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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3831212..3833010+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010598-T1 ID=KJC3_010598-T1|Name=KJC3_010598-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1799bp|location=Sequence derived from alignment at ch7:3831212..3833010+ (Aspergillus niger KJC3)
CCCAGCCTGTCCTTGTCTCCAGTCGGCCATTATCTTGCTATTAGAAAAAG
CAATTGGCCATGTCTTTCAATAGGAAGTATGCTGGTCTTCCCGACCTGGT
ACGTTACATCTACCATACCTCCCTCCTGCCCCATCTTAATCAACCGACTA
CTAACATCGTTTGTTTGGGCCAGGATCTCGCTCCGGATATCTACGAGACC
CCCGATCTGACCGACGAAGCATCTACCGTTCCGGTTAGCTACCCCGCCTC
ACGCCTGCGTCTGCCTTTTCCAATGCTTCTAGCTGCTCATCCTTGACACT
ACACTCTATAGACTACAACTATCCGCACCGCATCCAACGTAGACGATGAC
GCCGGCTCCAACTCCGACATCGACCGGCAGGGGATCAATGCAGACGAGGC
ACGCGCCCACTTCTTAGGAGCCACGGTCGACGCGCGCGATGTCAACTTCT
CCGACAGTATCGCGATGAAGCGGAAGGCATACAAGAACAAGAACCGTCGC
CGGCGCAGAAATGAGAACGGTTCACAAGAGCCCGAAGACATCAGCGACAG
CGAAGAGGAAAGCCTAGAGAGGAAGCTCGCCCGCCTTCGCAGGGAAGTGG
AGGAACTGAAAGACGAGATGGCCGCTCGACAGACCGAAACCGAACCGGAA
GCCGCAGAAGGGAAGGAGCCCACGGACGACGGCGTCCTCGAATTGAGCCG
CGCCCTGGACAACCTCTATACCTCCCGCAGCGACAACACGGGGCCACACT
CCGCAGCTGCAATCCTAGCACAAAAGATTGCAACCAAATCCACATCCGAA
ACCGCTGCACTCAGCACCCAGAACGCAGGCGCCACACAACAACCCGAACC
CACAGCTCCGTCATCCTCGGGTGTCCTTGCCCACGCCGCAGCATTCGACG
GCCGCCTCGCCCTCATCGAAGCCGCCATGGGCATCTCCAGCTCCTCCAAC
CCCTTCGTCAGCGACGGCATCTCCGAACCCGCCCTCCAGCCCGTCCTCCC
AGCCGTCGACCACCTCACATCCCGCCTCACCACCCTCATGAACATCCTTG
TCGGCCCGAACCCCGTCTCCGCCGTGCCAACAATGGGCTCCGCACCCCCC
TCCACAACAGTCACCACCCCGCATCTCGAGACCCTCTCCACTCGAGTCCG
CAAACTCACCGCAGACACAGAAGCCCTCGCATCCGCGCGGAAACGTGCCG
TGGACGCCGCCAAGGCAGCTCAGAACGCGCGCATCGCTTCCGCCGCTATC
GAGCCCTCAGACATGTCCGTCTCGTCATCCTCCGCTACGGAAGTCGACCC
GGCTGCTACGCAGCGCGATGAACAAGCTACCAAGATCCAGGCCCTCTACG
CTACTCTCCCCACCATTCAGTCCCTCCATCCCATCCTTCCCAGCGTGCTG
GAGCGGCTTCGCTCCCTTCGCGCTATCCATGCGGGTGCTGCACAGGCTTC
GGAGTCACTCGATACGCTGGAGAAGAGACAGGCGGATATGGCAAGGGAGA
TTGAGCAGTGGCGCGAGGGTCTGCAGGTAGTCGAGGAGAAGATGGGCCAG
GGCGAAGCAGCGATGAAGAGTAATATCGAGCTTGTCGAACCTTGGGTTCG
GGATCTGGAGGCGCGGCTGGGTCGGTTGGAGGGGCAGGGCGCATGATTTG
GAAGATTGTGGATTAGTATGAACATATAACTACTAAACTTCTTGTAACTG
TAGCTGGTTGATAGTAGTACTGAGTACCCATATATCATTTGTCAAGCGAA
ATACCATCAGCAATTGCGATAGCAATCGAAATTCAATAGTATAGATACA back to topCoding sequence (CDS) from alignment at ch7:3831212..3833010+ >KJC3_010598-T1 ID=KJC3_010598-T1|Name=KJC3_010598-T1|organism=Aspergillus niger KJC3|type=CDS|length=4302bp|location=Sequence derived from alignment at ch7:3831212..3833010+ (Aspergillus niger KJC3)
ATGTCTTTCAATAGGAAGTATGCTGGTCTTCCCGACCTGGATCTCGCTCC
GGATATCTACGAGACCCCCGATCTGACCGACGAAGCATCTACCGTTCCGA
CTACAACTATCCGCACCGCATCCAACGTAGACGATGACGCCGGCTCCAAC
TCCGACATCGACCGGCAGGGGATCAATGCAGACGAGGCACGCGCCCACTT
CTTAGGAGCCACGGTCGACGCGCGCGATGTCAACTTCTCCGACAGTATCG
CGATGAAGCGGAAGGCATACAAGAACAAGAACCGTCGCCGGCGCAGAAAT
GAGAACGGTTCACAAGAGCCCGAAGACATCAGCGACAGCGAAGAGGAAAG
CCTAGAGAGGAAGCTCGCCCGCCTTCGCAGGGAAGTGGAGGAACTGAAAG
ACGAGATGGCCGCTCGACAGACCGAAACCGAACCGGAAGCCGCAGAAGGG
AAGGAGCCCACGGACGACGGCGTCCTCGAATTGAGCCGCGCCCTGGACAA
CCTCTATACCTCCCGCAGCGACAACACGGGGCCACACTCCGCAGCTGCAA
TCCTAGCACAAAAGATTGCAACCAAATCCACATCCGAAACCGCTGCACTC
AGCACCCAGAACGCAGGCGCCACACAACAACCCGAACCCACAGCTCCGTC
ATCCTCGGGTGTCCTTGCCCACGCCGCAGCATTCGACGGCCGCCTCGCCC
TCATCGAAGCCGCCATGGGCATCTCCAGCTCCTCCAACCCCTTCGTCAGC
GACGGCATCTCCGAACCCGCCCTCCAGCCCGTCCTCCCAGCCGTCGACCA
CCTCACATCCCGCCTCACCACCCTCATGAACATCCTTGTCGGCCCGAACC
CCGTCTCCGCCGTGCCAACAATGGGCTCCGCACCCCCCTCCACAACAGTC
ACCACCCCGCATCTCGAGACCCTCTCCACTCGAGTCCGCAAACTCACCGC
AGACACAGAAGCCCTCGCATCCGCGCGGAAACGTGCCGTGGACGCCGCCA
AGGCAGCTCAGAACGCGCGCATCGCTTCCGCCGCTATCGAGCCCTCAGAC
ATGTCCGTCTCGTCATCCTCCGCTACGGAAGTCGACCCGGCTGCTACGCA
GCGCGATGAACAAGCTACCAAGATCCAGGCCCTCTACGCTACTCTCCCCA
CCATTCAGTCCCTCCATCCCATCCTTCCCAGCGTGCTGGAGCGGCTTCGC
TCCCTTCGCGCTATCCATGCGGGTGCTGCACAGGCTTCGGAGTCACTCGA
TACGCTGGAGAAGAGACAGGCGGATATGGCAAGGGAGATTGAGCAGTGGC
GCGAGGGTCTGCAGGTAGTCGAGGAGAAGATGGGCCAGGGCGAAGCAGCG
ATGAAGAGTAATATCGAGCTTGTCGAACCTTGGGTTCGGGATCTGGAGGC
GCGGCTGGGTCGGTTGGAGGGGCAGGGCGCATGAATGTCTTTCAATAGGA
AGTATGCTGGTCTTCCCGACCTGGATCTCGCTCCGGATATCTACGAGACC
CCCGATCTGACCGACGAAGCATCTACCGTTCCGACTACAACTATCCGCAC
CGCATCCAACGTAGACGATGACGCCGGCTCCAACTCCGACATCGACCGGC
AGGGGATCAATGCAGACGAGGCACGCGCCCACTTCTTAGGAGCCACGGTC
GACGCGCGCGATGTCAACTTCTCCGACAGTATCGCGATGAAGCGGAAGGC
ATACAAGAACAAGAACCGTCGCCGGCGCAGAAATGAGAACGGTTCACAAG
AGCCCGAAGACATCAGCGACAGCGAAGAGGAAAGCCTAGAGAGGAAGCTC
GCCCGCCTTCGCAGGGAAGTGGAGGAACTGAAAGACGAGATGGCCGCTCG
ACAGACCGAAACCGAACCGGAAGCCGCAGAAGGGAAGGAGCCCACGGACG
ACGGCGTCCTCGAATTGAGCCGCGCCCTGGACAACCTCTATACCTCCCGC
AGCGACAACACGGGGCCACACTCCGCAGCTGCAATCCTAGCACAAAAGAT
TGCAACCAAATCCACATCCGAAACCGCTGCACTCAGCACCCAGAACGCAG
GCGCCACACAACAACCCGAACCCACAGCTCCGTCATCCTCGGGTGTCCTT
GCCCACGCCGCAGCATTCGACGGCCGCCTCGCCCTCATCGAAGCCGCCAT
GGGCATCTCCAGCTCCTCCAACCCCTTCGTCAGCGACGGCATCTCCGAAC
CCGCCCTCCAGCCCGTCCTCCCAGCCGTCGACCACCTCACATCCCGCCTC
ACCACCCTCATGAACATCCTTGTCGGCCCGAACCCCGTCTCCGCCGTGCC
AACAATGGGCTCCGCACCCCCCTCCACAACAGTCACCACCCCGCATCTCG
AGACCCTCTCCACTCGAGTCCGCAAACTCACCGCAGACACAGAAGCCCTC
GCATCCGCGCGGAAACGTGCCGTGGACGCCGCCAAGGCAGCTCAGAACGC
GCGCATCGCTTCCGCCGCTATCGAGCCCTCAGACATGTCCGTCTCGTCAT
CCTCCGCTACGGAAGTCGACCCGGCTGCTACGCAGCGCGATGAACAAGCT
ACCAAGATCCAGGCCCTCTACGCTACTCTCCCCACCATTCAGTCCCTCCA
TCCCATCCTTCCCAGCGTGCTGGAGCGGCTTCGCTCCCTTCGCGCTATCC
ATGCGGGTGCTGCACAGGCTTCGGAGTCACTCGATACGCTGGAGAAGAGA
CAGGCGGATATGGCAAGGGAGATTGAGCAGTGGCGCGAGGGTCTGCAGGT
AGTCGAGGAGAAGATGGGCCAGGGCGAAGCAGCGATGAAGAGTAATATCG
AGCTTGTCGAACCTTGGGTTCGGGATCTGGAGGCGCGGCTGGGTCGGTTG
GAGGGGCAGGGCGCATGAATGTCTTTCAATAGGAAGTATGCTGGTCTTCC
CGACCTGGATCTCGCTCCGGATATCTACGAGACCCCCGATCTGACCGACG
AAGCATCTACCGTTCCGACTACAACTATCCGCACCGCATCCAACGTAGAC
GATGACGCCGGCTCCAACTCCGACATCGACCGGCAGGGGATCAATGCAGA
CGAGGCACGCGCCCACTTCTTAGGAGCCACGGTCGACGCGCGCGATGTCA
ACTTCTCCGACAGTATCGCGATGAAGCGGAAGGCATACAAGAACAAGAAC
CGTCGCCGGCGCAGAAATGAGAACGGTTCACAAGAGCCCGAAGACATCAG
CGACAGCGAAGAGGAAAGCCTAGAGAGGAAGCTCGCCCGCCTTCGCAGGG
AAGTGGAGGAACTGAAAGACGAGATGGCCGCTCGACAGACCGAAACCGAA
CCGGAAGCCGCAGAAGGGAAGGAGCCCACGGACGACGGCGTCCTCGAATT
GAGCCGCGCCCTGGACAACCTCTATACCTCCCGCAGCGACAACACGGGGC
CACACTCCGCAGCTGCAATCCTAGCACAAAAGATTGCAACCAAATCCACA
TCCGAAACCGCTGCACTCAGCACCCAGAACGCAGGCGCCACACAACAACC
CGAACCCACAGCTCCGTCATCCTCGGGTGTCCTTGCCCACGCCGCAGCAT
TCGACGGCCGCCTCGCCCTCATCGAAGCCGCCATGGGCATCTCCAGCTCC
TCCAACCCCTTCGTCAGCGACGGCATCTCCGAACCCGCCCTCCAGCCCGT
CCTCCCAGCCGTCGACCACCTCACATCCCGCCTCACCACCCTCATGAACA
TCCTTGTCGGCCCGAACCCCGTCTCCGCCGTGCCAACAATGGGCTCCGCA
CCCCCCTCCACAACAGTCACCACCCCGCATCTCGAGACCCTCTCCACTCG
AGTCCGCAAACTCACCGCAGACACAGAAGCCCTCGCATCCGCGCGGAAAC
GTGCCGTGGACGCCGCCAAGGCAGCTCAGAACGCGCGCATCGCTTCCGCC
GCTATCGAGCCCTCAGACATGTCCGTCTCGTCATCCTCCGCTACGGAAGT
CGACCCGGCTGCTACGCAGCGCGATGAACAAGCTACCAAGATCCAGGCCC
TCTACGCTACTCTCCCCACCATTCAGTCCCTCCATCCCATCCTTCCCAGC
GTGCTGGAGCGGCTTCGCTCCCTTCGCGCTATCCATGCGGGTGCTGCACA
GGCTTCGGAGTCACTCGATACGCTGGAGAAGAGACAGGCGGATATGGCAA
GGGAGATTGAGCAGTGGCGCGAGGGTCTGCAGGTAGTCGAGGAGAAGATG
GGCCAGGGCGAAGCAGCGATGAAGAGTAATATCGAGCTTGTCGAACCTTG
GGTTCGGGATCTGGAGGCGCGGCTGGGTCGGTTGGAGGGGCAGGGCGCAT
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005869 | dynactin complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007017 | microtubule-based process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010598-T1.utr5p1 | KJC3_010598-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010598-T1.utr3p1 | KJC3_010598-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR028133 |
| DBxref | PFAM:PF04912 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3831212..3833010 + |
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