|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3877462..3880596+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010616-T1 ID=KJC3_010616-T1|Name=KJC3_010616-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3135bp|location=Sequence derived from alignment at ch7:3877462..3880596+ (Aspergillus niger KJC3)
CATCAATCAATCAATACCAAATCCCTCCGCTCTCTCCGACTTTCTCGCTG
CCTCTTTCTTGCTTCTCTCCCCTTCTTTCTACTTACTGGCTTTACCCCTC
TCACTTCTCCTCCTCCTCTATTCTCTCTCTCTTTCTCTCTCTCTCTCTGT
GTGTGTCTTGCGCGTCCTCCCTCTTTGGACCTCCTCTTTTTCCATCTCTC
CAACCCAGATCCTCTTCTTATCTTCTCTCCCTTCCTTCCTTCGTTTACCG
GATCCACTCTCTTCTCCCCCTCCCCGTCATCATCGATCATTGCACGACGG
TAGATGCGATGTAATCACCCATGGACTTCAAGCTTGTCCCCTGTCGCCTG
TCAACCTTGCTAACATCCCTGTTTTTTATTCTTCAAGATTTCCTCTTCGT
TTCATGAATTCCAGCTGTCCTGGGAACAAATCATGGACGTGGATTATCGA
ATCTGACCTGTCTTCTGTTGTCTCCTTGATCTGATTACTGTTCCCAATCT
CCAAACGCCGATTACCCCACATCTTCCTGCACACACCGTGTATCCGTCGC
CCTCCTACTTCTTCCTTCCTTCGTTCAGCCCACCCGACGATCCAGAATGA
TTCAAGAAGACCTCCTCGAGGACTGTCTTCGCATCCTCCAGGATCAAGCT
CTGGATGAAGAAGAGCAAGTCGAGAAAATAGAGGATTTTGTACGCGAAAA
GACCTCCTTATCAGGTCCGTCCCTAGAAAATGCCGTCCTCGACATCCTCT
GGCGCCATCGCAATCGCACCTTGCCAGACTCCTCCCCTCCGCCGCCTCGT
CACACGGTGATTCGACGCTCGTCTCCTGCCCCTTGGCAGATGGCGCGTTC
TGCGACCCCATTATCCCCTCACTCGAACCTAGGCACAAGCCCCGGAAGTA
CCTCGTGGCTCCAGAGCTCCCGAGGCGGCTTATCCCGGCCACCCCTGTCC
TCCACCGTGTCGCCTTTCACTTCTCCGCGCCCATCGCCTCGACTAGCTCT
TGCGCAACCCATCCCACACTCCCCTAATCTGAACGCATACGAATTCTCCG
ATCAAAGCCAAGTGTCCGATTTCTACGGCGACCTGGGTAGCGATAGCAAT
GTGGACTGGCTGGTTGCCGACGACGCTAACAGCGTCACCTCGTCTATTGG
GACCCCGAGCATCACAGGAGGGCTGAGCGCCACGGCACCCGAGTTTGTGC
CCGATATGAGCCCGCACGATATCTTACGCACTGTCCTGGGAGACAAGCGA
TCGAATGATGAAATTGAGGCGGCCCTGGAAGCCAACAGCTACGACTTGGG
CGCGACGATCGCGTCGCTGTCGCAACCCGGTGACGGTGACTCCATCTTGC
CGCACTCGGAGGACGGCCACGTTGTGGTCGGAAAGTCGATGTCAATGGAG
CCGCCCAAGATTGCTACCCCTCCCAGCCAGAGTCGCAGTCCAGTGGTCTG
CAAGTACTGGTTGTCTACCGGCCAATGTCTCCGTGCCGATTGCCGGTTTA
GTCACGATCTAACCAATCACCTTTGCAAGTGAGTATACCCCCGAGCTTCC
CAATGCCTCGTCCATGCAAGAACAGGACACTAATAGCAGCACATTCGTAC
AGGTATTGGGTTATGGGGAACTGCTTGGCAGGTGACGGCTGCCCGTTTTC
GCATGACCCTTCAGCTCTCGTTGCAAATCTCAGTGTGGCAGACGGTACGC
CAGGCACAGCATCACCTGGCACGTCATTCCACATGGACAGTACCTCGGAG
GCCTTCCCTCCCCTGCAGTCTACTGCCGGGATGGGAGACCAATGGGCTGG
CCAGTATCTTGGCAAGTATCCAGGTCATTTGTCTGCATTCCCTGGCAGCA
AGTACGTGCCTCAGGCCATGCAATTTGCTGTTGGTAAGCGAAATGGGAGT
ATGACCAACCTGTCCCGCCCTCATTCTCGACCAGGGAGTCGGCATCAGCA
TCGTGAGCTGAACCCGGCTGCTCCATCGGTCGATGATCCAGACGCATTCC
CCACCCTTGCTGCTGTCAGTGCCAAGAATACGGGCAAGAAGCATCATGGG
AAACGCGGAAATCGCGACAATAATTCAAGCAGAGAAAACATGCCTACATC
ACTAGCGGACGTGGTTCGCATGTCCCCATCTCCTGCGCCTGGGAAGGGGA
AATCTTCGTCTAAGAACACTCGGGATGGGGTTAAAGGCCGCGAACATAGC
GCAGCCGCTCAGGCAATCCCACCGCCGCAGAACATTCCCTGGTTGGAAAC
CGGTTCCCGAGCGAACCAACAATATATCAAATACCGGACGGAGGCTATCC
GCCATGGTACGGTGAGGAACAAATTCCTTCAAAGGTAAATTGACACTTTT
GAAGTCCGAAGGCTTGAAGCTAATTGTCTGGTTAGTGCTGCTCAAGCGTG
GAACCGCAATGACGCAAGAGCCGCAAAGGCTTTGTCTCTGCGGGGTCAGG
CTGAAAACGAAGCCATGCGCAAGTGTCATCGGGAAGCAGCCCGGCAACTT
TACGAAGAACGTAACAAACATCTCTTAGACGCTGGTCTGGATGATGCAGC
GGAGGAACTGTACGTTGACCTGCATGGCTTGCATCCCGAGGAGGCCATTG
AATACCTGGAAAAGATCCTGCTCAAGCATGCCCGCGAAGGCCGGCGCGTA
GTCTACGCGATCACAGGCACGGGCCATCATTCCAAGAATGGCAAGGACAA
GATCGGCAAGGCCGTCAAGGCATGGTTAAATGAATGGAAGTACCTGTTCC
GCGAGTTCAGTGTCCCCGGCGAGCGGGGTGGATATGTTGGTGGAATCCTG
GGGATTGACCCCACCAGCTACGATAAATCACTAGCCAAGAGTCTGGAAGA
TGATGCAAACAGCAAGGCGGATGCGGACCAGCCCATCTTGACCATGGGCA
AGATCCAGCTGTTGAAGCGCGAAGACCTGGAGTCAAAGCAATAATAAACA
GCAAATCTTCTTCAAACACTCAAGAAAACCTTTCTTGATGCTCGATCTCC
CGAATTCAACATTACCTCCAACTCAGCCTAGCATACGCTTTGGGAGACTA
CTGGGTTTTATGTGAATTCTTGTAGGGAAGTGATAGTCCCGGAGTATAAG
AGGTGATCGATAGACTATCTACTCAAATCTTTTCT back to topCoding sequence (CDS) from alignment at ch7:3877462..3880596+ >KJC3_010616-T1 ID=KJC3_010616-T1|Name=KJC3_010616-T1|organism=Aspergillus niger KJC3|type=CDS|length=6669bp|location=Sequence derived from alignment at ch7:3877462..3880596+ (Aspergillus niger KJC3)
ATGATTCAAGAAGACCTCCTCGAGGACTGTCTTCGCATCCTCCAGGATCA
AGCTCTGGATGAAGAAGAGCAAGTCGAGAAAATAGAGGATTTTGTACGCG
AAAAGACCTCCTTATCAGGTCCGTCCCTAGAAAATGCCGTCCTCGACATC
CTCTGGCGCCATCGCAATCGCACCTTGCCAGACTCCTCCCCTCCGCCGCC
TCGTCACACGGTGATTCGACGCTCGTCTCCTGCCCCTTGGCAGATGGCGC
GTTCTGCGACCCCATTATCCCCTCACTCGAACCTAGGCACAAGCCCCGGA
AGTACCTCGTGGCTCCAGAGCTCCCGAGGCGGCTTATCCCGGCCACCCCT
GTCCTCCACCGTGTCGCCTTTCACTTCTCCGCGCCCATCGCCTCGACTAG
CTCTTGCGCAACCCATCCCACACTCCCCTAATCTGAACGCATACGAATTC
TCCGATCAAAGCCAAGTGTCCGATTTCTACGGCGACCTGGGTAGCGATAG
CAATGTGGACTGGCTGGTTGCCGACGACGCTAACAGCGTCACCTCGTCTA
TTGGGACCCCGAGCATCACAGGAGGGCTGAGCGCCACGGCACCCGAGTTT
GTGCCCGATATGAGCCCGCACGATATCTTACGCACTGTCCTGGGAGACAA
GCGATCGAATGATGAAATTGAGGCGGCCCTGGAAGCCAACAGCTACGACT
TGGGCGCGACGATCGCGTCGCTGTCGCAACCCGGTGACGGTGACTCCATC
TTGCCGCACTCGGAGGACGGCCACGTTGTGGTCGGAAAGTCGATGTCAAT
GGAGCCGCCCAAGATTGCTACCCCTCCCAGCCAGAGTCGCAGTCCAGTGG
TCTGCAAGTACTGGTTGTCTACCGGCCAATGTCTCCGTGCCGATTGCCGG
TTTAGTCACGATCTAACCAATCACCTTTGCAAGTATTGGGTTATGGGGAA
CTGCTTGGCAGGTGACGGCTGCCCGTTTTCGCATGACCCTTCAGCTCTCG
TTGCAAATCTCAGTGTGGCAGACGGTACGCCAGGCACAGCATCACCTGGC
ACGTCATTCCACATGGACAGTACCTCGGAGGCCTTCCCTCCCCTGCAGTC
TACTGCCGGGATGGGAGACCAATGGGCTGGCCAGTATCTTGGCAAGTATC
CAGGTCATTTGTCTGCATTCCCTGGCAGCAAGTACGTGCCTCAGGCCATG
CAATTTGCTGTTGGTAAGCGAAATGGGAGTATGACCAACCTGTCCCGCCC
TCATTCTCGACCAGGGAGTCGGCATCAGCATCGTGAGCTGAACCCGGCTG
CTCCATCGGTCGATGATCCAGACGCATTCCCCACCCTTGCTGCTGTCAGT
GCCAAGAATACGGGCAAGAAGCATCATGGGAAACGCGGAAATCGCGACAA
TAATTCAAGCAGAGAAAACATGCCTACATCACTAGCGGACGTGGTTCGCA
TGTCCCCATCTCCTGCGCCTGGGAAGGGGAAATCTTCGTCTAAGAACACT
CGGGATGGGGTTAAAGGCCGCGAACATAGCGCAGCCGCTCAGGCAATCCC
ACCGCCGCAGAACATTCCCTGGTTGGAAACCGGTTCCCGAGCGAACCAAC
AATATATCAAATACCGGACGGAGGCTATCCGCCATGGTACGGTGAGGAAC
AAATTCCTTCAAAGTGCTGCTCAAGCGTGGAACCGCAATGACGCAAGAGC
CGCAAAGGCTTTGTCTCTGCGGGGTCAGGCTGAAAACGAAGCCATGCGCA
AGTGTCATCGGGAAGCAGCCCGGCAACTTTACGAAGAACGTAACAAACAT
CTCTTAGACGCTGGTCTGGATGATGCAGCGGAGGAACTGTACGTTGACCT
GCATGGCTTGCATCCCGAGGAGGCCATTGAATACCTGGAAAAGATCCTGC
TCAAGCATGCCCGCGAAGGCCGGCGCGTAGTCTACGCGATCACAGGCACG
GGCCATCATTCCAAGAATGGCAAGGACAAGATCGGCAAGGCCGTCAAGGC
ATGGTTAAATGAATGGAAGTACCTGTTCCGCGAGTTCAGTGTCCCCGGCG
AGCGGGGTGGATATGTTGGTGGAATCCTGGGGATTGACCCCACCAGCTAC
GATAAATCACTAGCCAAGAGTCTGGAAGATGATGCAAACAGCAAGGCGGA
TGCGGACCAGCCCATCTTGACCATGGGCAAGATCCAGCTGTTGAAGCGCG
AAGACCTGGAGTCAAAGCAATAAATGATTCAAGAAGACCTCCTCGAGGAC
TGTCTTCGCATCCTCCAGGATCAAGCTCTGGATGAAGAAGAGCAAGTCGA
GAAAATAGAGGATTTTGTACGCGAAAAGACCTCCTTATCAGGTCCGTCCC
TAGAAAATGCCGTCCTCGACATCCTCTGGCGCCATCGCAATCGCACCTTG
CCAGACTCCTCCCCTCCGCCGCCTCGTCACACGGTGATTCGACGCTCGTC
TCCTGCCCCTTGGCAGATGGCGCGTTCTGCGACCCCATTATCCCCTCACT
CGAACCTAGGCACAAGCCCCGGAAGTACCTCGTGGCTCCAGAGCTCCCGA
GGCGGCTTATCCCGGCCACCCCTGTCCTCCACCGTGTCGCCTTTCACTTC
TCCGCGCCCATCGCCTCGACTAGCTCTTGCGCAACCCATCCCACACTCCC
CTAATCTGAACGCATACGAATTCTCCGATCAAAGCCAAGTGTCCGATTTC
TACGGCGACCTGGGTAGCGATAGCAATGTGGACTGGCTGGTTGCCGACGA
CGCTAACAGCGTCACCTCGTCTATTGGGACCCCGAGCATCACAGGAGGGC
TGAGCGCCACGGCACCCGAGTTTGTGCCCGATATGAGCCCGCACGATATC
TTACGCACTGTCCTGGGAGACAAGCGATCGAATGATGAAATTGAGGCGGC
CCTGGAAGCCAACAGCTACGACTTGGGCGCGACGATCGCGTCGCTGTCGC
AACCCGGTGACGGTGACTCCATCTTGCCGCACTCGGAGGACGGCCACGTT
GTGGTCGGAAAGTCGATGTCAATGGAGCCGCCCAAGATTGCTACCCCTCC
CAGCCAGAGTCGCAGTCCAGTGGTCTGCAAGTACTGGTTGTCTACCGGCC
AATGTCTCCGTGCCGATTGCCGGTTTAGTCACGATCTAACCAATCACCTT
TGCAAGTATTGGGTTATGGGGAACTGCTTGGCAGGTGACGGCTGCCCGTT
TTCGCATGACCCTTCAGCTCTCGTTGCAAATCTCAGTGTGGCAGACGGTA
CGCCAGGCACAGCATCACCTGGCACGTCATTCCACATGGACAGTACCTCG
GAGGCCTTCCCTCCCCTGCAGTCTACTGCCGGGATGGGAGACCAATGGGC
TGGCCAGTATCTTGGCAAGTATCCAGGTCATTTGTCTGCATTCCCTGGCA
GCAAGTACGTGCCTCAGGCCATGCAATTTGCTGTTGGTAAGCGAAATGGG
AGTATGACCAACCTGTCCCGCCCTCATTCTCGACCAGGGAGTCGGCATCA
GCATCGTGAGCTGAACCCGGCTGCTCCATCGGTCGATGATCCAGACGCAT
TCCCCACCCTTGCTGCTGTCAGTGCCAAGAATACGGGCAAGAAGCATCAT
GGGAAACGCGGAAATCGCGACAATAATTCAAGCAGAGAAAACATGCCTAC
ATCACTAGCGGACGTGGTTCGCATGTCCCCATCTCCTGCGCCTGGGAAGG
GGAAATCTTCGTCTAAGAACACTCGGGATGGGGTTAAAGGCCGCGAACAT
AGCGCAGCCGCTCAGGCAATCCCACCGCCGCAGAACATTCCCTGGTTGGA
AACCGGTTCCCGAGCGAACCAACAATATATCAAATACCGGACGGAGGCTA
TCCGCCATGGTACGGTGAGGAACAAATTCCTTCAAAGTGCTGCTCAAGCG
TGGAACCGCAATGACGCAAGAGCCGCAAAGGCTTTGTCTCTGCGGGGTCA
GGCTGAAAACGAAGCCATGCGCAAGTGTCATCGGGAAGCAGCCCGGCAAC
TTTACGAAGAACGTAACAAACATCTCTTAGACGCTGGTCTGGATGATGCA
GCGGAGGAACTGTACGTTGACCTGCATGGCTTGCATCCCGAGGAGGCCAT
TGAATACCTGGAAAAGATCCTGCTCAAGCATGCCCGCGAAGGCCGGCGCG
TAGTCTACGCGATCACAGGCACGGGCCATCATTCCAAGAATGGCAAGGAC
AAGATCGGCAAGGCCGTCAAGGCATGGTTAAATGAATGGAAGTACCTGTT
CCGCGAGTTCAGTGTCCCCGGCGAGCGGGGTGGATATGTTGGTGGAATCC
TGGGGATTGACCCCACCAGCTACGATAAATCACTAGCCAAGAGTCTGGAA
GATGATGCAAACAGCAAGGCGGATGCGGACCAGCCCATCTTGACCATGGG
CAAGATCCAGCTGTTGAAGCGCGAAGACCTGGAGTCAAAGCAATAAATGA
TTCAAGAAGACCTCCTCGAGGACTGTCTTCGCATCCTCCAGGATCAAGCT
CTGGATGAAGAAGAGCAAGTCGAGAAAATAGAGGATTTTGTACGCGAAAA
GACCTCCTTATCAGGTCCGTCCCTAGAAAATGCCGTCCTCGACATCCTCT
GGCGCCATCGCAATCGCACCTTGCCAGACTCCTCCCCTCCGCCGCCTCGT
CACACGGTGATTCGACGCTCGTCTCCTGCCCCTTGGCAGATGGCGCGTTC
TGCGACCCCATTATCCCCTCACTCGAACCTAGGCACAAGCCCCGGAAGTA
CCTCGTGGCTCCAGAGCTCCCGAGGCGGCTTATCCCGGCCACCCCTGTCC
TCCACCGTGTCGCCTTTCACTTCTCCGCGCCCATCGCCTCGACTAGCTCT
TGCGCAACCCATCCCACACTCCCCTAATCTGAACGCATACGAATTCTCCG
ATCAAAGCCAAGTGTCCGATTTCTACGGCGACCTGGGTAGCGATAGCAAT
GTGGACTGGCTGGTTGCCGACGACGCTAACAGCGTCACCTCGTCTATTGG
GACCCCGAGCATCACAGGAGGGCTGAGCGCCACGGCACCCGAGTTTGTGC
CCGATATGAGCCCGCACGATATCTTACGCACTGTCCTGGGAGACAAGCGA
TCGAATGATGAAATTGAGGCGGCCCTGGAAGCCAACAGCTACGACTTGGG
CGCGACGATCGCGTCGCTGTCGCAACCCGGTGACGGTGACTCCATCTTGC
CGCACTCGGAGGACGGCCACGTTGTGGTCGGAAAGTCGATGTCAATGGAG
CCGCCCAAGATTGCTACCCCTCCCAGCCAGAGTCGCAGTCCAGTGGTCTG
CAAGTACTGGTTGTCTACCGGCCAATGTCTCCGTGCCGATTGCCGGTTTA
GTCACGATCTAACCAATCACCTTTGCAAGTATTGGGTTATGGGGAACTGC
TTGGCAGGTGACGGCTGCCCGTTTTCGCATGACCCTTCAGCTCTCGTTGC
AAATCTCAGTGTGGCAGACGGTACGCCAGGCACAGCATCACCTGGCACGT
CATTCCACATGGACAGTACCTCGGAGGCCTTCCCTCCCCTGCAGTCTACT
GCCGGGATGGGAGACCAATGGGCTGGCCAGTATCTTGGCAAGTATCCAGG
TCATTTGTCTGCATTCCCTGGCAGCAAGTACGTGCCTCAGGCCATGCAAT
TTGCTGTTGGTAAGCGAAATGGGAGTATGACCAACCTGTCCCGCCCTCAT
TCTCGACCAGGGAGTCGGCATCAGCATCGTGAGCTGAACCCGGCTGCTCC
ATCGGTCGATGATCCAGACGCATTCCCCACCCTTGCTGCTGTCAGTGCCA
AGAATACGGGCAAGAAGCATCATGGGAAACGCGGAAATCGCGACAATAAT
TCAAGCAGAGAAAACATGCCTACATCACTAGCGGACGTGGTTCGCATGTC
CCCATCTCCTGCGCCTGGGAAGGGGAAATCTTCGTCTAAGAACACTCGGG
ATGGGGTTAAAGGCCGCGAACATAGCGCAGCCGCTCAGGCAATCCCACCG
CCGCAGAACATTCCCTGGTTGGAAACCGGTTCCCGAGCGAACCAACAATA
TATCAAATACCGGACGGAGGCTATCCGCCATGGTACGGTGAGGAACAAAT
TCCTTCAAAGTGCTGCTCAAGCGTGGAACCGCAATGACGCAAGAGCCGCA
AAGGCTTTGTCTCTGCGGGGTCAGGCTGAAAACGAAGCCATGCGCAAGTG
TCATCGGGAAGCAGCCCGGCAACTTTACGAAGAACGTAACAAACATCTCT
TAGACGCTGGTCTGGATGATGCAGCGGAGGAACTGTACGTTGACCTGCAT
GGCTTGCATCCCGAGGAGGCCATTGAATACCTGGAAAAGATCCTGCTCAA
GCATGCCCGCGAAGGCCGGCGCGTAGTCTACGCGATCACAGGCACGGGCC
ATCATTCCAAGAATGGCAAGGACAAGATCGGCAAGGCCGTCAAGGCATGG
TTAAATGAATGGAAGTACCTGTTCCGCGAGTTCAGTGTCCCCGGCGAGCG
GGGTGGATATGTTGGTGGAATCCTGGGGATTGACCCCACCAGCTACGATA
AATCACTAGCCAAGAGTCTGGAAGATGATGCAAACAGCAAGGCGGATGCG
GACCAGCCCATCTTGACCATGGGCAAGATCCAGCTGTTGAAGCGCGAAGA
CCTGGAGTCAAAGCAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010616-T1.utr3p1 | KJC3_010616-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036063 |
| DBxref | InterPro:IPR036855 |
| DBxref | InterPro:IPR013899 |
| DBxref | InterPro:IPR000571 |
| DBxref | InterPro:IPR002625 |
| DBxref | PFAM:PF01713 |
| DBxref | PFAM:PF08590 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3877462..3880596 + |
|
