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KJC3_010671-T1, KJC3_010671-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010671-T1
Unique NameKJC3_010671-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4040887..4042628+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010671-T1 ID=KJC3_010671-T1|Name=KJC3_010671-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1742bp|location=Sequence derived from alignment at ch7:4040887..4042628+ (Aspergillus niger KJC3)
TCTCCGCCTAGCATACATCTCCTAAGGCCAGCAGGATTCTCACCGTATTC
AAGCTCATTATCGCAGAGTGGATGGCAAGAGAGGGCTTCTAAATTCGCTA
AGCCTATCTTTGCTGTCCGTTACAGCTCTTTGAATTACCATGTCTCTCCA
GTCGTCTCTCACCTCTCTTCGAGCTTACCTTCGACCCTCAATAGCACCGT
CAGCTCATTTGCACCACATCAGACATGCATCACTGAACTCGGCCATTGGC
CGGGGCATCCGCAGGTCACAATATGTCGATGATGTACCTCAACGACGCAA
TACTGTCCGCGATGCTCGGGACGACCGGCGCAACAGAAACACAGCCAAGC
ATGACAAACGCCCAGAGGCGAGGGGACAGAGGTCTGGAGCTGCATTTGAT
AAGGAAGAATTTATCAAGACAGGGAAATTTCGCGCATTACCTCGCGCATA
TCAAAGAGAGACACCGGGACGGAAGAATAAGGACGGTATGAGGGAGGACC
CTGATTATGTCGGCGACGATCAGGACATCAGGAATGGGGGTCTCCGCGCA
TTATCCCAGGAATATCAGAGCAGGGGCCCGGCTCGCCCGGCTCGCAAAGT
CGTTCATCGGCCCACTGATGAATTCCCTGAAGAAGTCAAAAGCCTAGTCC
GACCTCCAAGCTCAGTACCTTACACTACGCCTGCATCGCAGTTTGTTTAT
GGAATTTCCGCATGTATGGCTGCATTACGCTGCAGCCGTCGCCGGATATA
CAAACTCTACATCTATCAATCAGAGGGTCGAGAACTATCCCCGGAGAAAA
AGGCTCTACGAAAACTGGCACTTCTGAAAAACGTGACGGTCAAAATGGCT
TTTGCAAGCTGGGGCCGGTTACTCGACCAGATGAGTGATGGTCGACCTCA
TCAAGGCTGTATTCTTGAGGTATCCCCTTTACCTCGGTTGCCAGTGCAAA
ACTTCAGGCCCGTTCCATCTCCGGAGGCGGACAACTTCGGCCTAGAGTTG
GGAGCGCAATCGCGGGAAGAGGCACAGGTAAATACCACGAACAACACGGT
TGACATCAACAACACCTTTGGAAAGAGATACCCTGTTGTTATACTACTCG
ACGGCATCGTCGATCCTGGGAATCTCGGCGCCATCATTCGCTCCGCCTAC
TACTTGGGAGCTGACGCTATCGTTTTCGCGGGCCGAAACTCAGCAGAGAT
ATCCCCAGTAGTTCTCAAGGCATCTGCGGGGGCCGCAGAACTTATGACTC
TTCTTCACGTGCGAAACGAAGTCGATTTCATTCGACGGTCAAAAGATAAC
GGGTGGCGGTTTTACGCCGCTGATGCCCCCGGCAAGGGATCTACATCTAC
TTATATTGACCCTGCCGAGTTTGGGAATGGTGCCCCTGTCGCCCAGGCAC
CGAGTGTTATTATGATGGGCAGTGAGGGCACGGGGCTAAGCCCCCATATC
CTCTCCCAGGCAGATGCTGTCATTGGCATCCCTGGCGCTAAATTCAGCCC
AGAGTTGGGCGCGGAGTCAGATCCTGCTAGAGTGGACAGCCTCAATGTTA
GCGTTGCGGCTGCTTTGTTGATGAATATGTTCCTTCGGGTGCCGGTTTCA
TTGGCCAAGAAGGAGGATACTAGGGTCTGGTGAGGAATGAACATCTGTAC
AATTATGTAAACGAGACATATGTATACATACGCCTTAATCGCATAGCATA
AATCCATAGCATACTAATATACTGAGAGGCTTTTCTCAAACG
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Coding sequence (CDS) from alignment at ch7:4040887..4042628+

>KJC3_010671-T1 ID=KJC3_010671-T1|Name=KJC3_010671-T1|organism=Aspergillus niger KJC3|type=CDS|length=1494bp|location=Sequence derived from alignment at ch7:4040887..4042628+ (Aspergillus niger KJC3)
ATGTCTCTCCAGTCGTCTCTCACCTCTCTTCGAGCTTACCTTCGACCCTC
AATAGCACCGTCAGCTCATTTGCACCACATCAGACATGCATCACTGAACT
CGGCCATTGGCCGGGGCATCCGCAGGTCACAATATGTCGATGATGTACCT
CAACGACGCAATACTGTCCGCGATGCTCGGGACGACCGGCGCAACAGAAA
CACAGCCAAGCATGACAAACGCCCAGAGGCGAGGGGACAGAGGTCTGGAG
CTGCATTTGATAAGGAAGAATTTATCAAGACAGGGAAATTTCGCGCATTA
CCTCGCGCATATCAAAGAGAGACACCGGGACGGAAGAATAAGGACGGTAT
GAGGGAGGACCCTGATTATGTCGGCGACGATCAGGACATCAGGAATGGGG
GTCTCCGCGCATTATCCCAGGAATATCAGAGCAGGGGCCCGGCTCGCCCG
GCTCGCAAAGTCGTTCATCGGCCCACTGATGAATTCCCTGAAGAAGTCAA
AAGCCTAGTCCGACCTCCAAGCTCAGTACCTTACACTACGCCTGCATCGC
AGTTTGTTTATGGAATTTCCGCATGTATGGCTGCATTACGCTGCAGCCGT
CGCCGGATATACAAACTCTACATCTATCAATCAGAGGGTCGAGAACTATC
CCCGGAGAAAAAGGCTCTACGAAAACTGGCACTTCTGAAAAACGTGACGG
TCAAAATGGCTTTTGCAAGCTGGGGCCGGTTACTCGACCAGATGAGTGAT
GGTCGACCTCATCAAGGCTGTATTCTTGAGGTATCCCCTTTACCTCGGTT
GCCAGTGCAAAACTTCAGGCCCGTTCCATCTCCGGAGGCGGACAACTTCG
GCCTAGAGTTGGGAGCGCAATCGCGGGAAGAGGCACAGGTAAATACCACG
AACAACACGGTTGACATCAACAACACCTTTGGAAAGAGATACCCTGTTGT
TATACTACTCGACGGCATCGTCGATCCTGGGAATCTCGGCGCCATCATTC
GCTCCGCCTACTACTTGGGAGCTGACGCTATCGTTTTCGCGGGCCGAAAC
TCAGCAGAGATATCCCCAGTAGTTCTCAAGGCATCTGCGGGGGCCGCAGA
ACTTATGACTCTTCTTCACGTGCGAAACGAAGTCGATTTCATTCGACGGT
CAAAAGATAACGGGTGGCGGTTTTACGCCGCTGATGCCCCCGGCAAGGGA
TCTACATCTACTTATATTGACCCTGCCGAGTTTGGGAATGGTGCCCCTGT
CGCCCAGGCACCGAGTGTTATTATGATGGGCAGTGAGGGCACGGGGCTAA
GCCCCCATATCCTCTCCCAGGCAGATGCTGTCATTGGCATCCCTGGCGCT
AAATTCAGCCCAGAGTTGGGCGCGGAGTCAGATCCTGCTAGAGTGGACAG
CCTCAATGTTAGCGTTGCGGCTGCTTTGTTGATGAATATGTTCCTTCGGG
TGCCGGTTTCATTGGCCAAGAAGGAGGATACTAGGGTCTGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0008173RNA methyltransferase activity
GO:0008168methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010671KJC3_010671Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010671-T1.utr5p1KJC3_010671-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010671-T1.exon1KJC3_010671-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010671-T1.cdsKJC3_010671-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010671-T1.utr3p1KJC3_010671-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010671-T1KJC3_010671-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029028
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR001537
DBxrefInterPro:IPR029026
DBxrefInterPro:IPR013123
DBxrefPFAM:PF08032
DBxrefPFAM:PF00588
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4040887..4042628 +
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