You are here

Home

KJC3_010549-T1, KJC3_010549-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010549-T1
Unique NameKJC3_010549-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3712568..3715126-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010549-T1 ID=KJC3_010549-T1|Name=KJC3_010549-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2559bp|location=Sequence derived from alignment at ch7:3712568..3715126- (Aspergillus niger KJC3)
CGCCAGCGTCTCGCTTGCGGCTTGTTTGCTACCATGTGTGGTATTTTCTT
TTCTCTAAGCGCATCAGGAGCTGTGCTCCCTAATGAGGAGACTTGCTGCT
TGTTGCGGAAAAGAGGACCTGATAACTACCATGTTCATAATGTTGAACAG
AAGATAGCCAATACACGGTCAAGCAATGAAGAACCCACTGCTGTTCAGCT
TACCTTTGTTTCCACAGTCTTGTCGATGAGAGGAGGCTGCCTTGTTCCCC
AGCCACTGGTGGATCTCACTACGCAGTCCGTGTTATGCTACAATGGAGAC
GCCTGGAAGATATCAGGTGAACCTATCCAGGGCAACGATGCGGAGCTGAT
CTTTAAGCTGTTACTGCAGGCTGTAAAGCACCATTCGAAAACAACTTCGT
CAGCGGACTCGGGTACGACTGCTGTTCAAGGTGTTCTGGATGTCATCAGT
AGCATTTCCGGCCCCTTTGCCTTCGTGTTCTATGATGCGATCAACTCAAA
ACTGTTCTTCACCAGAGATTCACTTGGAAGACGCTCTCTACTCCAAGGTG
TTGATGAGTCAGGGGCCTTTAAGCTGTGCAGTCTCTGCGACGGCACATCT
TCGACCCTCTTTAGTGAGGTCGAGACAGACGGAGTGTATATGATTGACTT
TGAACATGCTATATTCCAGGATAACTGGATCGCAACGAGGAGCGCTGGCG
CGCCTTTGTTCGATGCAAGTTGCATACAGACACTTTCTTGGGAACATAAC
ACATCCGATCTTCCTCTTCGTCCTGTATGCACTTCTTCCTCATCCTGATC
TTACCTAGCTAACAGAGGTTCAGAGAAACCCCGTTCCTCCAATGAACAAA
TCCACACCCAATGGAGAAGCTCCTTCACTAACCGTTGAAACTGTCGCTGT
CAGGGAACTTGAGCATAAGTTGCGTCAGTCCTTAGCATTGCGAATCCAGA
ATGTACGAGAACCTCCGACTGCTTCATCAGGGAGCAATGTGAAAGTGGCT
GTGCTGTTTTCCGGTGGGCTCGACTGCACATTGCTCGCCAGGCTCTCTCA
TGAGATCCTGCCAAAGGAGGAAGTCATTGACTTGCTCAACGTGGCATTCG
AAAACCCGCGCGTTGCGGCCGCCGCGGCGGGCAAGGGAGGTGCCACTGGC
TCCGTGTATGAAAGCTGCCCCGATCGTATAACCGGCCGGGCGGCATTTGC
AGAGTTGCAAAGAGTTTGCCCCGACCGCAATTGGCGATTTGTTGCAGTCG
ATGTACCGTACGAGGAAACCCTTGCGCATCGTGAGACTGTCAAGCGTCTG
ATGAGACCCCACAATACCGAGATGGATTTGTCCATCGCTTGCGCATTATA
TTTTGCTTCGCGTGGGCAAGGGCTGGCATTCGACAGTCGACAGATCGACG
CTCAACCCACGCAATATGCCACTTCGGCACGGGTGCTCCTGTCTGGCCTT
GGCGCAGATGAGCTATTTGCAGGATACTCGAGACATGGAGCAGCATTTTC
TCGCGATGGATTCACGGGCCTCATTGACGAGATCAATCTTGACGTCAGCC
GCCTTGGAAAGCGAAACCTGGGCCGTGACAATCGAGTCATTGCACACTGG
GGTCGCGAAGCGAGGTTTCCCTTTCTAGACGAAGAGTTCGTGTCCTGGGT
GGTGCAGCTCCCAGTCTGGGAGAAATGCGGATTCGGCACCCCTTCACCAC
CAACGGATTCACCAGAGGCAGGGCTCGATTCGGAGAAAAAGGCCCTTCGC
CTGGTCGCACTGAGACTCGGCATGACGAACGTCGCCCGGGAGAAGAAGCG
AGCAATCCAGTTTGGTTCCAGGACAGCCAAGATGGAGAAGAGCAAAGTGA
AAGGGACCGATGCACTTACCTGAATAGATTTCCTTTCTTTTCCTTTTTCT
CCCTTCAACCCCCCCTCTCCAAAAACCCCCAGTACGTCATTTGACGTACA
ACAACATACCTTCGCCCCCAATCACATCAACCCAGACCAGCAATGATGAC
AACTCCGGATCAGATACTTCTGAGACCGCCTCTTCGATCTATGCTCTTCA
TCCACCACTCTTTCGCTTCGGCCCTCAGGCAGACACGGCTCCAGTAATCC
CCACAGCACACTCATCGCCACATCTGTTCTTTTTCTCACGTGCGAATGCA
ACCGCCTTTCCATCATCTAGGGGACTCCCTGCACCGTGAACGGAGCGGGA
TCTCAAGCACTGATGGAAACAGGACCGGTACTTCTCACGCACTGTAGTTG
GCGCTTTCTACGAAAGCATTCATATGAGTGTGCTGGTATACTGGATGCCT
TTTCTGTTTGTTGGTTGAGCGCGAGGGTATGGATGGTTCGGGCAAGCAAG
AGGTTGTTTGTCCATGAAGTAGATAAAAAGGCAAGTCTGAGCTGAGTCGA
TTGCACACACATATACAGATGCACATACATAAAACACAGAGGTGTAGATA
GTTTATGAGTGGCGCTGGCTTGATCAGTGGCCTTGTGTACGATAGTGAAA
CCTACATAGACTTGGTGCTAGGTATCGAGTGTCATTTCATACTACGTGAA
CGGTAAAGG
back to top

Coding sequence (CDS) from alignment at ch7:3712568..3715126-

>KJC3_010549-T1 ID=KJC3_010549-T1|Name=KJC3_010549-T1|organism=Aspergillus niger KJC3|type=CDS|length=3582bp|location=Sequence derived from alignment at ch7:3712568..3715126- (Aspergillus niger KJC3)
AGAAACCCCGTTCCTCCAATGAACAAATCCACACCCAATGGAGAAGCTCC
TTCACTAACCGTTGAAACTGTCGCTGTCAGGGAACTTGAGCATAAGTTGC
GTCAGTCCTTAGCATTGCGAATCCAGAATGTACGAGAACCTCCGACTGCT
TCATCAGGGAGCAATGTGAAAGTGGCTGTGCTGTTTTCCGGTGGGCTCGA
CTGCACATTGCTCGCCAGGCTCTCTCATGAGATCCTGCCAAAGGAGGAAG
TCATTGACTTGCTCAACGTGGCATTCGAAAACCCGCGCGTTGCGGCCGCC
GCGGCGGGCAAGGGAGGTGCCACTGGCTCCGTGTATGAAAGCTGCCCCGA
TCGTATAACCGGCCGGGCGGCATTTGCAGAGTTGCAAAGAGTTTGCCCCG
ACCGCAATTGGCGATTTGTTGCAGTCGATGTACCGTACGAGGAAACCCTT
GCGCATCGTGAGACTGTCAAGCGTCTGATGAGACCCCACAATACCGAGAT
GGATTTGTCCATCGCTTGCGCATTATATTTTGCTTCGCGTGGGCAAGGGC
TGGCATTCGACAGTCGACAGATCGACGCTCAACCCACGCAATATGCCACT
TCGGCACGGGTGCTCCTGTCTGGCCTTGGCGCAGATGAGCTATTTGCAGG
ATACTCGAGACATGGAGCAGCATTTTCTCGCGATGGATTCACGGGCCTCA
TTGACGAGATCAATCTTGACGTCAGCCGCCTTGGAAAGCGAAACCTGGGC
CGTGACAATCGAGTCATTGCACACTGGGGTCGCGAAGCGAGGTTTCCCTT
TCTAGACGAAGAGTTCGTGTCCTGGGTGGTGCAGCTCCCAGTCTGGGAGA
AATGCGGATTCGGCACCCCTTCACCACCAACGGATTCACCAGAGGCAGGG
CTCGATTCGGAGAAAAAGGCCCTTCGCCTGGTCGCACTGAGACTCGGCAT
GACGAACGTCGCCCGGGAGAAGAAGCGAGCAATCCAGTTTGGTTCCAGGA
CAGCCAAGATGGAGAAGAGCAAAGTGAAAGGGACCGATGCACTTACCTGA
ATGTGTGGTATTTTCTTTTCTCTAAGCGCATCAGGAGCTGTGCTCCCTAA
TGAGGAGACTTGCTGCTTGTTGCGGAAAAGAGGACCTGATAACTACCATG
TTCATAATGTTGAACAGAAGATAGCCAATACACGGTCAAGCAATGAAGAA
CCCACTGCTGTTCAGCTTACCTTTGTTTCCACAGTCTTGTCGATGAGAGG
AGGCTGCCTTGTTCCCCAGCCACTGGTGGATCTCACTACGCAGTCCGTGT
TATGCTACAATGGAGACGCCTGGAAGATATCAGGTGAACCTATCCAGGGC
AACGATGCGGAGCTGATCTTTAAGCTGTTACTGCAGGCTGTAAAGCACCA
TTCGAAAACAACTTCGTCAGCGGACTCGGGTACGACTGCTGTTCAAGGTG
TTCTGGATGTCATCAGTAGCATTTCCGGCCCCTTTGCCTTCGTGTTCTAT
GATGCGATCAACTCAAAACTGTTCTTCACCAGAGATTCACTTGGAAGACG
CTCTCTACTCCAAGGTGTTGATGAGTCAGGGGCCTTTAAGCTGTGCAGTC
TCTGCGACGGCACATCTTCGACCCTCTTTAGTGAGGTCGAGACAGACGGA
GTGTATATGATTGACTTTGAACATGCTATATTCCAGGATAACTGGATCGC
AACGAGGAGCGCTGGCGCGCCTTTGTTCGATGCAAGTTGCATACAGACAC
TTTCTTGGGAACATAACACATCCGATCTTCCTCTTCGTCCTAGAAACCCC
GTTCCTCCAATGAACAAATCCACACCCAATGGAGAAGCTCCTTCACTAAC
CGTTGAAACTGTCGCTGTCAGGGAACTTGAGCATAAGTTGCGTCAGTCCT
TAGCATTGCGAATCCAGAATGTACGAGAACCTCCGACTGCTTCATCAGGG
AGCAATGTGAAAGTGGCTGTGCTGTTTTCCGGTGGGCTCGACTGCACATT
GCTCGCCAGGCTCTCTCATGAGATCCTGCCAAAGGAGGAAGTCATTGACT
TGCTCAACGTGGCATTCGAAAACCCGCGCGTTGCGGCCGCCGCGGCGGGC
AAGGGAGGTGCCACTGGCTCCGTGTATGAAAGCTGCCCCGATCGTATAAC
CGGCCGGGCGGCATTTGCAGAGTTGCAAAGAGTTTGCCCCGACCGCAATT
GGCGATTTGTTGCAGTCGATGTACCGTACGAGGAAACCCTTGCGCATCGT
GAGACTGTCAAGCGTCTGATGAGACCCCACAATACCGAGATGGATTTGTC
CATCGCTTGCGCATTATATTTTGCTTCGCGTGGGCAAGGGCTGGCATTCG
ACAGTCGACAGATCGACGCTCAACCCACGCAATATGCCACTTCGGCACGG
GTGCTCCTGTCTGGCCTTGGCGCAGATGAGCTATTTGCAGGATACTCGAG
ACATGGAGCAGCATTTTCTCGCGATGGATTCACGGGCCTCATTGACGAGA
TCAATCTTGACGTCAGCCGCCTTGGAAAGCGAAACCTGGGCCGTGACAAT
CGAGTCATTGCACACTGGGGTCGCGAAGCGAGGTTTCCCTTTCTAGACGA
AGAGTTCGTGTCCTGGGTGGTGCAGCTCCCAGTCTGGGAGAAATGCGGAT
TCGGCACCCCTTCACCACCAACGGATTCACCAGAGGCAGGGCTCGATTCG
GAGAAAAAGGCCCTTCGCCTGGTCGCACTGAGACTCGGCATGACGAACGT
CGCCCGGGAGAAGAAGCGAGCAATCCAGTTTGGTTCCAGGACAGCCAAGA
TGGAGAAGAGCAAAGTGAAAGGGACCGATGCACTTACCTGAATGTGTGGT
ATTTTCTTTTCTCTAAGCGCATCAGGAGCTGTGCTCCCTAATGAGGAGAC
TTGCTGCTTGTTGCGGAAAAGAGGACCTGATAACTACCATGTTCATAATG
TTGAACAGAAGATAGCCAATACACGGTCAAGCAATGAAGAACCCACTGCT
GTTCAGCTTACCTTTGTTTCCACAGTCTTGTCGATGAGAGGAGGCTGCCT
TGTTCCCCAGCCACTGGTGGATCTCACTACGCAGTCCGTGTTATGCTACA
ATGGAGACGCCTGGAAGATATCAGGTGAACCTATCCAGGGCAACGATGCG
GAGCTGATCTTTAAGCTGTTACTGCAGGCTGTAAAGCACCATTCGAAAAC
AACTTCGTCAGCGGACTCGGGTACGACTGCTGTTCAAGGTGTTCTGGATG
TCATCAGTAGCATTTCCGGCCCCTTTGCCTTCGTGTTCTATGATGCGATC
AACTCAAAACTGTTCTTCACCAGAGATTCACTTGGAAGACGCTCTCTACT
CCAAGGTGTTGATGAGTCAGGGGCCTTTAAGCTGTGCAGTCTCTGCGACG
GCACATCTTCGACCCTCTTTAGTGAGGTCGAGACAGACGGAGTGTATATG
ATTGACTTTGAACATGCTATATTCCAGGATAACTGGATCGCAACGAGGAG
CGCTGGCGCGCCTTTGTTCGATGCAAGTTGCATACAGACACTTTCTTGGG
AACATAACACATCCGATCTTCCTCTTCGTCCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006529asparagine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004066asparagine synthase (glutamine-hydrolyzing) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010549KJC3_010549Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010549-T1KJC3_010549-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010549-T1.cdsKJC3_010549-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010549-T1.utr3p1KJC3_010549-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010549-T1.exon2KJC3_010549-T1.exon2Aspergillus niger KJC3exon
KJC3_010549-T1.exon1KJC3_010549-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010549-T1.utr5p1KJC3_010549-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001962
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR014729
DBxrefInterPro:IPR017932
DBxrefPFAM:PF13537
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3712568..3715126 -
Powered by Drupal