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KJC3_010578-T1, KJC3_010578-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010578-T1
Unique NameKJC3_010578-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3788903..3791299+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010578-T1 ID=KJC3_010578-T1|Name=KJC3_010578-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2397bp|location=Sequence derived from alignment at ch7:3788903..3791299+ (Aspergillus niger KJC3)
AGCAAGAATACCCAACCTTGAAGCAATGAAGCATCGACTGGGATGCCCCC
TGCAGCAATCATACAGACATACCGACCTGTATCGTACAACCGTACCTGAG
GGTTTCCCGAGGCCGCAACAACCCACCAATCAGTATCCTGAAATGTGCGG
AAATCCCCGGGAAGCCCCATCGGCGGATTTGATTGGCAGCCGCAGTGGAT
CCCGCGTGTCGGTGCGATACCAATGACGATGTGGCCGGCCAAAAGTACAA
GAATTGACAGCTCTACTGGATTCACCACCGCGGTCATGTCCAGAAAAAGT
CCAAGAAACACTGCTCACTTACCCTCTCTTCCTTCTACCTCTATCCCCTC
CCAATTTCTTTCTGTATCATATCCTATATAGGGAACCTAAAGGAGTTTCT
CATCCCGGGAAGAGGCGTCCCCACCACCCCGGCGATCGATCGATTTGATC
CCCGCGCAGCCCAGCGATGGAACTCGAATTCCATCGAGGACGAAGAGTGG
CGCAGAACCAGATTCCGTCCCAGGCATACGGTCTCCGAGCCCCAGTGTCG
AACGCAAAACCACCGGGGCCCCAGTATAGCATGGACGCGCGGAGTATTCC
TCGCTCGATGAGCCGCGGTGCCGCTAATCTGCTCCAACTCTCCGCTTCTG
CTACCATCTCTTCTTCCACTGCTACTGCTGCTACCACTTCAACAACTCCT
GCCACTATCACAACCACAGTCCCTGCTCTTGCTTCCATACCTACAACTAC
TACAGCACCAGCAGGGACCAACAACCTCCAGCACCCCACCCCCGACATAG
GCCTTGCCGGCACCAACAATGACGGCTGGTCTGCACGGGTACTAGACGAA
CTAAAGGACCTGCTCCTTCTTCTCAGTCACGATGGGCAGGTTCTATACGC
GTCACCATCATGCTCTGAGGTGACAGGGATTGAATCGCACATGCTAGAAC
AAAGCGATTTCTCCCGTTTCGTCCATGAAGACGACAAGCCTATCCTAGGC
CACGAATTGGACGAGTGCATCAAGACTGGACGCGAAATACGATGTCACTT
CCGGCTCTGTAGGCCTGACAGTAGCTCCTGTTTATTAGAAGCACATGGAC
ATCCACACCTGATGACGACCGGAACTGCTCCTTCTGCGACCGCAGAATCA
TCCCAACAGCCGCAACGGAAGACAGTTTGTAAAGGGATATTTCTCGTCTG
TCGGCCATACCCAACACGGGGGTCACAGTTACTCGATTCGTTTTTGGAAC
ACAAAATTGAGAACATCCGGCTGAACCAGCGCATAGCCCAACTAAAGGGA
GAGGAAGAAGAGGAGTTGAATTCGAGACCAGGGCAGACGTCAACGACAAC
GACGACCAGCACCACTACCACGACAACAACGCGCCAGACGTATGTCTCAA
CGACACAGACCTCGTTTGCACAACGAGATACATCAGTATCTGGAGAGGAG
AATGAATCATCCGATACAGTCACCAATACGGACGACGCCGATTCACGATC
GTTTCTGGAGCAGGTTGGAGATCGGTTGCCGCAGACTGAAGACATGTCTC
ATATTGACGGGATTGAGGTCATGACGGGTTTGTACTACGGAGAAGGAGAA
CGTTCACAGGGATTGAGTACGGGAGTCCGTCATGGCCGTCTGATTCGTTG
TAATACGGAGCAGCCGAATGCCGTTGCTGCCGGTTCTGCTGCTACTGCCG
CTGCTCTGAGCGACCAACAACAGCAGCAGCAGCAGCAACCGTCGCAGGTG
CAACCGCAATCACAGCCCAAGAACCCTGCAGAGGCCGTCGACAGGAAGAA
AAGGATGAAAGGGGAGTATATGTGCACGGATTGCGGGACGTCGGATTCAC
CCGAGTGGAGGAAAGGCCCGGAAGGGCCGAAGACCCTGTGTAACGCTTGT
GGATGTGAGTTCTCCCCCTCCTTGATCATCTGACTATATAAATTCTGTAT
CAGTATTAACAGTGAAATGTGAACAGTACGTTGGGCCAAGAAAGAGAAAA
AACGCCAGGATTTAGGGCCGTAGTGAGGGAAAACGCAAAGAAAAGAAAAG
AAAGGGTGGGGCTTGCATTTGTATGAATTGTCATTTACTATCTACTGCTT
TGCTGCTGTTGCATTTGCCAGAAGGGGCCAATTTAGCCCTGCGAGGATAC
CCCTGCTTATGTACCTTTGTGCATCGTGCTTTTTTTTGTTCTCCTCGGTG
GCCCGCGAGGGGTCAGAACATTTTCTTAGCGGCTGCGCTGTCACAGCATT
TGCACTTCTTGGCCTACTACTATCACATTATGCCCCTTATCCTCTGAAGT
GAACAGATATCATGACTTTATGCCCGATTTACTTGAACTATACTTTTCTC
AGATTGCAACTTTAACACCGAATGAAACTAAAATGAACTCCACATGA
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Coding sequence (CDS) from alignment at ch7:3788903..3791299+

>KJC3_010578-T1 ID=KJC3_010578-T1|Name=KJC3_010578-T1|organism=Aspergillus niger KJC3|type=CDS|length=2970bp|location=Sequence derived from alignment at ch7:3788903..3791299+ (Aspergillus niger KJC3)
ATGGAACTCGAATTCCATCGAGGACGAAGAGTGGCGCAGAACCAGATTCC
GTCCCAGGCATACGGTCTCCGAGCCCCAGTGTCGAACGCAAAACCACCGG
GGCCCCAGTATAGCATGGACGCGCGGAGTATTCCTCGCTCGATGAGCCGC
GGTGCCGCTAATCTGCTCCAACTCTCCGCTTCTGCTACCATCTCTTCTTC
CACTGCTACTGCTGCTACCACTTCAACAACTCCTGCCACTATCACAACCA
CAGTCCCTGCTCTTGCTTCCATACCTACAACTACTACAGCACCAGCAGGG
ACCAACAACCTCCAGCACCCCACCCCCGACATAGGCCTTGCCGGCACCAA
CAATGACGGCTGGTCTGCACGGGTACTAGACGAACTAAAGGACCTGCTCC
TTCTTCTCAGTCACGATGGGCAGGTTCTATACGCGTCACCATCATGCTCT
GAGGTGACAGGGATTGAATCGCACATGCTAGAACAAAGCGATTTCTCCCG
TTTCGTCCATGAAGACGACAAGCCTATCCTAGGCCACGAATTGGACGAGT
GCATCAAGACTGGACGCGAAATACGATGTCACTTCCGGCTCTGTAGGCCT
GACAGTAGCTCCTGTTTATTAGAAGCACATGGACATCCACACCTGATGAC
GACCGGAACTGCTCCTTCTGCGACCGCAGAATCATCCCAACAGCCGCAAC
GGAAGACAGTTTGTAAAGGGATATTTCTCGTCTGTCGGCCATACCCAACA
CGGGGGTCACAGTTACTCGATTCGTTTTTGGAACACAAAATTGAGAACAT
CCGGCTGAACCAGCGCATAGCCCAACTAAAGGGAGAGGAAGAAGAGGAGT
TGAATTCGAGACCAGGGCAGACGTCAACGACAACGACGACCAGCACCACT
ACCACGACAACAACGCGCCAGACGTATGTCTCAACGACACAGACCTCGTT
TGCACAACGAGATACATCAGTATCTGGAGAGGAGAATGAATCATCCGATA
CAGTCACCAATACGGACGACGCCGATTCACGATCGTTTCTGGAGCAGGTT
GGAGATCGGTTGCCGCAGACTGAAGACATGTCTCATATTGACGGGATTGA
GGTCATGACGGGTTTGTACTACGGAGAAGGAGAACGTTCACAGGGATTGA
GTACGGGAGTCCGTCATGGCCGTCTGATTCGTTGTAATACGGAGCAGCCG
AATGCCGTTGCTGCCGGTTCTGCTGCTACTGCCGCTGCTCTGAGCGACCA
ACAACAGCAGCAGCAGCAGCAACCGTCGCAGGTGCAACCGCAATCACAGC
CCAAGAACCCTGCAGAGGCCGTCGACAGGAAGAAAAGGATGAAAGGGGAG
TATATGTGCACGGATTGCGGGACGTCGGATTCACCCGAGTGGAGGAAAGG
CCCGGAAGGGCCGAAGACCCTGTGTAACGCTTGTGGATTACGTTGGGCCA
AGAAAGAGAAAAAACGCCAGGATTTAGGGCCGTAGATGGAACTCGAATTC
CATCGAGGACGAAGAGTGGCGCAGAACCAGATTCCGTCCCAGGCATACGG
TCTCCGAGCCCCAGTGTCGAACGCAAAACCACCGGGGCCCCAGTATAGCA
TGGACGCGCGGAGTATTCCTCGCTCGATGAGCCGCGGTGCCGCTAATCTG
CTCCAACTCTCCGCTTCTGCTACCATCTCTTCTTCCACTGCTACTGCTGC
TACCACTTCAACAACTCCTGCCACTATCACAACCACAGTCCCTGCTCTTG
CTTCCATACCTACAACTACTACAGCACCAGCAGGGACCAACAACCTCCAG
CACCCCACCCCCGACATAGGCCTTGCCGGCACCAACAATGACGGCTGGTC
TGCACGGGTACTAGACGAACTAAAGGACCTGCTCCTTCTTCTCAGTCACG
ATGGGCAGGTTCTATACGCGTCACCATCATGCTCTGAGGTGACAGGGATT
GAATCGCACATGCTAGAACAAAGCGATTTCTCCCGTTTCGTCCATGAAGA
CGACAAGCCTATCCTAGGCCACGAATTGGACGAGTGCATCAAGACTGGAC
GCGAAATACGATGTCACTTCCGGCTCTGTAGGCCTGACAGTAGCTCCTGT
TTATTAGAAGCACATGGACATCCACACCTGATGACGACCGGAACTGCTCC
TTCTGCGACCGCAGAATCATCCCAACAGCCGCAACGGAAGACAGTTTGTA
AAGGGATATTTCTCGTCTGTCGGCCATACCCAACACGGGGGTCACAGTTA
CTCGATTCGTTTTTGGAACACAAAATTGAGAACATCCGGCTGAACCAGCG
CATAGCCCAACTAAAGGGAGAGGAAGAAGAGGAGTTGAATTCGAGACCAG
GGCAGACGTCAACGACAACGACGACCAGCACCACTACCACGACAACAACG
CGCCAGACGTATGTCTCAACGACACAGACCTCGTTTGCACAACGAGATAC
ATCAGTATCTGGAGAGGAGAATGAATCATCCGATACAGTCACCAATACGG
ACGACGCCGATTCACGATCGTTTCTGGAGCAGGTTGGAGATCGGTTGCCG
CAGACTGAAGACATGTCTCATATTGACGGGATTGAGGTCATGACGGGTTT
GTACTACGGAGAAGGAGAACGTTCACAGGGATTGAGTACGGGAGTCCGTC
ATGGCCGTCTGATTCGTTGTAATACGGAGCAGCCGAATGCCGTTGCTGCC
GGTTCTGCTGCTACTGCCGCTGCTCTGAGCGACCAACAACAGCAGCAGCA
GCAGCAACCGTCGCAGGTGCAACCGCAATCACAGCCCAAGAACCCTGCAG
AGGCCGTCGACAGGAAGAAAAGGATGAAAGGGGAGTATATGTGCACGGAT
TGCGGGACGTCGGATTCACCCGAGTGGAGGAAAGGCCCGGAAGGGCCGAA
GACCCTGTGTAACGCTTGTGGATTACGTTGGGCCAAGAAAGAGAAAAAAC
GCCAGGATTTAGGGCCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0043565sequence-specific DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010578KJC3_010578Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010578-T1.utr5p1KJC3_010578-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010578-T1.exon1KJC3_010578-T1.exon1Aspergillus niger KJC3exon
KJC3_010578-T1.exon2KJC3_010578-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010578-T1.cdsKJC3_010578-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010578-T1.utr3p1KJC3_010578-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010578-T1KJC3_010578-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035965
DBxrefInterPro:IPR013655
DBxrefInterPro:IPR013088
DBxrefInterPro:IPR000014
DBxrefInterPro:IPR000679
DBxrefPFAM:PF08447
DBxrefPFAM:PF00320
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3788903..3791299 +
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