You are here

Home

KJC3_010572-T1, KJC3_010572-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010572-T1
Unique NameKJC3_010572-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3777486..3778235+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010572-T1 ID=KJC3_010572-T1|Name=KJC3_010572-T1|organism=Aspergillus niger KJC3|type=mRNA|length=750bp|location=Sequence derived from alignment at ch7:3777486..3778235+ (Aspergillus niger KJC3)
ATGACGACCTCCAAAGTCCTCGTTCTCATCACCGGCGCCAACCAAGGCAT
CGGCTTCGCCGCGGCACGGCAACTAGCTAGCTCAAGCAAGTTCCATGTGC
TAGTCGGCGCGCGCACGACACCCAAGGCCGAAGCTGCAATTAAGGAGCTG
TCATCGGATGCAGTGGACAAATCAGCTCTCACACCCATCACCATCGATGT
GACAGATGACGCATCTATCGCTGCAGCTGCCCAGACCGTATCGGAAACAT
TCGGACGTCTGGACATCCTGATCAACAATGCGGGCATTGCGCAGACACCT
GCTACTACCCTGCGCGAGCAATACCGGCAAGTTTTCGATGTCAACGTGTT
TGGCATCGTGGTTGTCATGGATACATTCCTCCCATTGCTGCGTGCGTCGA
CGTTTTCCGATCGCCGCATTGTCAATGTCACATCCGGACAGGGTCTGATC
AGCAGAGCCGGCCACAGGGATCACCCGGCTAACGCAAAGACCTATTTCAT
ACCTGACTACCGCAGTAGCAAAGCAGCGGTCAATATGATCACCGTCGCTC
ATGCGGTAAAGCTGGCTGAGGAGAAAATCACCGTCATTGCGGCTGCTCCG
GGCTATTGCCGCACCAATATCAACGGAGGCCAAGGGGTCAAGGAAGCAAG
CGACGGGGCCAGGGTCATTGTGCGCGCTGCCACCGAAGGAGACCCGGAGA
AACTGAGTGGGACGTTCGTCGCTGACGAACAATGGACCCTTGGTTGGTGA
back to top

Coding sequence (CDS) from alignment at ch7:3777486..3778235+

>KJC3_010572-T1 ID=KJC3_010572-T1|Name=KJC3_010572-T1|organism=Aspergillus niger KJC3|type=CDS|length=750bp|location=Sequence derived from alignment at ch7:3777486..3778235+ (Aspergillus niger KJC3)
ATGACGACCTCCAAAGTCCTCGTTCTCATCACCGGCGCCAACCAAGGCAT
CGGCTTCGCCGCGGCACGGCAACTAGCTAGCTCAAGCAAGTTCCATGTGC
TAGTCGGCGCGCGCACGACACCCAAGGCCGAAGCTGCAATTAAGGAGCTG
TCATCGGATGCAGTGGACAAATCAGCTCTCACACCCATCACCATCGATGT
GACAGATGACGCATCTATCGCTGCAGCTGCCCAGACCGTATCGGAAACAT
TCGGACGTCTGGACATCCTGATCAACAATGCGGGCATTGCGCAGACACCT
GCTACTACCCTGCGCGAGCAATACCGGCAAGTTTTCGATGTCAACGTGTT
TGGCATCGTGGTTGTCATGGATACATTCCTCCCATTGCTGCGTGCGTCGA
CGTTTTCCGATCGCCGCATTGTCAATGTCACATCCGGACAGGGTCTGATC
AGCAGAGCCGGCCACAGGGATCACCCGGCTAACGCAAAGACCTATTTCAT
ACCTGACTACCGCAGTAGCAAAGCAGCGGTCAATATGATCACCGTCGCTC
ATGCGGTAAAGCTGGCTGAGGAGAAAATCACCGTCATTGCGGCTGCTCCG
GGCTATTGCCGCACCAATATCAACGGAGGCCAAGGGGTCAAGGAAGCAAG
CGACGGGGCCAGGGTCATTGTGCGCGCTGCCACCGAAGGAGACCCGGAGA
AACTGAGTGGGACGTTCGTCGCTGACGAACAATGGACCCTTGGTTGGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010572KJC3_010572Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010572-T1.exon1KJC3_010572-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010572-T1.cdsKJC3_010572-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010572-T1KJC3_010572-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3777486..3778235 +
Powered by Drupal