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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3874922..3876849- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010615-T1 ID=KJC3_010615-T1|Name=KJC3_010615-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1928bp|location=Sequence derived from alignment at ch7:3874922..3876849- (Aspergillus niger KJC3)
GAGAAATGCAGACGGACTGACTCTCATGAGGAGAGCCTAGATGAACTGCT
ATCATTGTCATTCCTTCGCATCCAGATCTCCATCTCTATTGACAAATGCC
ATTCTAATCCGAGCTTGTGTTCCACCTCCCACTGCCACCATCCGAGACCA
TTCCTCTGTGCTGCAACTAGCAGAAGCTCATTGACCAATTACCGGACAGC
TCCCATTTCATCATCGCCTAGCTAGACGTCGTGGACCCTTCCTCGCTCAC
TCTTCCACTTTCTATCGCTCTTCCCATCCACTCATGCTTCGTTCCTAGAC
GGGGGCTTAGCTACGCCCTCCTTGATTTCAACTGCGCATCGCCATTCTGA
ACGACCATTGAACATCTACAGCGTTGCATTCATACATCGCCGAACCCCAA
GTCGCGTACTGGTTTGCGCCCGTCGGCCCATCTCTCTGCACAGGCGTCCA
TTCGCCTCACCCCGATCTCTACATCGAGCCGGGCTTGATCCCGCATATTG
GATATCAAGTTAAGCTACATACGCTCGACTATCCTTCAGCTGCCTTATTT
TATTCATCCACCTTGAAAGATGCCAGCGGATTACTCATCCACCGCCCGGG
CACTGTCCGTCTCGACCTCATCCCCAGAACCTCTGTCTCCGTCGGAGGAT
GAGGCTTATCCACCATGGAGCCGAAGAGCACCGGGGAGGCGAAATTCAGC
CAGTATCTCCGGCGGACGATCCGCTACCCTCCGAGATCAAATCATAGACC
GAGCAACCAAGACATACCACCAGATCCTGGAATCGTGGCGCAAGATGAAC
TTCTGGCAAAGGGTAGGGGCGGTGGCCGCGTTCTTACTGGCCAATCTCCT
TGGAATCGGCTTTCTTGTCTTCACCGGGAAGGTCTTCATTTGGCTTCAAC
CTGTGGCGGCACAATGGGAGCATTCTCCTCTAGCCTACGGGGTTTTGTGG
TTGTGTGTTTTCTTTGTCTCCTTTCCGCCGTTGGTTGGATGGTCCACATT
TGGAACTATGGCGGGCTACATCTTTGGGATATGGAAAGGGTGAGTTGAGA
ATTTTCATGGGTGCGCAAGAGGGCTAACCCCGTTCATAGATGGCTTCTTT
ATGCTTCCGCAACTGTGCTTGGGTCGACTTGTTCTTTCATTGTGTCTCGG
ACAATCCTATCCAAATTCGTCCACCGGTTGATGGAACGCGATAAGAGATT
TGCAGCTTTGTCGTTGACGTTGAAGTATGACGGTTTGAAATTGCTGTGTA
TGATCCGCCTCTGCCCGCTGCCCTACTCGGTATGCAATGGGGCGGTCTCA
ACCTTCCCCACGGTTCAGCCGTTGATGTATGGGCTTGCCACAGCACTCAT
TTCGCCGAAGCTGCTGGTTCCAGCCTTCATCGGCAACCGGTTACGCGTCT
TGTCGGAGAACAATGAAGAGATGAGTGCAGGCTCCAAGGCTGTCAATATT
TGCAGCATCATCGTCTCCATTTGCATCGGTATCTTCACGGGATTGTATAT
ATATAGAAGGTAAGAGTCAAGATATCTCCTTGCATTGTCCCGATATCCGA
GACTAACGCAATTCAACAAGAACATTGGCCCGGGCCAAAGAGCTAGAGGC
GAAAGAAAGGGAGGACATCCGACGCTCGCTGCAAGCTGACCATGCTGCCC
ATCGTCCCCATGACGCCTTTTCCGAGGATCCTGAAGTCAACAGTGCGGCC
GCTCTTCTTGCGCGCGATGAAGAGGAACGCATCGGATTCGGCGACCTCGA
CGACGACCACGTCGACCTGGCGATTGACGATGAGAGTGGCAGTGAGACCT
CCCCCCACCGTACACAAGCCTCCCCTTATCGCGATGAGTTTACCGACAAC
GATTCAGATGTCTTCAAGGATGGAGATGGGACCCATGAGGAAATGTATAC
CCTACATACACACGTGCGGAGACCCTAG back to topCoding sequence (CDS) from alignment at ch7:3874922..3876849- >KJC3_010615-T1 ID=KJC3_010615-T1|Name=KJC3_010615-T1|organism=Aspergillus niger KJC3|type=CDS|length=3744bp|location=Sequence derived from alignment at ch7:3874922..3876849- (Aspergillus niger KJC3)
AACATTGGCCCGGGCCAAAGAGCTAGAGGCGAAAGAAAGGGAGGACATCC
GACGCTCGCTGCAAGCTGACCATGCTGCCCATCGTCCCCATGACGCCTTT
TCCGAGGATCCTGAAGTCAACAGTGCGGCCGCTCTTCTTGCGCGCGATGA
AGAGGAACGCATCGGATTCGGCGACCTCGACGACGACCACGTCGACCTGG
CGATTGACGATGAGAGTGGCAGTGAGACCTCCCCCCACCGTACACAAGCC
TCCCCTTATCGCGATGAGTTTACCGACAACGATTCAGATGTCTTCAAGGA
TGGAGATGGGACCCATGAGGAAATGTATACCCTACATACACACGTGCGGA
GACCCTAGATGGCTTCTTTATGCTTCCGCAACTGTGCTTGGGTCGACTTG
TTCTTTCATTGTGTCTCGGACAATCCTATCCAAATTCGTCCACCGGTTGA
TGGAACGCGATAAGAGATTTGCAGCTTTGTCGTTGACGTTGAAGTATGAC
GGTTTGAAATTGCTGTGTATGATCCGCCTCTGCCCGCTGCCCTACTCGGT
ATGCAATGGGGCGGTCTCAACCTTCCCCACGGTTCAGCCGTTGATGTATG
GGCTTGCCACAGCACTCATTTCGCCGAAGCTGCTGGTTCCAGCCTTCATC
GGCAACCGGTTACGCGTCTTGTCGGAGAACAATGAAGAGATGAGTGCAGG
CTCCAAGGCTGTCAATATTTGCAGCATCATCGTCTCCATTTGCATCGGTA
TCTTCACGGGATTGTATATATATAGAAGATGCCAGCGGATTACTCATCCA
CCGCCCGGGCACTGTCCGTCTCGACCTCATCCCCAGAACCTCTGTCTCCG
TCGGAGGATGAGGCTTATCCACCATGGAGCCGAAGAGCACCGGGGAGGCG
AAATTCAGCCAGTATCTCCGGCGGACGATCCGCTACCCTCCGAGATCAAA
TCATAGACCGAGCAACCAAGACATACCACCAGATCCTGGAATCGTGGCGC
AAGATGAACTTCTGGCAAAGGGTAGGGGCGGTGGCCGCGTTCTTACTGGC
CAATCTCCTTGGAATCGGCTTTCTTGTCTTCACCGGGAAGGTCTTCATTT
GGCTTCAACCTGTGGCGGCACAATGGGAGCATTCTCCTCTAGCCTACGGG
GTTTTGTGGTTGTGTGTTTTCTTTGTCTCCTTTCCGCCGTTGGTTGGATG
GTCCACATTTGGAACTATGGCGGGCTACATCTTTGGGATATGGAAAGGAA
CATTGGCCCGGGCCAAAGAGCTAGAGGCGAAAGAAAGGGAGGACATCCGA
CGCTCGCTGCAAGCTGACCATGCTGCCCATCGTCCCCATGACGCCTTTTC
CGAGGATCCTGAAGTCAACAGTGCGGCCGCTCTTCTTGCGCGCGATGAAG
AGGAACGCATCGGATTCGGCGACCTCGACGACGACCACGTCGACCTGGCG
ATTGACGATGAGAGTGGCAGTGAGACCTCCCCCCACCGTACACAAGCCTC
CCCTTATCGCGATGAGTTTACCGACAACGATTCAGATGTCTTCAAGGATG
GAGATGGGACCCATGAGGAAATGTATACCCTACATACACACGTGCGGAGA
CCCTAGATGGCTTCTTTATGCTTCCGCAACTGTGCTTGGGTCGACTTGTT
CTTTCATTGTGTCTCGGACAATCCTATCCAAATTCGTCCACCGGTTGATG
GAACGCGATAAGAGATTTGCAGCTTTGTCGTTGACGTTGAAGTATGACGG
TTTGAAATTGCTGTGTATGATCCGCCTCTGCCCGCTGCCCTACTCGGTAT
GCAATGGGGCGGTCTCAACCTTCCCCACGGTTCAGCCGTTGATGTATGGG
CTTGCCACAGCACTCATTTCGCCGAAGCTGCTGGTTCCAGCCTTCATCGG
CAACCGGTTACGCGTCTTGTCGGAGAACAATGAAGAGATGAGTGCAGGCT
CCAAGGCTGTCAATATTTGCAGCATCATCGTCTCCATTTGCATCGGTATC
TTCACGGGATTGTATATATATAGAAGATGCCAGCGGATTACTCATCCACC
GCCCGGGCACTGTCCGTCTCGACCTCATCCCCAGAACCTCTGTCTCCGTC
GGAGGATGAGGCTTATCCACCATGGAGCCGAAGAGCACCGGGGAGGCGAA
ATTCAGCCAGTATCTCCGGCGGACGATCCGCTACCCTCCGAGATCAAATC
ATAGACCGAGCAACCAAGACATACCACCAGATCCTGGAATCGTGGCGCAA
GATGAACTTCTGGCAAAGGGTAGGGGCGGTGGCCGCGTTCTTACTGGCCA
ATCTCCTTGGAATCGGCTTTCTTGTCTTCACCGGGAAGGTCTTCATTTGG
CTTCAACCTGTGGCGGCACAATGGGAGCATTCTCCTCTAGCCTACGGGGT
TTTGTGGTTGTGTGTTTTCTTTGTCTCCTTTCCGCCGTTGGTTGGATGGT
CCACATTTGGAACTATGGCGGGCTACATCTTTGGGATATGGAAAGGAACA
TTGGCCCGGGCCAAAGAGCTAGAGGCGAAAGAAAGGGAGGACATCCGACG
CTCGCTGCAAGCTGACCATGCTGCCCATCGTCCCCATGACGCCTTTTCCG
AGGATCCTGAAGTCAACAGTGCGGCCGCTCTTCTTGCGCGCGATGAAGAG
GAACGCATCGGATTCGGCGACCTCGACGACGACCACGTCGACCTGGCGAT
TGACGATGAGAGTGGCAGTGAGACCTCCCCCCACCGTACACAAGCCTCCC
CTTATCGCGATGAGTTTACCGACAACGATTCAGATGTCTTCAAGGATGGA
GATGGGACCCATGAGGAAATGTATACCCTACATACACACGTGCGGAGACC
CTAGATGGCTTCTTTATGCTTCCGCAACTGTGCTTGGGTCGACTTGTTCT
TTCATTGTGTCTCGGACAATCCTATCCAAATTCGTCCACCGGTTGATGGA
ACGCGATAAGAGATTTGCAGCTTTGTCGTTGACGTTGAAGTATGACGGTT
TGAAATTGCTGTGTATGATCCGCCTCTGCCCGCTGCCCTACTCGGTATGC
AATGGGGCGGTCTCAACCTTCCCCACGGTTCAGCCGTTGATGTATGGGCT
TGCCACAGCACTCATTTCGCCGAAGCTGCTGGTTCCAGCCTTCATCGGCA
ACCGGTTACGCGTCTTGTCGGAGAACAATGAAGAGATGAGTGCAGGCTCC
AAGGCTGTCAATATTTGCAGCATCATCGTCTCCATTTGCATCGGTATCTT
CACGGGATTGTATATATATAGAAGATGCCAGCGGATTACTCATCCACCGC
CCGGGCACTGTCCGTCTCGACCTCATCCCCAGAACCTCTGTCTCCGTCGG
AGGATGAGGCTTATCCACCATGGAGCCGAAGAGCACCGGGGAGGCGAAAT
TCAGCCAGTATCTCCGGCGGACGATCCGCTACCCTCCGAGATCAAATCAT
AGACCGAGCAACCAAGACATACCACCAGATCCTGGAATCGTGGCGCAAGA
TGAACTTCTGGCAAAGGGTAGGGGCGGTGGCCGCGTTCTTACTGGCCAAT
CTCCTTGGAATCGGCTTTCTTGTCTTCACCGGGAAGGTCTTCATTTGGCT
TCAACCTGTGGCGGCACAATGGGAGCATTCTCCTCTAGCCTACGGGGTTT
TGTGGTTGTGTGTTTTCTTTGTCTCCTTTCCGCCGTTGGTTGGATGGTCC
ACATTTGGAACTATGGCGGGCTACATCTTTGGGATATGGAAAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010615-T1.utr5p1 | KJC3_010615-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032816 |
| DBxref | PFAM:PF09335 |
| Product | Tlg2-vesicle protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3874922..3876849 - |
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