You are here

Home

KJC3_010548-T1, KJC3_010548-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010548-T1
Unique NameKJC3_010548-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3710613..3711963+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010548-T1 ID=KJC3_010548-T1|Name=KJC3_010548-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1351bp|location=Sequence derived from alignment at ch7:3710613..3711963+ (Aspergillus niger KJC3)
ATGGCTTCCCACGCCCCCGCCTCAACAGCCATCGGCTCCAGTGAATTCGA
TTCCCAGCGACAACAACAACAGCAGCAACAATCCCAGTCCCCTTCCGCAG
GACTTTGTGCTCTTTCCCGCTCCGTGTCCCCCGCCGCAACCCAGGGACTC
GCGTGCTCAAGCACCGATCAATTCTGCCCCTAGATTATCCGCATATCAAC
CTTCTCTGGTCCAACCAGGGTATCCTGTTAGACGACACTCTTCAGCTTTG
TATCAGCAGCTTCCAGGCTCGCCTGCCCAGGTTCCTCTTTCGGCCAGATT
AGCCGCTCAATCTTCCGGATATTCCTCGTCTCCGTCTTCTTGGTCTCACC
CCTCTCTGCGAAAGCATTTTGCGCGTCGGTTCGCAACACCTGCCGCTTCG
AATTCTACTCCTGCAGTGAACAACACTGCTCATTCTAACCGCCCACCCGT
CCCCCTATTTAACGACAAGACGGTCAATTATTCCGCCTTTGTGAATCAGC
ACAATCAAAACTTGTTGAAGAGAAAATACGCTTCATATCTGAAGCATCGC
CGCATCATGTCTACCCCGAACATCGCTCAAGGTAAGCCTGTCACATGGGC
AGTGCACGCTTATGTATACGGTGCTAAGACAGTCCTAGATTTCCCTGAGC
TTTTTGATCTCCAGTCCAACCGCTTTGGGGACGATCTCAGCTCCCCAGAG
TCCAACATGCTTTCGCCCCAGATCAACACTTCGTTCTTCAGCCCGATGGG
TGAGGTGGCCCCTCCGGGCACCGTCTCGCCGAAGGACCTGTTCTTCGACG
CTTCGGCTCCCCCATCGACGACTTTCACTGATCTCAGCACTCCCCCGCTG
GATACGCCTGGCTTCTTCAGTCAGAACACATCTCCCATGATCAATACCGA
GATGGATCTGAACGCTGTGCCCGAGGAGTGGGAGAGTCTGTTCCCTCAGG
ATGGGTTTTCCCTGGACCTGGATTCGGCTGCCCTTGAGCTTGCTGCTTCG
CTTCAACAGCCCAAGGCAACCGGACCCCCTCCGACTCCAGTGATCCGTGC
CAGCGCCTCGCCCGCGCCGTCTGCGTCTCCTGCCCCATCCCGTCAGGGCA
CCAAGCACTCCACAGTGGCCGGTGTCAATGCTCGCCAGCGCAAGCCGTTG
CCTCCGATCAAGTTTGACTCTGCCGACCCCGCCGCAATGAAGAGGGCTCG
CAATACCGAGGCTGCTCGCAAATCTCGCGCTCGCAAGCTTGAGCGTCAAG
GCGAGATGGAGCGCCGTATTGAGGAGCTCGAGCGGATGCTTGAAGAGTCC
AAGCAACGCGAGGAGTACTGGCGAAGCATGGCCAAGACTGGCACTAACTG
A
back to top

Coding sequence (CDS) from alignment at ch7:3710613..3711963+

>KJC3_010548-T1 ID=KJC3_010548-T1|Name=KJC3_010548-T1|organism=Aspergillus niger KJC3|type=CDS|length=3645bp|location=Sequence derived from alignment at ch7:3710613..3711963+ (Aspergillus niger KJC3)
ATGGCTTCCCACGCCCCCGCCTCAACAGCCATCGGCTCCAGTGAATTCGA
TTCCCAGCGACAACAACAACAGCAGCAACAATCCCAGTCCCCTTCCGCAG
GACTTTGTGCTCTTTCCCGCTCCGTGTCCCCCGCCGCAACCCAGGGACTC
GCACGACACTCTTCAGCTTTGTATCAGCAGCTTCCAGGCTCGCCTGCCCA
GGTTCCTCTTTCGGCCAGATTAGCCGCTCAATCTTCCGGATATTCCTCGT
CTCCGTCTTCTTGGTCTCACCCCTCTCTGCGAAAGCATTTTGCGCGTCGG
TTCGCAACACCTGCCGCTTCGAATTCTACTCCTGCAGTGAACAACACTGC
TCATTCTAACCGCCCACCCGTCCCCCTATTTAACGACAAGACGGTCAATT
ATTCCGCCTTTGTGAATCAGCACAATCAAAACTTGTTGAAGAGAAAATAC
GCTTCATATCTGAAGCATCGCCGCATCATGTCTACCCCGAACATCGCTCA
AGATTTCCCTGAGCTTTTTGATCTCCAGTCCAACCGCTTTGGGGACGATC
TCAGCTCCCCAGAGTCCAACATGCTTTCGCCCCAGATCAACACTTCGTTC
TTCAGCCCGATGGGTGAGGTGGCCCCTCCGGGCACCGTCTCGCCGAAGGA
CCTGTTCTTCGACGCTTCGGCTCCCCCATCGACGACTTTCACTGATCTCA
GCACTCCCCCGCTGGATACGCCTGGCTTCTTCAGTCAGAACACATCTCCC
ATGATCAATACCGAGATGGATCTGAACGCTGTGCCCGAGGAGTGGGAGAG
TCTGTTCCCTCAGGATGGGTTTTCCCTGGACCTGGATTCGGCTGCCCTTG
AGCTTGCTGCTTCGCTTCAACAGCCCAAGGCAACCGGACCCCCTCCGACT
CCAGTGATCCGTGCCAGCGCCTCGCCCGCGCCGTCTGCGTCTCCTGCCCC
ATCCCGTCAGGGCACCAAGCACTCCACAGTGGCCGGTGTCAATGCTCGCC
AGCGCAAGCCGTTGCCTCCGATCAAGTTTGACTCTGCCGACCCCGCCGCA
ATGAAGAGGGCTCGCAATACCGAGGCTGCTCGCAAATCTCGCGCTCGCAA
GCTTGAGCGTCAAGGCGAGATGGAGCGCCGTATTGAGGAGCTCGAGCGGA
TGCTTGAAGAGTCCAAGCAACGCGAGGAGTACTGGCGAAGCATGGCCAAG
ACTGGCACTAACTGAATGGCTTCCCACGCCCCCGCCTCAACAGCCATCGG
CTCCAGTGAATTCGATTCCCAGCGACAACAACAACAGCAGCAACAATCCC
AGTCCCCTTCCGCAGGACTTTGTGCTCTTTCCCGCTCCGTGTCCCCCGCC
GCAACCCAGGGACTCGCACGACACTCTTCAGCTTTGTATCAGCAGCTTCC
AGGCTCGCCTGCCCAGGTTCCTCTTTCGGCCAGATTAGCCGCTCAATCTT
CCGGATATTCCTCGTCTCCGTCTTCTTGGTCTCACCCCTCTCTGCGAAAG
CATTTTGCGCGTCGGTTCGCAACACCTGCCGCTTCGAATTCTACTCCTGC
AGTGAACAACACTGCTCATTCTAACCGCCCACCCGTCCCCCTATTTAACG
ACAAGACGGTCAATTATTCCGCCTTTGTGAATCAGCACAATCAAAACTTG
TTGAAGAGAAAATACGCTTCATATCTGAAGCATCGCCGCATCATGTCTAC
CCCGAACATCGCTCAAGATTTCCCTGAGCTTTTTGATCTCCAGTCCAACC
GCTTTGGGGACGATCTCAGCTCCCCAGAGTCCAACATGCTTTCGCCCCAG
ATCAACACTTCGTTCTTCAGCCCGATGGGTGAGGTGGCCCCTCCGGGCAC
CGTCTCGCCGAAGGACCTGTTCTTCGACGCTTCGGCTCCCCCATCGACGA
CTTTCACTGATCTCAGCACTCCCCCGCTGGATACGCCTGGCTTCTTCAGT
CAGAACACATCTCCCATGATCAATACCGAGATGGATCTGAACGCTGTGCC
CGAGGAGTGGGAGAGTCTGTTCCCTCAGGATGGGTTTTCCCTGGACCTGG
ATTCGGCTGCCCTTGAGCTTGCTGCTTCGCTTCAACAGCCCAAGGCAACC
GGACCCCCTCCGACTCCAGTGATCCGTGCCAGCGCCTCGCCCGCGCCGTC
TGCGTCTCCTGCCCCATCCCGTCAGGGCACCAAGCACTCCACAGTGGCCG
GTGTCAATGCTCGCCAGCGCAAGCCGTTGCCTCCGATCAAGTTTGACTCT
GCCGACCCCGCCGCAATGAAGAGGGCTCGCAATACCGAGGCTGCTCGCAA
ATCTCGCGCTCGCAAGCTTGAGCGTCAAGGCGAGATGGAGCGCCGTATTG
AGGAGCTCGAGCGGATGCTTGAAGAGTCCAAGCAACGCGAGGAGTACTGG
CGAAGCATGGCCAAGACTGGCACTAACTGAATGGCTTCCCACGCCCCCGC
CTCAACAGCCATCGGCTCCAGTGAATTCGATTCCCAGCGACAACAACAAC
AGCAGCAACAATCCCAGTCCCCTTCCGCAGGACTTTGTGCTCTTTCCCGC
TCCGTGTCCCCCGCCGCAACCCAGGGACTCGCACGACACTCTTCAGCTTT
GTATCAGCAGCTTCCAGGCTCGCCTGCCCAGGTTCCTCTTTCGGCCAGAT
TAGCCGCTCAATCTTCCGGATATTCCTCGTCTCCGTCTTCTTGGTCTCAC
CCCTCTCTGCGAAAGCATTTTGCGCGTCGGTTCGCAACACCTGCCGCTTC
GAATTCTACTCCTGCAGTGAACAACACTGCTCATTCTAACCGCCCACCCG
TCCCCCTATTTAACGACAAGACGGTCAATTATTCCGCCTTTGTGAATCAG
CACAATCAAAACTTGTTGAAGAGAAAATACGCTTCATATCTGAAGCATCG
CCGCATCATGTCTACCCCGAACATCGCTCAAGATTTCCCTGAGCTTTTTG
ATCTCCAGTCCAACCGCTTTGGGGACGATCTCAGCTCCCCAGAGTCCAAC
ATGCTTTCGCCCCAGATCAACACTTCGTTCTTCAGCCCGATGGGTGAGGT
GGCCCCTCCGGGCACCGTCTCGCCGAAGGACCTGTTCTTCGACGCTTCGG
CTCCCCCATCGACGACTTTCACTGATCTCAGCACTCCCCCGCTGGATACG
CCTGGCTTCTTCAGTCAGAACACATCTCCCATGATCAATACCGAGATGGA
TCTGAACGCTGTGCCCGAGGAGTGGGAGAGTCTGTTCCCTCAGGATGGGT
TTTCCCTGGACCTGGATTCGGCTGCCCTTGAGCTTGCTGCTTCGCTTCAA
CAGCCCAAGGCAACCGGACCCCCTCCGACTCCAGTGATCCGTGCCAGCGC
CTCGCCCGCGCCGTCTGCGTCTCCTGCCCCATCCCGTCAGGGCACCAAGC
ACTCCACAGTGGCCGGTGTCAATGCTCGCCAGCGCAAGCCGTTGCCTCCG
ATCAAGTTTGACTCTGCCGACCCCGCCGCAATGAAGAGGGCTCGCAATAC
CGAGGCTGCTCGCAAATCTCGCGCTCGCAAGCTTGAGCGTCAAGGCGAGA
TGGAGCGCCGTATTGAGGAGCTCGAGCGGATGCTTGAAGAGTCCAAGCAA
CGCGAGGAGTACTGGCGAAGCATGGCCAAGACTGGCACTAACTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010548KJC3_010548Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010548-T1.exon1KJC3_010548-T1.exon1Aspergillus niger KJC3exon
KJC3_010548-T1.exon2KJC3_010548-T1.exon2Aspergillus niger KJC3exon
KJC3_010548-T1.exon3KJC3_010548-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010548-T1.cdsKJC3_010548-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010548-T1KJC3_010548-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004827
DBxrefPFAM:PF07716
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3710613..3711963 +
Powered by Drupal