTTC
TGATCGGCGTTTTCCCAACGGTAATAGTTGGACAGAAGGCTTAGATGCCC
AGGAAAATGTCTGGACTCGAAAGGAGCTTCAATACCCAAAGTAGGGTTCT
CCAGCAGTCAAAAATAAAATATTTATGCCCAAAGTGTCTCCAAGGTTTCT
CCCGCTCCGACGTTTTATACCAGCATTTCCGACAGAAGGCAGATGCGATC
CATAAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCCTTTCAAG
CTATCAGGGATGTATGGGAGCTCCGATCCCAGCTGCAAAGCTACCCAAAG
CGCCAGATTGTTTTGATGTTTTTTTTGTGATTGAACACTATGGCGAAGAA
ACAGAAAGCCCAAACATATCAGATTATGCCCACTCCTATACGTCTACTCC
TTCTATGCATTCCTACAGCTTCAACTTCACTGTTCCGCTTTACCATGATC
GCCAGCCGCGTGGCTATGATCATGATTCACATGGAGGTACTGCATTGAGT
ACTATGCCTGTGCCTGAGCAGCGTGTACGACACCTGCAAATACTTCACGA
TGTAGAAGTGGAGGCTAAGATCTGTGCACTCCTACCTCAAATGGATAATT
GGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCCTGATCTTGGC
GTTATTGTTCCGTCTGTGGATGTTGATAGGCCGTTGATCCCAGTCCGAGA
CCTGCTATACAAAGGGTTCGGAACATTCTCCCTCATACGCACATCCAAGG
ATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGTGCTCAGA
GTAGACGGGCCGGGCCTAATCGGCAACCAGAAAGTGGCCATAGGCGAGTC
AATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATCCTTCTGA
TCGGCGTTTTCCCAACGGTAATAGTTGGACAGAAGGCTTAGATGCCCAGG
AAAATGTCTGGACTCGAAAGGAGCTTCAATACCCAAAGTAGGGTTCTCCA
GCAGTCAAAAATAAAATATTTATGCCCAAAGTGTCTCCAAGGTTTCTCCC
GCTCCGACGTTTTATACCAGCATTTCCGACAGAAGGCAGATGCGATCCAT
AAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCCTTTCAAGCTA
TCAGGGATGTATGGGAGCTCCGATCCCAGCTGCAAAGCTACCCAAAGCGC
CAGATTGTTTTGATGTTTTTTTTGTGATTGAACACTATGGCGAAGAAACA
GAAAGCCCAAACATATCAGATTATGCCCACTCCTATACGTCTACTCCTTC
TATGCATTCCTACAGCTTCAACTTCACTGTTCCGCTTTACCATGATCGCC
AGCCGCGTGGCTATGATCATGATTCACATGGAGGTACTGCATTGAGTACT
ATGCCTGTGCCTGAGCAGCGTGTACGACACCTGCAAATACTTCACGATGT
AGAAGTGGAGGCTAAGATCTGTGCACTCCTACCTCAAATGGATAATTGGT
TAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCCTGATCTTGGCGTT
ATTGTTCCGTCTGTGGATGTTGATAGGCCGTTGATCCCAGTCCGAGACCT
GCTATACAAAGGGTTCGGAACATTCTCCCTCATACGCACATCCAAGGATG
TTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGTGCTCAGAGTA
GACGGGCCGGGCCTAATCGGCAACCAGAAAGTGGCCATAGGCGAGTCAAT
CTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATCCTTCTGATCG
GCGTTTTCCCAACGGTAATAGTTGGACAGAAGGCTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010538KJC3_010538Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010538-T1KJC3_010538-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010538-T1.utr5p1KJC3_010538-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010538-T1.exon1KJC3_010538-T1.exon1Aspergillus niger KJC3exon
KJC3_010538-T1.exon2KJC3_010538-T1.exon2Aspergillus niger KJC3exon
KJC3_010538-T1.exon3KJC3_010538-T1.exon3Aspergillus niger KJC3exon
KJC3_010538-T1.exon4KJC3_010538-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010538-T1.cdsKJC3_010538-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010538-T1.utr3p1KJC3_010538-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013087
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3661896..3663211 +
Powered by Drupal