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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3773571..3776208- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010571-T1 ID=KJC3_010571-T1|Name=KJC3_010571-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2638bp|location=Sequence derived from alignment at ch7:3773571..3776208- (Aspergillus niger KJC3)
TGTAACCTTGCTCTTATAGTTACGAGAATTGAAACCAGGAGGAATTCATC
CGCGCTTTACACAAAAGCAATCATCATCATCATCATCGGCTCGCAAAGAA
AAAGGTTTACCCCTTGGCGAGTGTCAAAAGATCGGCCGCGAGTGGAGCGA
AGTCATTTCGGGGAAACATTAATGCGAAGAACCATTGCTGGAAAAGAGTG
GGGACTCAGGCACCTCCCTCAGGCATCACGAATCACGAACTGGTTGGCCT
CCAAACTAGTCTTTTCGCCCGTCGCTGCGTGTCTGCGGGCTGGCCATCCA
CACCCTTTCCCTCGCTTTTACCCTTGGCTTCGTCAATCTCTTTTCCCCTC
CTTCTCTTCTTCTTCTTCTGGCTCTTGCTCTTGCTGCTGCCTGTGAATCC
ACTTCCCGAGCCTCTCCTGGATGGCTTGTGTCGCAACTTCCTGACCTCTC
CTGCAGTCGGTCGGCTGTTTTGTTTACTGCCTCGGATTACCTTACGACCC
TCTGCAGGGCCTCCTGGCTTGCACATAAGCCTCAATTCGTCCCCGTATCG
CTGCAATCTCATGCCCGAGTGCTGAACTCCAACTGTTTGACCGTCCTTCT
TTTTTTATCGTCTCGTCTCGCCAGCCTTTTCCTCGATCAGCTACAGACAA
AACACGCGCCGGATCCCTTCCCAATTGCTCTTTCGACTCCTTTGTCCACC
CCCGTTCCTAACTCAAATCCGACGTTCGCTCGTTCCCCTTTTTGGCCCCT
CATCGCGGCGCAACTCCTTCGAGCTTGACTCAGAAAGAGAGAGAGAAAAA
AAAAACATCCAACACCTACCCTTCAGCAAGAGAGATTCCCAACACTCGTT
CCACCATGGCGTCGCCGTCTCTTTCCAGCTTGGAGCAGCGCAATCGCCTC
CCCACGCTCTTCGAAGTCCTCAGTCGCCGGACCCTCGCTCCCGTCGACCT
GTTTTCCTTCTATATCTATATGCGGGACCAGCAGCGCTCGGTGGATTATC
TGGACTTCTGGTATGTCTGGGAAACAATGTGTTACTTGCTGTTGGGCTAT
TAATAACCCATGTCTCTTAGGCTCGATGTCTCGCAACACATGTCCCTCTG
TCGTCATTACGTTCGGGAACTACGTCGGTCCGTTTTGGTAGCTACGCCTG
ATCTTGAGAAGGCCGACAGCAAAGGCTCTTCCGGCGCATTGGATAATATC
GAGCATTACAATGACATCCCGCTTGTGGAAGCAGGACCGTCCAACTCGCG
CCATGGATTAAACGATGTGGGCGACCGGGATGCTGACCAGAGACTGTCGG
CGTTTCTCCGCTCTGAAGGTCAAACATCCGGACACTCGCCTCAAAGCAGT
CTTGGTTCGCAGAATGTTGCTCGCGTCACCTCGAATGAGCAGCCGCCTCG
GGACAGTTCTGGAACACGGAATGACTCGCCTTCTCCAGGCCACACGGTGG
CACGTGCCGATATTCGCGCCAGCGCAGAGAAGATTCTGTATACGTACCTG
CTTCCGGGAGCAGAGAGAGAAATCGTTCTGCCCGAGGAGATGGTATCCGG
CATCATCAATCTGATCGAGGACGACGGCAGAGATGATCCTGAAGTATTTG
ATCCGGCGAAAGACTATGTTTTTCAGGCAATGGAGCGCGACGCTTTTCCA
GGGTTCTTGCAGGCCAAAGCTTTGGGAAATCTAGTCCCCTTGACGATCCT
CGCACGACTGGCGTTTGCCCTTATCAGCTTCGGTGGAGGCTTCTGGGGCG
CATTCTACGTGGTTCTCCGGGACAAACCCCGGCATATCCGTTGCTGGGTA
AGTAGCCGATCCTCGTTCGCAGGCCTGATATTTTACTAACATCTGACCAG
TTGATCTTGCCTTTTGCCATTGCCTCTTACTTCATCGTCTCGTACCAGTA
CAAGATTGACCCGGTCATGGCTTTCCTCGGTTACAGCGAGTACACGTTCA
TGAATTGGTCGCCGATTCGCGAGCCATACGTGCGCAAACTACTGAACAAG
CGGGCCACTGCCACTGCCATGATCGCCTTCTTTGTTGCCGCAGCGTTGAG
TATACTGTTCATCTTTGTGCCCGGTACTATGCTCTAATCTCCGTAATATT
GCGTATACCCCTGCCGATTTCAATTCGAAATCTGTTTCAATTTCTACGGC
CGCGTGATACCGCTTTTGGGCAGCATATATGTGCATCTTGATTCTTTCTG
AGCGTTAGCCAGCGTATCTTGCTTCTTGGGTCCAATTCAGCGTATGGATA
TAAAGAGAGCTTTTGCCTCCCCGAATGGCCTCGGGGATTCTCTTAATGTG
AGAAGGGGCAGATACCCAGTGCTTGGAGCTCCAGAGATGGCTGCTGTAGA
GCACCCATGCCCCTGGTCCCATAGCAAGTGGGATTTACATCTGCCAACCA
ACTATCCATGGACTGGCGTGACACACCAGGTCCGTCGGGTCACGACGTTC
ATTTCACACACCCTACACCTTGTGTATATTGGGTTTCCTTTCATTGTTTA
TTTACCTTTCTTACATAATACCCCTCATCTGCTGGATTTGCATGTACGTT
AAACGATTTCTCTGAGGCTTTGGTGTTGTGGATAGTCCACGGTAATTAGA
TTCTATTATGATATACTGATGCCATATATATGTCTGAC back to topCoding sequence (CDS) from alignment at ch7:3773571..3776208- >KJC3_010571-T1 ID=KJC3_010571-T1|Name=KJC3_010571-T1|organism=Aspergillus niger KJC3|type=CDS|length=3357bp|location=Sequence derived from alignment at ch7:3773571..3776208- (Aspergillus niger KJC3)
TTGATCTTGCCTTTTGCCATTGCCTCTTACTTCATCGTCTCGTACCAGTA
CAAGATTGACCCGGTCATGGCTTTCCTCGGTTACAGCGAGTACACGTTCA
TGAATTGGTCGCCGATTCGCGAGCCATACGTGCGCAAACTACTGAACAAG
CGGGCCACTGCCACTGCCATGATCGCCTTCTTTGTTGCCGCAGCGTTGAG
TATACTGTTCATCTTTGTGCCCGGTACTATGCTCTAAGCTCGATGTCTCG
CAACACATGTCCCTCTGTCGTCATTACGTTCGGGAACTACGTCGGTCCGT
TTTGGTAGCTACGCCTGATCTTGAGAAGGCCGACAGCAAAGGCTCTTCCG
GCGCATTGGATAATATCGAGCATTACAATGACATCCCGCTTGTGGAAGCA
GGACCGTCCAACTCGCGCCATGGATTAAACGATGTGGGCGACCGGGATGC
TGACCAGAGACTGTCGGCGTTTCTCCGCTCTGAAGGTCAAACATCCGGAC
ACTCGCCTCAAAGCAGTCTTGGTTCGCAGAATGTTGCTCGCGTCACCTCG
AATGAGCAGCCGCCTCGGGACAGTTCTGGAACACGGAATGACTCGCCTTC
TCCAGGCCACACGGTGGCACGTGCCGATATTCGCGCCAGCGCAGAGAAGA
TTCTGTATACGTACCTGCTTCCGGGAGCAGAGAGAGAAATCGTTCTGCCC
GAGGAGATGGTATCCGGCATCATCAATCTGATCGAGGACGACGGCAGAGA
TGATCCTGAAGTATTTGATCCGGCGAAAGACTATGTTTTTCAGGCAATGG
AGCGCGACGCTTTTCCAGGGTTCTTGCAGGCCAAAGCTTTGGGAAATCTA
GTCCCCTTGACGATCCTCGCACGACTGGCGTTTGCCCTTATCAGCTTCGG
TGGAGGCTTCTGGGGCGCATTCTACGTGGTTCTCCGGGACAAACCCCGGC
ATATCCGTTGCTGGATGGCGTCGCCGTCTCTTTCCAGCTTGGAGCAGCGC
AATCGCCTCCCCACGCTCTTCGAAGTCCTCAGTCGCCGGACCCTCGCTCC
CGTCGACCTGTTTTCCTTCTATATCTATATGCGGGACCAGCAGCGCTCGG
TGGATTATCTGGACTTCTGTTGATCTTGCCTTTTGCCATTGCCTCTTACT
TCATCGTCTCGTACCAGTACAAGATTGACCCGGTCATGGCTTTCCTCGGT
TACAGCGAGTACACGTTCATGAATTGGTCGCCGATTCGCGAGCCATACGT
GCGCAAACTACTGAACAAGCGGGCCACTGCCACTGCCATGATCGCCTTCT
TTGTTGCCGCAGCGTTGAGTATACTGTTCATCTTTGTGCCCGGTACTATG
CTCTAAGCTCGATGTCTCGCAACACATGTCCCTCTGTCGTCATTACGTTC
GGGAACTACGTCGGTCCGTTTTGGTAGCTACGCCTGATCTTGAGAAGGCC
GACAGCAAAGGCTCTTCCGGCGCATTGGATAATATCGAGCATTACAATGA
CATCCCGCTTGTGGAAGCAGGACCGTCCAACTCGCGCCATGGATTAAACG
ATGTGGGCGACCGGGATGCTGACCAGAGACTGTCGGCGTTTCTCCGCTCT
GAAGGTCAAACATCCGGACACTCGCCTCAAAGCAGTCTTGGTTCGCAGAA
TGTTGCTCGCGTCACCTCGAATGAGCAGCCGCCTCGGGACAGTTCTGGAA
CACGGAATGACTCGCCTTCTCCAGGCCACACGGTGGCACGTGCCGATATT
CGCGCCAGCGCAGAGAAGATTCTGTATACGTACCTGCTTCCGGGAGCAGA
GAGAGAAATCGTTCTGCCCGAGGAGATGGTATCCGGCATCATCAATCTGA
TCGAGGACGACGGCAGAGATGATCCTGAAGTATTTGATCCGGCGAAAGAC
TATGTTTTTCAGGCAATGGAGCGCGACGCTTTTCCAGGGTTCTTGCAGGC
CAAAGCTTTGGGAAATCTAGTCCCCTTGACGATCCTCGCACGACTGGCGT
TTGCCCTTATCAGCTTCGGTGGAGGCTTCTGGGGCGCATTCTACGTGGTT
CTCCGGGACAAACCCCGGCATATCCGTTGCTGGATGGCGTCGCCGTCTCT
TTCCAGCTTGGAGCAGCGCAATCGCCTCCCCACGCTCTTCGAAGTCCTCA
GTCGCCGGACCCTCGCTCCCGTCGACCTGTTTTCCTTCTATATCTATATG
CGGGACCAGCAGCGCTCGGTGGATTATCTGGACTTCTGTTGATCTTGCCT
TTTGCCATTGCCTCTTACTTCATCGTCTCGTACCAGTACAAGATTGACCC
GGTCATGGCTTTCCTCGGTTACAGCGAGTACACGTTCATGAATTGGTCGC
CGATTCGCGAGCCATACGTGCGCAAACTACTGAACAAGCGGGCCACTGCC
ACTGCCATGATCGCCTTCTTTGTTGCCGCAGCGTTGAGTATACTGTTCAT
CTTTGTGCCCGGTACTATGCTCTAAGCTCGATGTCTCGCAACACATGTCC
CTCTGTCGTCATTACGTTCGGGAACTACGTCGGTCCGTTTTGGTAGCTAC
GCCTGATCTTGAGAAGGCCGACAGCAAAGGCTCTTCCGGCGCATTGGATA
ATATCGAGCATTACAATGACATCCCGCTTGTGGAAGCAGGACCGTCCAAC
TCGCGCCATGGATTAAACGATGTGGGCGACCGGGATGCTGACCAGAGACT
GTCGGCGTTTCTCCGCTCTGAAGGTCAAACATCCGGACACTCGCCTCAAA
GCAGTCTTGGTTCGCAGAATGTTGCTCGCGTCACCTCGAATGAGCAGCCG
CCTCGGGACAGTTCTGGAACACGGAATGACTCGCCTTCTCCAGGCCACAC
GGTGGCACGTGCCGATATTCGCGCCAGCGCAGAGAAGATTCTGTATACGT
ACCTGCTTCCGGGAGCAGAGAGAGAAATCGTTCTGCCCGAGGAGATGGTA
TCCGGCATCATCAATCTGATCGAGGACGACGGCAGAGATGATCCTGAAGT
ATTTGATCCGGCGAAAGACTATGTTTTTCAGGCAATGGAGCGCGACGCTT
TTCCAGGGTTCTTGCAGGCCAAAGCTTTGGGAAATCTAGTCCCCTTGACG
ATCCTCGCACGACTGGCGTTTGCCCTTATCAGCTTCGGTGGAGGCTTCTG
GGGCGCATTCTACGTGGTTCTCCGGGACAAACCCCGGCATATCCGTTGCT
GGATGGCGTCGCCGTCTCTTTCCAGCTTGGAGCAGCGCAATCGCCTCCCC
ACGCTCTTCGAAGTCCTCAGTCGCCGGACCCTCGCTCCCGTCGACCTGTT
TTCCTTCTATATCTATATGCGGGACCAGCAGCGCTCGGTGGATTATCTGG
ACTTCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010571-T1.utr3p1 | KJC3_010571-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010571-T1.utr5p1 | KJC3_010571-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036305 |
| DBxref | InterPro:IPR016137 |
| DBxref | PFAM:PF00615 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3773571..3776208 - |
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