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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3754522..3757400+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010565-T1 ID=KJC3_010565-T1|Name=KJC3_010565-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2879bp|location=Sequence derived from alignment at ch7:3754522..3757400+ (Aspergillus niger KJC3)
GAACCACGTCTTGAGTCTCTCTTTCTACAAATACACTTGCGCTTCTCGTC
CCCTCTCCTTTCTTTCGAGGGTAAGTGCCTATCACGACCTGTCCGTCTGA
AGCTGTCATGAGTTTAACAGGGTGGTCGACAGGGCAAGACGCGAGCTTAT
AACTAGCATATCTTCTACTCAATAGCGTTCCATCTCTAGTACAACATAGA
GATTATGTATAATTAGCATGTCGGCTACTTCATTTCTGGACAAACCACTC
CTCAAAGTCAGTCGACCAGTGGCTGCTTGCTCAAGATGCCGAACAGCCAA
AATCAAATGTGACGGGAAGCTTCCGGCCTGCTCCGCGTGCGAAAGGGTCG
GGAAAGCGAGCACCTGCTCCGGCGCAAGTGACGAATTCGCCAGAGGAAAG
GAAAGAAGCTATGTCGCCTCTTTGGAAGGTTACTGCGAACGACTCAAAAC
GAAGATTGACGATCTTCGCCGCCTCAAAACATCATTATCAGTGGACGAAA
GGGGTGTCGCCCATCAAAGTTCGATCACCTCCATCTCCTCGGCAGGTACT
GTTGCACAGGAAGGTGGCAAAGAAGTGACTGACATCGATGACCTCGTTGG
TGATTTTGGCTTCTTGTAAGTTCTCGCTGAAATTAGCACGATGTTCCTCG
GACTGACACCAATCAGGTCCGTCAATGCGACTTCGAGAGACTTCCATGGG
ATTACTTCGAATACGTCTTTCGCCAATCTTCTTCTGTCCCTGTCTCAAGC
TGAGTCGATACCAAGAACGACGGCGCAGTCAATACCGCCACGCCATGAGA
TAATGCCCGTGCTACAACACTATTTCGACAACATCTACATACAGCTTCCA
TTTTTCGCCGAAACGAGCTTCTGGACATCTGTGGATGCGGTCTACCAAGC
TGGGGGGCGCTTTGCCAAGCCCTTTGACAAGTGGATTGTGCATATGGTCT
TAGCCACTGCGTCTGCGTCTATCTCCCTCGAGATCGGTGATAGAAGTCAT
CACAGAGCGTTGTCTCATGTTTCAATGGCAATGAATCAAGCCGAGGACGT
CGTCCGTCCCGGTACTATAGCCGGTATCCAGTCAATCCTCCTGCTTGCCC
AATATTCCTTATTCGACCCCCAACACTTTCGCAGCTGGTACTTAGTAGGG
ATGGCTGTCAGGGTAATGGTCGATCTAGGCCTACACCAGGACCCGCCTTT
GGATGTTCAGTCAGCCTCGGAGCAGTTGGACCTGCGCCGCCGTGTTTTCC
ATTGTGTCTATTGCTTGGATAGGTGTGTTAAACTTCTTTTTGTCCCGGAT
ACATACTTGCTACTTGATACTTGAGCTAACGAAAGAAACTCCATTTCACT
TTTAAAGAGGAATAAGCACTGCCTTTGAAAGAACCTTCTCGTTCTCGGAC
GATTCCGTCGATGTTGCTTTGCCGTCTTCTGCCACGTCCCTAGGGGCTTC
ACTAACCGAAAAGAGCCATATATTTTTACGAAGCTCGGAGCCTGCGTGGC
ACATCGTCAGAATTCGCCAAATACTGTCGGAGGGTTACCAGAGAAGATAT
TTTCATGAACACGAGACTTCTCTTCAAGCTCCGGCCTCGACGTGGGCTCT
CTGCTCAAAAGCATACGAGTGGTTTGATAAAATCCCGAGTAATATACCAA
ACCACTTCCCCATCCTGTACCGATTGGAGCTATCATACGCGATAGTCGTG
ATTCTCTCTGCTGGCGACGAACAGACCACACTATGTGATTACAGCAAGAT
TGTTCTGTTCCATTGCTGCATGCGGTACATCAAAGAACTCTATGAGGTGC
TGAAGAACCCTGCCTGGCTGCCCCTGATGACCTTCCTGGATATTCAGAGG
ACGTATCAAGTTGGCCGACGATTCATACGAGATGTGACAGAAAACCAGGA
CCTTCTCTTGAACCCGTCGATACCCGCATTACCCTCAATTCCTCCGGAGA
CCCCGGAACAGCTGATTTTGAATGGTGAAGATTGTATGAGCTTCCACGCG
CGCGCCTCGGAATGTCTTTCTCAGATCAACAATCTCCTCCAATATGGTGC
AAGCAAGTGGGGAGCAACCAGCATACTTGGAGACTTCCAGCAAATGTGCG
AGCCCGCCCGGAGCCGTCTATTACATGCATCGAACCCATATCTGGCAGGT
TCTGGGGCCTATATGGCTGGCTACGCTTCATTGGTGCCTGCAGGAACAGG
ATACCTAGGCTTTGACATTGGATAATCTAGCCCTCGGCGAGGGCCAAGGC
AAGGGATGCCTGCATCATGAATCTTCAATAATGCCTTAGTTCATGCCCCT
GTGTTGTGGTAATATTGTATATGTTTTTTTTTTTCTGGTTTGCACATGTT
ATATGTGAGCGATGTGAAGTTGGATAACGATAATACTCGGAGAAAAAGTG
TCCTTACCTCGATGTGTATTGTATCTTGATTTCCTTTCTTCTTCTTTTCT
TACTCTGTGGAATGCCTCCAGAGATTGCATGTATTTGGATGACAGTCGTG
AGCAGGGAGAATTCCTGGGCAGGTCCTACGAGAGAGTCTCCCGGTTGCGG
CTAATGCTGCAAGGGCTGCGAGCAGCCACACCAGAAGGCCGATCGCGTCG
GGCCATGTGGGCTAGCATCTCTCCATTTCCCCCCAAAACCGATGAGCATT
CGAGAAATTGCACGGGAACATCAATCCTCCGTACTCGGTAAATGTAGGTC
GGGATTTGAACCTGAACGTAAGCGATGCTGGTGCCTTTTAGTGATCTACC
GGCCAATCGTTGGCCAAGAGTGTGGCTGGTCAAGATCGGAGCCAGTTGAC
CGCACCATAAGCTTGGGGTAGTACAACTAGCTAGTTAGTCACAATATACT
CCGCAATGGAGAGGAAAGGAAAGACTACA back to topCoding sequence (CDS) from alignment at ch7:3754522..3757400+ >KJC3_010565-T1 ID=KJC3_010565-T1|Name=KJC3_010565-T1|organism=Aspergillus niger KJC3|type=CDS|length=6795bp|location=Sequence derived from alignment at ch7:3754522..3757400+ (Aspergillus niger KJC3)
ATGTCGGCTACTTCATTTCTGGACAAACCACTCCTCAAAGTCAGTCGACC
AGTGGCTGCTTGCTCAAGATGCCGAACAGCCAAAATCAAATGTGACGGGA
AGCTTCCGGCCTGCTCCGCGTGCGAAAGGGTCGGGAAAGCGAGCACCTGC
TCCGGCGCAAGTGACGAATTCGCCAGAGGAAAGGAAAGAAGCTATGTCGC
CTCTTTGGAAGGTTACTGCGAACGACTCAAAACGAAGATTGACGATCTTC
GCCGCCTCAAAACATCATTATCAGTGGACGAAAGGGGTGTCGCCCATCAA
AGTTCGATCACCTCCATCTCCTCGGCAGGTACTGTTGCACAGGAAGGTGG
CAAAGAAGTGACTGACATCGATGACCTCGTTGGTGATTTTGGCTTCTTGT
CCGTCAATGCGACTTCGAGAGACTTCCATGGGATTACTTCGAATACGTCT
TTCGCCAATCTTCTTCTGTCCCTGTCTCAAGCTGAGTCGATACCAAGAAC
GACGGCGCAGTCAATACCGCCACGCCATGAGATAATGCCCGTGCTACAAC
ACTATTTCGACAACATCTACATACAGCTTCCATTTTTCGCCGAAACGAGC
TTCTGGACATCTGTGGATGCGGTCTACCAAGCTGGGGGGCGCTTTGCCAA
GCCCTTTGACAAGTGGATTGTGCATATGGTCTTAGCCACTGCGTCTGCGT
CTATCTCCCTCGAGATCGGTGATAGAAGTCATCACAGAGCGTTGTCTCAT
GTTTCAATGGCAATGAATCAAGCCGAGGACGTCGTCCGTCCCGGTACTAT
AGCCGGCCTACACCAGGACCCGCCTTTGGATGTTCAGTCAGCCTCGGAGC
AGTTGGACCTGCGCCGCCGTGTTTTCCATTGTGTCTATTGCTTGGATAGA
GGAATAAGCACTGCCTTTGAAAGAACCTTCTCGTTCTCGGACGATTCCGT
CGATGTTGCTTTGCCGTCTTCTGCCACGTCCCTAGGGGCTTCACTAACCG
AAAAGAGCCATATATTTTTACGAAGCTCGGAGCCTGCGTGGCACATCGTC
AGAATTCGCCAAATACTGTCGGAGGGTTACCAGAGAAGATATTTTCATGA
ACACGAGACTTCTCTTCAAGCTCCGGCCTCGACGTGGGCTCTCTGCTCAA
AAGCATACGAGTGGTTTGATAAAATCCCGAGTAATATACCAAACCACTTC
CCCATCCTGTACCGATTGGAGCTATCATACGCGATAGTCGTGATTCTCTC
TGCTGGCGACGAACAGACCACACTATGTGATTACAGCAAGATTGTTCTGT
TCCATTGCTGCATGCGGTACATCAAAGAACTCTATGAGAAAACCAGGACC
TTCTCTTGAATGTCGGCTACTTCATTTCTGGACAAACCACTCCTCAAAGT
CAGTCGACCAGTGGCTGCTTGCTCAAGATGCCGAACAGCCAAAATCAAAT
GTGACGGGAAGCTTCCGGCCTGCTCCGCGTGCGAAAGGGTCGGGAAAGCG
AGCACCTGCTCCGGCGCAAGTGACGAATTCGCCAGAGGAAAGGAAAGAAG
CTATGTCGCCTCTTTGGAAGGTTACTGCGAACGACTCAAAACGAAGATTG
ACGATCTTCGCCGCCTCAAAACATCATTATCAGTGGACGAAAGGGGTGTC
GCCCATCAAAGTTCGATCACCTCCATCTCCTCGGCAGGTACTGTTGCACA
GGAAGGTGGCAAAGAAGTGACTGACATCGATGACCTCGTTGGTGATTTTG
GCTTCTTGTCCGTCAATGCGACTTCGAGAGACTTCCATGGGATTACTTCG
AATACGTCTTTCGCCAATCTTCTTCTGTCCCTGTCTCAAGCTGAGTCGAT
ACCAAGAACGACGGCGCAGTCAATACCGCCACGCCATGAGATAATGCCCG
TGCTACAACACTATTTCGACAACATCTACATACAGCTTCCATTTTTCGCC
GAAACGAGCTTCTGGACATCTGTGGATGCGGTCTACCAAGCTGGGGGGCG
CTTTGCCAAGCCCTTTGACAAGTGGATTGTGCATATGGTCTTAGCCACTG
CGTCTGCGTCTATCTCCCTCGAGATCGGTGATAGAAGTCATCACAGAGCG
TTGTCTCATGTTTCAATGGCAATGAATCAAGCCGAGGACGTCGTCCGTCC
CGGTACTATAGCCGGCCTACACCAGGACCCGCCTTTGGATGTTCAGTCAG
CCTCGGAGCAGTTGGACCTGCGCCGCCGTGTTTTCCATTGTGTCTATTGC
TTGGATAGAGGAATAAGCACTGCCTTTGAAAGAACCTTCTCGTTCTCGGA
CGATTCCGTCGATGTTGCTTTGCCGTCTTCTGCCACGTCCCTAGGGGCTT
CACTAACCGAAAAGAGCCATATATTTTTACGAAGCTCGGAGCCTGCGTGG
CACATCGTCAGAATTCGCCAAATACTGTCGGAGGGTTACCAGAGAAGATA
TTTTCATGAACACGAGACTTCTCTTCAAGCTCCGGCCTCGACGTGGGCTC
TCTGCTCAAAAGCATACGAGTGGTTTGATAAAATCCCGAGTAATATACCA
AACCACTTCCCCATCCTGTACCGATTGGAGCTATCATACGCGATAGTCGT
GATTCTCTCTGCTGGCGACGAACAGACCACACTATGTGATTACAGCAAGA
TTGTTCTGTTCCATTGCTGCATGCGGTACATCAAAGAACTCTATGAGAAA
ACCAGGACCTTCTCTTGAATGTCGGCTACTTCATTTCTGGACAAACCACT
CCTCAAAGTCAGTCGACCAGTGGCTGCTTGCTCAAGATGCCGAACAGCCA
AAATCAAATGTGACGGGAAGCTTCCGGCCTGCTCCGCGTGCGAAAGGGTC
GGGAAAGCGAGCACCTGCTCCGGCGCAAGTGACGAATTCGCCAGAGGAAA
GGAAAGAAGCTATGTCGCCTCTTTGGAAGGTTACTGCGAACGACTCAAAA
CGAAGATTGACGATCTTCGCCGCCTCAAAACATCATTATCAGTGGACGAA
AGGGGTGTCGCCCATCAAAGTTCGATCACCTCCATCTCCTCGGCAGGTAC
TGTTGCACAGGAAGGTGGCAAAGAAGTGACTGACATCGATGACCTCGTTG
GTGATTTTGGCTTCTTGTCCGTCAATGCGACTTCGAGAGACTTCCATGGG
ATTACTTCGAATACGTCTTTCGCCAATCTTCTTCTGTCCCTGTCTCAAGC
TGAGTCGATACCAAGAACGACGGCGCAGTCAATACCGCCACGCCATGAGA
TAATGCCCGTGCTACAACACTATTTCGACAACATCTACATACAGCTTCCA
TTTTTCGCCGAAACGAGCTTCTGGACATCTGTGGATGCGGTCTACCAAGC
TGGGGGGCGCTTTGCCAAGCCCTTTGACAAGTGGATTGTGCATATGGTCT
TAGCCACTGCGTCTGCGTCTATCTCCCTCGAGATCGGTGATAGAAGTCAT
CACAGAGCGTTGTCTCATGTTTCAATGGCAATGAATCAAGCCGAGGACGT
CGTCCGTCCCGGTACTATAGCCGGCCTACACCAGGACCCGCCTTTGGATG
TTCAGTCAGCCTCGGAGCAGTTGGACCTGCGCCGCCGTGTTTTCCATTGT
GTCTATTGCTTGGATAGAGGAATAAGCACTGCCTTTGAAAGAACCTTCTC
GTTCTCGGACGATTCCGTCGATGTTGCTTTGCCGTCTTCTGCCACGTCCC
TAGGGGCTTCACTAACCGAAAAGAGCCATATATTTTTACGAAGCTCGGAG
CCTGCGTGGCACATCGTCAGAATTCGCCAAATACTGTCGGAGGGTTACCA
GAGAAGATATTTTCATGAACACGAGACTTCTCTTCAAGCTCCGGCCTCGA
CGTGGGCTCTCTGCTCAAAAGCATACGAGTGGTTTGATAAAATCCCGAGT
AATATACCAAACCACTTCCCCATCCTGTACCGATTGGAGCTATCATACGC
GATAGTCGTGATTCTCTCTGCTGGCGACGAACAGACCACACTATGTGATT
ACAGCAAGATTGTTCTGTTCCATTGCTGCATGCGGTACATCAAAGAACTC
TATGAGAAAACCAGGACCTTCTCTTGAATGTCGGCTACTTCATTTCTGGA
CAAACCACTCCTCAAAGTCAGTCGACCAGTGGCTGCTTGCTCAAGATGCC
GAACAGCCAAAATCAAATGTGACGGGAAGCTTCCGGCCTGCTCCGCGTGC
GAAAGGGTCGGGAAAGCGAGCACCTGCTCCGGCGCAAGTGACGAATTCGC
CAGAGGAAAGGAAAGAAGCTATGTCGCCTCTTTGGAAGGTTACTGCGAAC
GACTCAAAACGAAGATTGACGATCTTCGCCGCCTCAAAACATCATTATCA
GTGGACGAAAGGGGTGTCGCCCATCAAAGTTCGATCACCTCCATCTCCTC
GGCAGGTACTGTTGCACAGGAAGGTGGCAAAGAAGTGACTGACATCGATG
ACCTCGTTGGTGATTTTGGCTTCTTGTCCGTCAATGCGACTTCGAGAGAC
TTCCATGGGATTACTTCGAATACGTCTTTCGCCAATCTTCTTCTGTCCCT
GTCTCAAGCTGAGTCGATACCAAGAACGACGGCGCAGTCAATACCGCCAC
GCCATGAGATAATGCCCGTGCTACAACACTATTTCGACAACATCTACATA
CAGCTTCCATTTTTCGCCGAAACGAGCTTCTGGACATCTGTGGATGCGGT
CTACCAAGCTGGGGGGCGCTTTGCCAAGCCCTTTGACAAGTGGATTGTGC
ATATGGTCTTAGCCACTGCGTCTGCGTCTATCTCCCTCGAGATCGGTGAT
AGAAGTCATCACAGAGCGTTGTCTCATGTTTCAATGGCAATGAATCAAGC
CGAGGACGTCGTCCGTCCCGGTACTATAGCCGGCCTACACCAGGACCCGC
CTTTGGATGTTCAGTCAGCCTCGGAGCAGTTGGACCTGCGCCGCCGTGTT
TTCCATTGTGTCTATTGCTTGGATAGAGGAATAAGCACTGCCTTTGAAAG
AACCTTCTCGTTCTCGGACGATTCCGTCGATGTTGCTTTGCCGTCTTCTG
CCACGTCCCTAGGGGCTTCACTAACCGAAAAGAGCCATATATTTTTACGA
AGCTCGGAGCCTGCGTGGCACATCGTCAGAATTCGCCAAATACTGTCGGA
GGGTTACCAGAGAAGATATTTTCATGAACACGAGACTTCTCTTCAAGCTC
CGGCCTCGACGTGGGCTCTCTGCTCAAAAGCATACGAGTGGTTTGATAAA
ATCCCGAGTAATATACCAAACCACTTCCCCATCCTGTACCGATTGGAGCT
ATCATACGCGATAGTCGTGATTCTCTCTGCTGGCGACGAACAGACCACAC
TATGTGATTACAGCAAGATTGTTCTGTTCCATTGCTGCATGCGGTACATC
AAAGAACTCTATGAGAAAACCAGGACCTTCTCTTGAATGTCGGCTACTTC
ATTTCTGGACAAACCACTCCTCAAAGTCAGTCGACCAGTGGCTGCTTGCT
CAAGATGCCGAACAGCCAAAATCAAATGTGACGGGAAGCTTCCGGCCTGC
TCCGCGTGCGAAAGGGTCGGGAAAGCGAGCACCTGCTCCGGCGCAAGTGA
CGAATTCGCCAGAGGAAAGGAAAGAAGCTATGTCGCCTCTTTGGAAGGTT
ACTGCGAACGACTCAAAACGAAGATTGACGATCTTCGCCGCCTCAAAACA
TCATTATCAGTGGACGAAAGGGGTGTCGCCCATCAAAGTTCGATCACCTC
CATCTCCTCGGCAGGTACTGTTGCACAGGAAGGTGGCAAAGAAGTGACTG
ACATCGATGACCTCGTTGGTGATTTTGGCTTCTTGTCCGTCAATGCGACT
TCGAGAGACTTCCATGGGATTACTTCGAATACGTCTTTCGCCAATCTTCT
TCTGTCCCTGTCTCAAGCTGAGTCGATACCAAGAACGACGGCGCAGTCAA
TACCGCCACGCCATGAGATAATGCCCGTGCTACAACACTATTTCGACAAC
ATCTACATACAGCTTCCATTTTTCGCCGAAACGAGCTTCTGGACATCTGT
GGATGCGGTCTACCAAGCTGGGGGGCGCTTTGCCAAGCCCTTTGACAAGT
GGATTGTGCATATGGTCTTAGCCACTGCGTCTGCGTCTATCTCCCTCGAG
ATCGGTGATAGAAGTCATCACAGAGCGTTGTCTCATGTTTCAATGGCAAT
GAATCAAGCCGAGGACGTCGTCCGTCCCGGTACTATAGCCGGCCTACACC
AGGACCCGCCTTTGGATGTTCAGTCAGCCTCGGAGCAGTTGGACCTGCGC
CGCCGTGTTTTCCATTGTGTCTATTGCTTGGATAGAGGAATAAGCACTGC
CTTTGAAAGAACCTTCTCGTTCTCGGACGATTCCGTCGATGTTGCTTTGC
CGTCTTCTGCCACGTCCCTAGGGGCTTCACTAACCGAAAAGAGCCATATA
TTTTTACGAAGCTCGGAGCCTGCGTGGCACATCGTCAGAATTCGCCAAAT
ACTGTCGGAGGGTTACCAGAGAAGATATTTTCATGAACACGAGACTTCTC
TTCAAGCTCCGGCCTCGACGTGGGCTCTCTGCTCAAAAGCATACGAGTGG
TTTGATAAAATCCCGAGTAATATACCAAACCACTTCCCCATCCTGTACCG
ATTGGAGCTATCATACGCGATAGTCGTGATTCTCTCTGCTGGCGACGAAC
AGACCACACTATGTGATTACAGCAAGATTGTTCTGTTCCATTGCTGCATG
CGGTACATCAAAGAACTCTATGAGAAAACCAGGACCTTCTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010565-T1.utr3p1 | KJC3_010565-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3754522..3757400 + |
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