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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3793238..3795097+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010580-T2 ID=KJC3_010580-T2|Name=KJC3_010580-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1860bp|location=Sequence derived from alignment at ch7:3793238..3795097+ (Aspergillus niger KJC3)
TCTAATCTTGTCTAATGCTAATTTTCTGACTATTCTGGGTCTAGCCGAAC
CGAGTATCTTCCCGGAGGTCTCCAAACGAAGTCCCGAATTTTTGATGCTC
GATCTTTTCGGCGCCGATACTTTCTCGGACACTTGAGGGCTTCACTCCCT
CCGAATCATCACACGCCATGGCTCGTCTACTGCAATCATTGCGTCGAGCC
CTAGGTTTAACCTCTTCGACTCCGGTCCCTCGCTATGCCCGCTCAATCGA
CACCAATTTCTCCGTCTTTCGGGGTATGTCACACACCTTAATTCGACTGA
ACGCCGTTCCCTCGTTCACGGTTGCGCGCCATCGCACACTAACAGATTAA
ATCCACCACTTAGAGGGAGATAGAGTTGTGGTTCATGGCAAGTCGCCGCT
CCTAAGCAAGCCTTTGCGGAAGGGTCACAAATCCGATACTCGTCGTGGAC
AATTGGAGCACGACAACATCATCGGCCGGAGGGTACGGGATCTGGTTCAG
GCGCGGAAAGGTCAGCATCTTCATCATTCTTCAATTAACCCAGCCGGGCG
CGCTCTAATTATCTCCGATAACTACAGGCCCTGAATATCGACTCTCCCTC
CCTACGCTCGAAGAATATGTTGCCATGACCCCCCGTCTCGTCACGCCGGT
ACGGACCTAACCACACCGTCAACGAGCACCACCACCCTCATTAACGCATG
CCAATAGATCTACTCAGCAGACGCCAACCTAATCGTCTCCCTCCTTGACA
TTCACATCGCACCCCCAGCCGAAGGAACAGACACACCGCCCCTTGAAATC
CTCGAATCCGGCACCGGCCACGGCTCCCTGACCCTTCACCTAGCGCGCGC
CATCCAAGGCGCCAACTCTACTCCTCCACCCCTCCCACCAAGCTCCCAAG
TCACATACCTGCCCACAAAACCCGGCGAGGTCTCGACCCGCAAGTTACAG
ACACCCGCAGATGGCGCCCCAACACCGACCGTCGACCCAGACCAGGAGAA
CTGGGACACCTGGCGCTCCCAACGCAAAGCAATCATCCACACCGTCGACG
TGACACCTAAATCCTCCGTCCACGCCGAAGGCATCGTTCGGGGTTTCCGT
CGCGGCATCTACGCAGGCAATGTGGACTTCTATGCCGGACACGTGGAGGA
TTGGATCGCAGAGCAGAAGAGACAACGCGCACCTACGGGCCTCCTTTCTT
CACTCACAAAAGATGATGTTGAGCCGTTCCTCTCCTACGCAATCCTGGAT
ATGCCCTCCGCGCATCTACGGATCCCCCACGTCGCCTCGATACTGAAGCG
GGACGGCATTCTAGCTGTATTCATGCCAAGCGTGACGCAGATCGGCGACT
GTGTGGAGCTTATTCGTCGACAGAGACTTCCTTTTGTTCAGGATAAGGTT
GTTGAGCTCGGAAACGGTATCAGCAGTGGTCGGTTGTGGGATATCCGGCA
CGCGGTGAAGAAGTCCCGTGACAGTGTGTCGGTGGCTTCCTCGTCCGCCG
AGGAGGGTTCGGAAGAGTCCGTCGAGACGAGTGCCGTTGAGACTGAGTCC
CTGGACGTCGCTGAAGAGAAGACGCCCAAGGAGGAAGACAGTGTGCTTGT
GTGCCGGCCAAAGGTTGGCTCGCGGATAGTGGGCGGTGGCTTTGTCGGAA
TCTGGAGAAAGATAGAAGAGGATGCGCGGAGACGCTGAGCTGAGCTGAGC
TTTGTTCAGTCACGCGTTTTATCTACCTACCTACCGTATTCTTGGATACC
CATTTGTACCATAACATGCATATCATAGAAGAAAGACCTACCTCATGTAC
TACTACTAAACATTCTTTTACTGTTCTATAACCATCCACCCATATACAAT
GAGATCAGAC back to topCoding sequence (CDS) from alignment at ch7:3793238..3795097+ >KJC3_010580-T2 ID=KJC3_010580-T2|Name=KJC3_010580-T2|organism=Aspergillus niger KJC3|type=CDS|length=2010bp|location=Sequence derived from alignment at ch7:3793238..3795097+ (Aspergillus niger KJC3)
ATGACCCCCCGTCTCGTCACGCCGATCTACTCAGCAGACGCCAACCTAAT
CGTCTCCCTCCTTGACATTCACATCGCACCCCCAGCCGAAGGAACAGACA
CACCGCCCCTTGAAATCCTCGAATCCGGCACCGGCCACGGCTCCCTGACC
CTTCACCTAGCGCGCGCCATCCAAGGCGCCAACTCTACTCCTCCACCCCT
CCCACCAAGCTCCCAAGTCACATACCTGCCCACAAAACCCGGCGAGGTCT
CGACCCGCAAGTTACAGACACCCGCAGATGGCGCCCCAACACCGACCGTC
GACCCAGACCAGGAGAACTGGGACACCTGGCGCTCCCAACGCAAAGCAAT
CATCCACACCGTCGACGTGACACCTAAATCCTCCGTCCACGCCGAAGGCA
TCGTTCGGGGTTTCCGTCGCGGCATCTACGCAGGCAATGTGGACTTCTAT
GCCGGACACGTGGAGGATTGGATCGCAGAGCAGAAGAGACAACGCGCACC
TACGGGCCTCCTTTCTTCACTCACAAAAGATGATGTTGAGCCGTTCCTCT
CCTACGCAATCCTGGATATGCCCTCCGCGCATCTACGGATCCCCCACGTC
GCCTCGATACTGAAGCGGGACGGCATTCTAGCTGTATTCATGCCAAGCGT
GACGCAGATCGGCGACTGTGTGGAGCTTATTCGTCGACAGAGACTTCCTT
TTGTTCAGGATAAGGTTGTTGAGCTCGGAAACGGTATCAGCAGTGGTCGG
TTGTGGGATATCCGGCACGCGGTGAAGAAGTCCCGTGACAGTGTGTCGGT
GGCTTCCTCGTCCGCCGAGGAGGGTTCGGAAGAGTCCGTCGAGACGAGTG
CCGTTGAGACTGAGTCCCTGGACGTCGCTGAAGAGAAGACGCCCAAGGAG
GAAGACAGTGTGCTTGTGTGCCGGCCAAAGGTTGGCTCGCGGATAGTGGG
CGGTGGCTTTGTCGGAATCTGGAGAAAGATAGAAGAGGATGCGCGGAGAC
GCTGAATGACCCCCCGTCTCGTCACGCCGATCTACTCAGCAGACGCCAAC
CTAATCGTCTCCCTCCTTGACATTCACATCGCACCCCCAGCCGAAGGAAC
AGACACACCGCCCCTTGAAATCCTCGAATCCGGCACCGGCCACGGCTCCC
TGACCCTTCACCTAGCGCGCGCCATCCAAGGCGCCAACTCTACTCCTCCA
CCCCTCCCACCAAGCTCCCAAGTCACATACCTGCCCACAAAACCCGGCGA
GGTCTCGACCCGCAAGTTACAGACACCCGCAGATGGCGCCCCAACACCGA
CCGTCGACCCAGACCAGGAGAACTGGGACACCTGGCGCTCCCAACGCAAA
GCAATCATCCACACCGTCGACGTGACACCTAAATCCTCCGTCCACGCCGA
AGGCATCGTTCGGGGTTTCCGTCGCGGCATCTACGCAGGCAATGTGGACT
TCTATGCCGGACACGTGGAGGATTGGATCGCAGAGCAGAAGAGACAACGC
GCACCTACGGGCCTCCTTTCTTCACTCACAAAAGATGATGTTGAGCCGTT
CCTCTCCTACGCAATCCTGGATATGCCCTCCGCGCATCTACGGATCCCCC
ACGTCGCCTCGATACTGAAGCGGGACGGCATTCTAGCTGTATTCATGCCA
AGCGTGACGCAGATCGGCGACTGTGTGGAGCTTATTCGTCGACAGAGACT
TCCTTTTGTTCAGGATAAGGTTGTTGAGCTCGGAAACGGTATCAGCAGTG
GTCGGTTGTGGGATATCCGGCACGCGGTGAAGAAGTCCCGTGACAGTGTG
TCGGTGGCTTCCTCGTCCGCCGAGGAGGGTTCGGAAGAGTCCGTCGAGAC
GAGTGCCGTTGAGACTGAGTCCCTGGACGTCGCTGAAGAGAAGACGCCCA
AGGAGGAAGACAGTGTGCTTGTGTGCCGGCCAAAGGTTGGCTCGCGGATA
GTGGGCGGTGGCTTTGTCGGAATCTGGAGAAAGATAGAAGAGGATGCGCG
GAGACGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0031515 | tRNA (m1A) methyltransferase complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030488 | tRNA methylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010580-T2.utr3p1 | KJC3_010580-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR014816 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3793238..3795097 + |
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