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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3687444..3690041+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010542-T1 ID=KJC3_010542-T1|Name=KJC3_010542-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2598bp|location=Sequence derived from alignment at ch7:3687444..3690041+ (Aspergillus niger KJC3)
CTTCACCGTCCTCTCTTCCACGTCCCTGTTCCTATTCTTTCACTCTCCTA
TTCTGCTGTGATCTTTATTGTCCCCCTTTTGACAACAGCTTGTACCGTCT
CTTCTCCCCTGGCCATTCGTTTCGAATTGCTAAGCTCCCCGCCGTCTATC
TTGTCCTTTTCCCCTCTAATTTCCACCGCACATACTTCTTCGGTTTCTGT
AAGCTTTTGCTGAATCGCAACCCTGTTGAAACCCTTCAGATGCATAGCTT
CTGTGCTGTGGACTATATTTCAACTGCTCTTACCACTATTCCGGGTTACT
GGCTCGCCTAGGCGTGCATGACATCCACTCAACTCACACCAGCCATCGCA
TCCTTCTGCCTGCCTATTCCTACACCTGGAAACTGGAGATCCCTCTGCCT
CCACCTCTGATACTCCACCTCTTGTTTTCTCTTTGATTTACAACACACTA
TACTCCGTCCTTGTCATCTTCTATTGTATTCACTCCGATTTTCTCTTTCT
CGCGCCATGGCAACTGTTGCTACGGCGAGGATGATTCGCGGTCAACCGCC
TTCCCCACCTCATTCTACTGATGGAGACCCTGCACCTGAAGTTCATCGAA
ACTCCTGTGGCACGCTCCAGCAAACTTATAGTCATCACAACCCTTATGCT
TCCTCAATGTTACATGGAAACCGTGCGCCTGGAGAGATTTCATACGAACA
CAGATCTCACTCTCTGGTAAACACACCCAACTCCCTCCATGGGCGGTACT
GAAGACTAAATCTGTTCCAGGACTACACTCCTCCTTCATCATCGGAGTAC
GTCTCTTCCGGTGACTACTCTCGGTCCCTGTCAATGCAAGCCCCGGTAAG
TCTTGTCAGTTCTGGATACTCCAGGCCTCCGAGGTGAGCCCTTGTACTGA
TTGTGTCTTAGATGGCAACAAATGGCCTTCAAGTCAACACGCCCCCTTCT
GCTGCAGATGAGGGCCTAGTATCAGACTCGGTACCACAGTGGAGCTCGCC
GCCATCCCAGAGACAGGTGACAAGGGCAAGGGTAGCCAGGTCGCCTAGAG
TGCGTCGCAGGAATAGGAATAGGAAGGATACGAGAGTTGAACTCGAAGGT
CCTCTGAGTGAAGTGACCAAGCATTTGACGAACATCCCTATTCGCGACAT
GGAACGTTGGGTGAATCGCTCAATAGAGGTTCGTCACCAAGAGGTAGCCA
AGAGGAACGGAAAGGTTGCCAGGCCCATGAATTCTTTCATGCTTTATCGA
TCGGCATATGCAGACCGGACAAAGCAATGGTTTGCGCAGAACAATCATCA
AGTGGTTTCCGAAGCAGCGGGTGACAGCTGGAGGCTTGAATCCCCAGAAA
TCCGACAGAAGTACGAGCTTCTGGCGAATATCGAGAAGAGTAATCACCTT
AAGGCGCATCCTGGATACAAGTTCTCGCCGTCAAAGGATAAGAAGAAACG
AGCTGGGAGCGAAGATGTGCGTCCACTGGCCAGCACCCCTGGATCCACTT
CAGCGTTTCTTCAAACCCGTGCCGCAAGCTCTTCGGAAATTGACAGTAGT
GGATGGGAAAGTAGGGACTCGACTCCGTTTGACTTTGCTGACCATGGTTT
ACACTTGCCTGGGGATGCCTACCTATCTTCATCTGCCTGGCATGCTAACC
ATGGGCGGCCGCACCCTGGCATGATTCCCTCCTCTGAACCATCTCACTAC
CTCCATCAAACGATTCATGCAGGTCTCGTCCCGCACGTAGAGGATGTCCG
ATTCAAGAAGACTGGTTTGAACGGAATCCAATATGCTACATCCACGTCAA
CTCCACTGGCTGCTCTACCCGGTGCTACACACCATGATCTTCTTCAACCG
TCCACTTCGTTGCCAGGTGATGGACAACTGGATCCCCAGCTCTTGACCCT
GCAGGTCGAGCTCCAGAGCCCGAATCAGCTCTTTGACAGCTCTCACAGTA
TGTGGCAAGACTCTTCTAATGTCAACTGCTACGCCTCTCCCTCGTCTTCA
TTGGCACCTTACTCAATCCCTTACCCCGCGTCGACCTACCCACAGGGAAT
ACACACCCTAGAGAGCGACCCTGCCCTTGATGGTACCAGTGGGGATTTTG
ACACCTGGATTAACCAGCAGGGCACAACATACTAAGTGTCATCTCAGAAT
CAGTAATCGTTGAACAGACAAAGTGAAATACCCTCCACCACTTCATATGC
TAATAAATACTAGTTTATTTGATGTTTTTCCTTACCTTGTTTTTCCTTTT
TTCCTTGTTATATGGGATGGAAGTTAGTTTATTTTATTTTATTTTTTCTT
GCCTCTCAAAGCGGAGTTCTTGTTGAAGGCGTGGGATTCTCTATTGAATA
TGGCCCGGCGCTCTGTTGTTGGTGATATTGGTCTTAGGTTTGCCTTCGCT
GCACTATTTACTAGGTTCCATCTTTCGGTTTTTTTCTTTGGGTCATGGGG
CATGTTTTGGGATACGTTCAAGGATATGGATATGGATATGGACATGTGCT
TTGTGGGAGGCAGTTTTGTTGGCACTACTGTGCATATCTCATGGTAGTTA
CGGGATTTGATGCATTAGATCACTTGGGCATTGCATGATAACAGGAGG back to topCoding sequence (CDS) from alignment at ch7:3687444..3690041+ >KJC3_010542-T1 ID=KJC3_010542-T1|Name=KJC3_010542-T1|organism=Aspergillus niger KJC3|type=CDS|length=4527bp|location=Sequence derived from alignment at ch7:3687444..3690041+ (Aspergillus niger KJC3)
ATGGCAACTGTTGCTACGGCGAGGATGATTCGCGGTCAACCGCCTTCCCC
ACCTCATTCTACTGATGGAGACCCTGCACCTGAAGTTCATCGAAACTCCT
GTGGCACGCTCCAGCAAACTTATAGTCATCACAACCCTTATGCTTCCTCA
ATGTTACATGGAAACCGTGCGCCTGGAGAGATTTCATACGAACACAGATC
TCACTCTCTGGACTACACTCCTCCTTCATCATCGGAGTACGTCTCTTCCG
GTGACTACTCTCGGTCCCTGTCAATGCAAGCCCCGATGGCAACAAATGGC
CTTCAAGTCAACACGCCCCCTTCTGCTGCAGATGAGGGCCTAGTATCAGA
CTCGGTACCACAGTGGAGCTCGCCGCCATCCCAGAGACAGGTGACAAGGG
CAAGGGTAGCCAGGTCGCCTAGAGTGCGTCGCAGGAATAGGAATAGGAAG
GATACGAGAGTTGAACTCGAAGGTCCTCTGAGTGAAGTGACCAAGCATTT
GACGAACATCCCTATTCGCGACATGGAACGTTGGGTGAATCGCTCAATAG
AGGTTCGTCACCAAGAGGTAGCCAAGAGGAACGGAAAGGTTGCCAGGCCC
ATGAATTCTTTCATGCTTTATCGATCGGCATATGCAGACCGGACAAAGCA
ATGGTTTGCGCAGAACAATCATCAAGTGGTTTCCGAAGCAGCGGGTGACA
GCTGGAGGCTTGAATCCCCAGAAATCCGACAGAAGTACGAGCTTCTGGCG
AATATCGAGAAGAGTAATCACCTTAAGGCGCATCCTGGATACAAGTTCTC
GCCGTCAAAGGATAAGAAGAAACGAGCTGGGAGCGAAGATGTGCGTCCAC
TGGCCAGCACCCCTGGATCCACTTCAGCGTTTCTTCAAACCCGTGCCGCA
AGCTCTTCGGAAATTGACAGTAGTGGATGGGAAAGTAGGGACTCGACTCC
GTTTGACTTTGCTGACCATGGTTTACACTTGCCTGGGGATGCCTACCTAT
CTTCATCTGCCTGGCATGCTAACCATGGGCGGCCGCACCCTGGCATGATT
CCCTCCTCTGAACCATCTCACTACCTCCATCAAACGATTCATGCAGGTCT
CGTCCCGCACGTAGAGGATGTCCGATTCAAGAAGACTGGTTTGAACGGAA
TCCAATATGCTACATCCACGTCAACTCCACTGGCTGCTCTACCCGGTGCT
ACACACCATGATCTTCTTCAACCGTCCACTTCGTTGCCAGGTGATGGACA
ACTGGATCCCCAGCTCTTGACCCTGCAGGTCGAGCTCCAGAGCCCGAATC
AGCTCTTTGACAGCTCTCACAGTATGTGGCAAGACTCTTCTAATGTCAAC
TGCTACGCCTCTCCCTCGTCTTCATTGGCACCTTACTCAATCCCTTACCC
CGCGTCGACCTACCCACAGGGAATACACACCCTAGAGAGCGACCCTGCCC
TTGATGGTACCAGTGGGGATTTTGACACCTGGATTAACCAGCAGGGCACA
ACATACTAAATGGCAACTGTTGCTACGGCGAGGATGATTCGCGGTCAACC
GCCTTCCCCACCTCATTCTACTGATGGAGACCCTGCACCTGAAGTTCATC
GAAACTCCTGTGGCACGCTCCAGCAAACTTATAGTCATCACAACCCTTAT
GCTTCCTCAATGTTACATGGAAACCGTGCGCCTGGAGAGATTTCATACGA
ACACAGATCTCACTCTCTGGACTACACTCCTCCTTCATCATCGGAGTACG
TCTCTTCCGGTGACTACTCTCGGTCCCTGTCAATGCAAGCCCCGATGGCA
ACAAATGGCCTTCAAGTCAACACGCCCCCTTCTGCTGCAGATGAGGGCCT
AGTATCAGACTCGGTACCACAGTGGAGCTCGCCGCCATCCCAGAGACAGG
TGACAAGGGCAAGGGTAGCCAGGTCGCCTAGAGTGCGTCGCAGGAATAGG
AATAGGAAGGATACGAGAGTTGAACTCGAAGGTCCTCTGAGTGAAGTGAC
CAAGCATTTGACGAACATCCCTATTCGCGACATGGAACGTTGGGTGAATC
GCTCAATAGAGGTTCGTCACCAAGAGGTAGCCAAGAGGAACGGAAAGGTT
GCCAGGCCCATGAATTCTTTCATGCTTTATCGATCGGCATATGCAGACCG
GACAAAGCAATGGTTTGCGCAGAACAATCATCAAGTGGTTTCCGAAGCAG
CGGGTGACAGCTGGAGGCTTGAATCCCCAGAAATCCGACAGAAGTACGAG
CTTCTGGCGAATATCGAGAAGAGTAATCACCTTAAGGCGCATCCTGGATA
CAAGTTCTCGCCGTCAAAGGATAAGAAGAAACGAGCTGGGAGCGAAGATG
TGCGTCCACTGGCCAGCACCCCTGGATCCACTTCAGCGTTTCTTCAAACC
CGTGCCGCAAGCTCTTCGGAAATTGACAGTAGTGGATGGGAAAGTAGGGA
CTCGACTCCGTTTGACTTTGCTGACCATGGTTTACACTTGCCTGGGGATG
CCTACCTATCTTCATCTGCCTGGCATGCTAACCATGGGCGGCCGCACCCT
GGCATGATTCCCTCCTCTGAACCATCTCACTACCTCCATCAAACGATTCA
TGCAGGTCTCGTCCCGCACGTAGAGGATGTCCGATTCAAGAAGACTGGTT
TGAACGGAATCCAATATGCTACATCCACGTCAACTCCACTGGCTGCTCTA
CCCGGTGCTACACACCATGATCTTCTTCAACCGTCCACTTCGTTGCCAGG
TGATGGACAACTGGATCCCCAGCTCTTGACCCTGCAGGTCGAGCTCCAGA
GCCCGAATCAGCTCTTTGACAGCTCTCACAGTATGTGGCAAGACTCTTCT
AATGTCAACTGCTACGCCTCTCCCTCGTCTTCATTGGCACCTTACTCAAT
CCCTTACCCCGCGTCGACCTACCCACAGGGAATACACACCCTAGAGAGCG
ACCCTGCCCTTGATGGTACCAGTGGGGATTTTGACACCTGGATTAACCAG
CAGGGCACAACATACTAAATGGCAACTGTTGCTACGGCGAGGATGATTCG
CGGTCAACCGCCTTCCCCACCTCATTCTACTGATGGAGACCCTGCACCTG
AAGTTCATCGAAACTCCTGTGGCACGCTCCAGCAAACTTATAGTCATCAC
AACCCTTATGCTTCCTCAATGTTACATGGAAACCGTGCGCCTGGAGAGAT
TTCATACGAACACAGATCTCACTCTCTGGACTACACTCCTCCTTCATCAT
CGGAGTACGTCTCTTCCGGTGACTACTCTCGGTCCCTGTCAATGCAAGCC
CCGATGGCAACAAATGGCCTTCAAGTCAACACGCCCCCTTCTGCTGCAGA
TGAGGGCCTAGTATCAGACTCGGTACCACAGTGGAGCTCGCCGCCATCCC
AGAGACAGGTGACAAGGGCAAGGGTAGCCAGGTCGCCTAGAGTGCGTCGC
AGGAATAGGAATAGGAAGGATACGAGAGTTGAACTCGAAGGTCCTCTGAG
TGAAGTGACCAAGCATTTGACGAACATCCCTATTCGCGACATGGAACGTT
GGGTGAATCGCTCAATAGAGGTTCGTCACCAAGAGGTAGCCAAGAGGAAC
GGAAAGGTTGCCAGGCCCATGAATTCTTTCATGCTTTATCGATCGGCATA
TGCAGACCGGACAAAGCAATGGTTTGCGCAGAACAATCATCAAGTGGTTT
CCGAAGCAGCGGGTGACAGCTGGAGGCTTGAATCCCCAGAAATCCGACAG
AAGTACGAGCTTCTGGCGAATATCGAGAAGAGTAATCACCTTAAGGCGCA
TCCTGGATACAAGTTCTCGCCGTCAAAGGATAAGAAGAAACGAGCTGGGA
GCGAAGATGTGCGTCCACTGGCCAGCACCCCTGGATCCACTTCAGCGTTT
CTTCAAACCCGTGCCGCAAGCTCTTCGGAAATTGACAGTAGTGGATGGGA
AAGTAGGGACTCGACTCCGTTTGACTTTGCTGACCATGGTTTACACTTGC
CTGGGGATGCCTACCTATCTTCATCTGCCTGGCATGCTAACCATGGGCGG
CCGCACCCTGGCATGATTCCCTCCTCTGAACCATCTCACTACCTCCATCA
AACGATTCATGCAGGTCTCGTCCCGCACGTAGAGGATGTCCGATTCAAGA
AGACTGGTTTGAACGGAATCCAATATGCTACATCCACGTCAACTCCACTG
GCTGCTCTACCCGGTGCTACACACCATGATCTTCTTCAACCGTCCACTTC
GTTGCCAGGTGATGGACAACTGGATCCCCAGCTCTTGACCCTGCAGGTCG
AGCTCCAGAGCCCGAATCAGCTCTTTGACAGCTCTCACAGTATGTGGCAA
GACTCTTCTAATGTCAACTGCTACGCCTCTCCCTCGTCTTCATTGGCACC
TTACTCAATCCCTTACCCCGCGTCGACCTACCCACAGGGAATACACACCC
TAGAGAGCGACCCTGCCCTTGATGGTACCAGTGGGGATTTTGACACCTGG
ATTAACCAGCAGGGCACAACATACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010542-T1.utr5p1 | KJC3_010542-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010542-T1.utr3p1 | KJC3_010542-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036910 |
| DBxref | InterPro:IPR009071 |
| DBxref | PFAM:PF00505 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3687444..3690041 + |
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