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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3745616..3747161- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010563-T1 ID=KJC3_010563-T1|Name=KJC3_010563-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1546bp|location=Sequence derived from alignment at ch7:3745616..3747161- (Aspergillus niger KJC3)
ATGTCTGATCGCGCCTCCTCGGCATCATTTCGAGCAGGACCTCCATCACC
ATCATCTCCCGCCGCAGGGACTCTCAAGCAAAACCAGTTACCAGCTCCCT
TATCCGATCGAATTCCACAGACTCCGACATCACCTCCGTTGATGTCGGTA
AGCGCTCAGAACTATGCCACCAACTTTGTATCCTCGCAAGCATCACCTAA
CCAGGCGACCTCTCAATCCGCAACCCTCTCATCACCCCCGTCCTCTGCTC
CGATGTCCACCCAAGCCTCGCAACAACCGACGGTAGGTACGGCGAATTCG
TTTCCGACGCCGGCCAGCAGCGTGAGCGGGCACTTCCCGGGTGCGACTTC
CTTCGATGATCCTGAAAATACAGATAAGCCAATGGGCTCGACAGTTCCAG
ACACAGGTGCGCAAACAGCGAACATGAATGCCGCGGCCATACAGCAGGCA
GAACACAGACGGACAGATCATGACCGGCATACAGAAGGTATAAAAATGGA
AGTTGGAGTCCGCGATTTTGCTGTGAACCACGGAGGCGACGCTATGGATA
TCGATAGTGAGGCGCCGGCTTCATCCAGTCGCAGTGAGCCAAGCTTGGAA
TCCTTGCAGAAGAACTTTTCGTCTGCCTTTCATGTTTGCAAAAGCTGTAA
GAGCTCCCCAGTCCTTGGCATGGCTGTTGCCACAATTTGCAATGCACTCT
CTCCCATCTTATATTTGGATTGAGCTTTGTTAACACACGTGGCTTTATGA
AAATGCAGCCCATATTGCGACTGGACCGGATCCATCGCTAGATCTCATCT
CACTGTACGGATTAGGTCCAGTGGCAAAGTCTGTTGCTCGGATGGATCCT
GTGACAGGCGAGAAGATCAACAGGCTCAGGAAATCCTATGAAGGAAAGCT
GAAGGGCTTGGGACTCGCAGGCAGGAACAAGCCAGTGAAGACCGAGCCTG
GTGCGCCCGGAAGCCTCAGGCACATGACCATGTGGCCAGAGGAAGAATGG
CAAAACCAAAAAGTGTTCGGGAAGGAGATCAAGGTAGCGGACATGGACTC
TGCGCTGCACAGCTTGCAGATGAGGGCCATGAAGATGGAGCCGGGCACGG
TACCGAACAATGAGTATTGGGAAGACGTGCTGGGGCACGAGAAGCCATCT
AAGCACGCCGGTGGCGACGCCAGCAAAAAGGGCGTCGCACCCCCTCCCAA
CGGAGTCCGGATTCCCCAACCGAATGGAACCCCAGCGCCTGTTTCAGACC
AAGAGCGATCCCGACCCAGCAGGGGACGTAAACGGCATTACGACGACAAC
AGTTTTGTTGGTTACGGCGAAGGTTACGCAGACGATGATGACGATGGGGC
ATTTTATTCAAACAGTGAATGCATGGGGAAGAAAAAACGGAAGAAGGTAG
GGCGTTCGGACGGTGAAATGGCATTCTAACATACTGATCACATTCGCTTA
TTTTTCGAAAAGGACCACGTTTCGAAGATATCTACCCCTCTACCTGACCG
AGGTGGAAGTTACGGGGTTGGTATGTTTGGGATCGGGGCCAGGTAA back to topCoding sequence (CDS) from alignment at ch7:3745616..3747161- >KJC3_010563-T1 ID=KJC3_010563-T1|Name=KJC3_010563-T1|organism=Aspergillus niger KJC3|type=CDS|length=4104bp|location=Sequence derived from alignment at ch7:3745616..3747161- (Aspergillus niger KJC3)
GACCACGTTTCGAAGATATCTACCCCTCTACCTGACCGAGGTGGAAGTTA
CGGGGTTGGTATGTTTGGGATCGGGGCCAGGTAACCCATATTGCGACTGG
ACCGGATCCATCGCTAGATCTCATCTCACTGTACGGATTAGGTCCAGTGG
CAAAGTCTGTTGCTCGGATGGATCCTGTGACAGGCGAGAAGATCAACAGG
CTCAGGAAATCCTATGAAGGAAAGCTGAAGGGCTTGGGACTCGCAGGCAG
GAACAAGCCAGTGAAGACCGAGCCTGGTGCGCCCGGAAGCCTCAGGCACA
TGACCATGTGGCCAGAGGAAGAATGGCAAAACCAAAAAGTGTTCGGGAAG
GAGATCAAGGTAGCGGACATGGACTCTGCGCTGCACAGCTTGCAGATGAG
GGCCATGAAGATGGAGCCGGGCACGGTACCGAACAATGAGTATTGGGAAG
ACGTGCTGGGGCACGAGAAGCCATCTAAGCACGCCGGTGGCGACGCCAGC
AAAAAGGGCGTCGCACCCCCTCCCAACGGAGTCCGGATTCCCCAACCGAA
TGGAACCCCAGCGCCTGTTTCAGACCAAGAGCGATCCCGACCCAGCAGGG
GACGTAAACGGCATTACGACGACAACAGTTTTGTTGGTTACGGCGAAGGT
TACGCAGACGATGATGACGATGGGGCATTTTATTCAAACAGTGAATGCAT
GGGGAAGAAAAAACGGAAGAAGATGTCTGATCGCGCCTCCTCGGCATCAT
TTCGAGCAGGACCTCCATCACCATCATCTCCCGCCGCAGGGACTCTCAAG
CAAAACCAGTTACCAGCTCCCTTATCCGATCGAATTCCACAGACTCCGAC
ATCACCTCCGTTGATGTCGGTAAGCGCTCAGAACTATGCCACCAACTTTG
TATCCTCGCAAGCATCACCTAACCAGGCGACCTCTCAATCCGCAACCCTC
TCATCACCCCCGTCCTCTGCTCCGATGTCCACCCAAGCCTCGCAACAACC
GACGGTAGGTACGGCGAATTCGTTTCCGACGCCGGCCAGCAGCGTGAGCG
GGCACTTCCCGGGTGCGACTTCCTTCGATGATCCTGAAAATACAGATAAG
CCAATGGGCTCGACAGTTCCAGACACAGGTGCGCAAACAGCGAACATGAA
TGCCGCGGCCATACAGCAGGCAGAACACAGACGGACAGATCATGACCGGC
ATACAGAAGGTATAAAAATGGAAGTTGGAGTCCGCGATTTTGCTGTGAAC
CACGGAGGCGACGCTATGGATATCGATAGTGAGGCGCCGGCTTCATCCAG
TCGCAGTGAGCCAAGCTTGGAATCCTTGCAGAAGAACTTTTCGTCTGCCT
TTCATGTTTGCAAAAGCTGACCACGTTTCGAAGATATCTACCCCTCTACC
TGACCGAGGTGGAAGTTACGGGGTTGGTATGTTTGGGATCGGGGCCAGGT
AACCCATATTGCGACTGGACCGGATCCATCGCTAGATCTCATCTCACTGT
ACGGATTAGGTCCAGTGGCAAAGTCTGTTGCTCGGATGGATCCTGTGACA
GGCGAGAAGATCAACAGGCTCAGGAAATCCTATGAAGGAAAGCTGAAGGG
CTTGGGACTCGCAGGCAGGAACAAGCCAGTGAAGACCGAGCCTGGTGCGC
CCGGAAGCCTCAGGCACATGACCATGTGGCCAGAGGAAGAATGGCAAAAC
CAAAAAGTGTTCGGGAAGGAGATCAAGGTAGCGGACATGGACTCTGCGCT
GCACAGCTTGCAGATGAGGGCCATGAAGATGGAGCCGGGCACGGTACCGA
ACAATGAGTATTGGGAAGACGTGCTGGGGCACGAGAAGCCATCTAAGCAC
GCCGGTGGCGACGCCAGCAAAAAGGGCGTCGCACCCCCTCCCAACGGAGT
CCGGATTCCCCAACCGAATGGAACCCCAGCGCCTGTTTCAGACCAAGAGC
GATCCCGACCCAGCAGGGGACGTAAACGGCATTACGACGACAACAGTTTT
GTTGGTTACGGCGAAGGTTACGCAGACGATGATGACGATGGGGCATTTTA
TTCAAACAGTGAATGCATGGGGAAGAAAAAACGGAAGAAGATGTCTGATC
GCGCCTCCTCGGCATCATTTCGAGCAGGACCTCCATCACCATCATCTCCC
GCCGCAGGGACTCTCAAGCAAAACCAGTTACCAGCTCCCTTATCCGATCG
AATTCCACAGACTCCGACATCACCTCCGTTGATGTCGGTAAGCGCTCAGA
ACTATGCCACCAACTTTGTATCCTCGCAAGCATCACCTAACCAGGCGACC
TCTCAATCCGCAACCCTCTCATCACCCCCGTCCTCTGCTCCGATGTCCAC
CCAAGCCTCGCAACAACCGACGGTAGGTACGGCGAATTCGTTTCCGACGC
CGGCCAGCAGCGTGAGCGGGCACTTCCCGGGTGCGACTTCCTTCGATGAT
CCTGAAAATACAGATAAGCCAATGGGCTCGACAGTTCCAGACACAGGTGC
GCAAACAGCGAACATGAATGCCGCGGCCATACAGCAGGCAGAACACAGAC
GGACAGATCATGACCGGCATACAGAAGGTATAAAAATGGAAGTTGGAGTC
CGCGATTTTGCTGTGAACCACGGAGGCGACGCTATGGATATCGATAGTGA
GGCGCCGGCTTCATCCAGTCGCAGTGAGCCAAGCTTGGAATCCTTGCAGA
AGAACTTTTCGTCTGCCTTTCATGTTTGCAAAAGCTGACCACGTTTCGAA
GATATCTACCCCTCTACCTGACCGAGGTGGAAGTTACGGGGTTGGTATGT
TTGGGATCGGGGCCAGGTAACCCATATTGCGACTGGACCGGATCCATCGC
TAGATCTCATCTCACTGTACGGATTAGGTCCAGTGGCAAAGTCTGTTGCT
CGGATGGATCCTGTGACAGGCGAGAAGATCAACAGGCTCAGGAAATCCTA
TGAAGGAAAGCTGAAGGGCTTGGGACTCGCAGGCAGGAACAAGCCAGTGA
AGACCGAGCCTGGTGCGCCCGGAAGCCTCAGGCACATGACCATGTGGCCA
GAGGAAGAATGGCAAAACCAAAAAGTGTTCGGGAAGGAGATCAAGGTAGC
GGACATGGACTCTGCGCTGCACAGCTTGCAGATGAGGGCCATGAAGATGG
AGCCGGGCACGGTACCGAACAATGAGTATTGGGAAGACGTGCTGGGGCAC
GAGAAGCCATCTAAGCACGCCGGTGGCGACGCCAGCAAAAAGGGCGTCGC
ACCCCCTCCCAACGGAGTCCGGATTCCCCAACCGAATGGAACCCCAGCGC
CTGTTTCAGACCAAGAGCGATCCCGACCCAGCAGGGGACGTAAACGGCAT
TACGACGACAACAGTTTTGTTGGTTACGGCGAAGGTTACGCAGACGATGA
TGACGATGGGGCATTTTATTCAAACAGTGAATGCATGGGGAAGAAAAAAC
GGAAGAAGATGTCTGATCGCGCCTCCTCGGCATCATTTCGAGCAGGACCT
CCATCACCATCATCTCCCGCCGCAGGGACTCTCAAGCAAAACCAGTTACC
AGCTCCCTTATCCGATCGAATTCCACAGACTCCGACATCACCTCCGTTGA
TGTCGGTAAGCGCTCAGAACTATGCCACCAACTTTGTATCCTCGCAAGCA
TCACCTAACCAGGCGACCTCTCAATCCGCAACCCTCTCATCACCCCCGTC
CTCTGCTCCGATGTCCACCCAAGCCTCGCAACAACCGACGGTAGGTACGG
CGAATTCGTTTCCGACGCCGGCCAGCAGCGTGAGCGGGCACTTCCCGGGT
GCGACTTCCTTCGATGATCCTGAAAATACAGATAAGCCAATGGGCTCGAC
AGTTCCAGACACAGGTGCGCAAACAGCGAACATGAATGCCGCGGCCATAC
AGCAGGCAGAACACAGACGGACAGATCATGACCGGCATACAGAAGGTATA
AAAATGGAAGTTGGAGTCCGCGATTTTGCTGTGAACCACGGAGGCGACGC
TATGGATATCGATAGTGAGGCGCCGGCTTCATCCAGTCGCAGTGAGCCAA
GCTTGGAATCCTTGCAGAAGAACTTTTCGTCTGCCTTTCATGTTTGCAAA
AGCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013942 |
| DBxref | PFAM:PF08633 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3745616..3747161 - |
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