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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4078254..4080485+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010686-T1 ID=KJC3_010686-T1|Name=KJC3_010686-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2232bp|location=Sequence derived from alignment at ch7:4078254..4080485+ (Aspergillus niger KJC3)
CCAATTTCATCTTCTCCAACTATCTTATCTGGACCGACCAGCTCGTCTTC
CACTCTCTCTCACCACTACTCACTTCTATACTTACGACTTATTGACAGTA
TATGATGATCGCCAACTCTTATACCTCGTCATAACAATTTGTCACTGGCC
CCGCCGGCACGGTCATTTAGCGCATGCTACTTTCACTTCATCGCATGTAT
GATAGTCTAGTCTGTCGCGACCCTTTGGTGTGTTCCTTGTGAGAAGCCCT
ATCGTGCTGCTTGAGCTGTTAGCTCCTCATATGGGAACGTCGTACGGGGA
GGAAGATGGCGACAACAACAAAGGGCATTCCTGATGCCGACTTGGTGCAG
ACTTCCCCTACTGGTCATACTCACCCTGAAGCCCTACGATCTAATGACGA
GATGACCGACGAGAAGCGCGATCCTGACTCCATATCTCAAGGCTCCGACG
ACTCTCCTGTGATAGAAGGGAAAGACGAGGAATCACATGTTCGCACTACG
TTTTCAGAAGAAGAGCCAGAGGGTCCTATAGTGGTACCAAGATTGAAACG
AAGGGGACTTTTTGGTCAGCTCTCGTTGCTGGCCGAAGTTGAGAACCCGA
AGGTATATCCGCGGAAGACGAAATGGTTTATCACGTTCGTGGTAGCAGTG
GCTGGAGCTGCAGCTCCAATGGGTAGCTCCATCTTCTTTCGTAAGTCGTC
CGTGTCATCCAGTCGTGGGCCGATTTGGTCGTATTCTTACGTCAATGCTA
GCCTCTCTCTCCCAAGTATCGAAGGAACTGGGAACATCAACAACTATAAC
AAATTTATCAATCTCCCTATACATGCTTAGTATGTCCATCTTCCCACTGT
GGTGGTCGTCTTTCAGCGAAAGACTGGGGCGACGAACAATATACCTCATT
TCCTTCAGCCTCTTTGTCGTTTTCAACTCTCTCTGCGCTATCTCCAGTTC
AATAGCTATGCTCATTGTGCTGCGAATGTTGAGTGGTGGTGCATCTGCAT
CAGTTCAGGCTGTCGGTGCAGGGACCATTGCGGATCTTTGGGACCCTCAA
GAAAGGGGACGTGCTATGAATATCTTCTATCTCGGTCCGCTATGTGGGCC
TCTGATAGCCCCGATTGTAGGAGGTGCTTTAGCCGAACGCTGGGGATGGC
GAAGTACGCTTTGGTTTCTGGCCGCCTATGGAGGGCTCACCGTGGTTTTC
ATCTTCTTCGCCCTCCCAGAAACACTGGCAAACACAAAAATTCAGACACA
GGAGACGAATAACGAGCACGAGGAAACGATTAGACGTCAAGTGAGTCGGG
TATCCTCTCGACAGGTCGTTCAATTCACCACTAGGTGGTTAAGAGTCCTC
AAGATGGTGTTGCTCGACCCTTTGAAGATCATTCTTTACCTGCGCTATCC
TCCGGTTCTACTAACTGTATACTACGCAAGTATCACTTTTGGATCTCTTT
ATGTGCTAAACGTCAGTGTTGAGCATACATTCAGTGCTAGCCCATATAAC
TTCAGCACGATTATTGTTGGTCTACTATATATACCCAACTCGCTCGGATA
TGTTGTTGCTAGCACCTTCGGAGGCCGTTGGATGGATAGCATTATGCAGC
GGGAGGCAAAAAAAGCCAAACGATACGACGAGCATGGAAAATTGATCTAT
CGTCCTGAAGACCGGATGCGTGAGAATGCCTGGCTTGGCGCCATGCTCTA
CCCTGCTGGACTGATTTGGTATGGATGGTGCGCAGATCGAGGTGTATTCT
GGCTAGCACCGGTATGTTCTCAGACGTCTGACAGGAAGGGTGTCACACAC
CTGATGATGCTTATCCTCTCTGCTTCATGCAATTCATGACATCCTACTGA
CAAACTTTGTGTAGATGATTGCCAATTTCTTCTTTGGCGTTGGATCAATG
CTCATTTTCGGCATGGCAACGACTATGCTGACAGAGTTCATGCCCAAGAA
GTCCTCTGCAGGTGTCGCACTGAATAACTTCATGCGAAATATCTTCTCCT
GCGTGGGCTCAGTAGTCACCGCCCCCATCATCGATGCCATTGGCAATGGA
TGGCTTTTCACCATCCTTGGACTGGTTGCATTTGCAAGCAGCTCCGTCCT
CTTTGTGATGAAAGTTTACGGGCCACGGTGGAGGAAATCGATGGATGCTC
TGAGAACATGACGTCCTTCATGACCATTCTCGGTCATTGGCACGCTATGT
TGGGTGCCAAATGCTGATACTTGGGTCTAGAG back to topCoding sequence (CDS) from alignment at ch7:4078254..4080485+ >KJC3_010686-T1 ID=KJC3_010686-T1|Name=KJC3_010686-T1|organism=Aspergillus niger KJC3|type=CDS|length=5076bp|location=Sequence derived from alignment at ch7:4078254..4080485+ (Aspergillus niger KJC3)
ATGGCGACAACAACAAAGGGCATTCCTGATGCCGACTTGGTGCAGACTTC
CCCTACTGGTCATACTCACCCTGAAGCCCTACGATCTAATGACGAGATGA
CCGACGAGAAGCGCGATCCTGACTCCATATCTCAAGGCTCCGACGACTCT
CCTGTGATAGAAGGGAAAGACGAGGAATCACATGTTCGCACTACGTTTTC
AGAAGAAGAGCCAGAGGGTCCTATAGTGGTACCAAGATTGAAACGAAGGG
GACTTTTTGGTCAGCTCTCGTTGCTGGCCGAAGTTGAGAACCCGAAGGTA
TATCCGCGGAAGACGAAATGGTTTATCACGTTCGTGGTAGCAGTGGCTGG
AGCTGCAGCTCCAATGGGTAGCTCCATCTTCTTTCCCTCTCTCTCCCAAG
TATCGAAGGAACTGGGAACATCAACAACTATAACAAATTTATCAATCTCC
CTATACATGCTTAGTATGTCCATCTTCCCACTGTGGTGGTCGTCTTTCAG
CGAAAGACTGGGGCGACGAACAATATACCTCATTTCCTTCAGCCTCTTTG
TCGTTTTCAACTCTCTCTGCGCTATCTCCAGTTCAATAGCTATGCTCATT
GTGCTGCGAATGTTGAGTGGTGGTGCATCTGCATCAGTTCAGGCTGTCGG
TGCAGGGACCATTGCGGATCTTTGGGACCCTCAAGAAAGGGGACGTGCTA
TGAATATCTTCTATCTCGGTCCGCTATGTGGGCCTCTGATAGCCCCGATT
GTAGGAGGTGCTTTAGCCGAACGCTGGGGATGGCGAAGTACGCTTTGGTT
TCTGGCCGCCTATGGAGGGCTCACCGTGGTTTTCATCTTCTTCGCCCTCC
CAGAAACACTGGCAAACACAAAAATTCAGACACAGGAGACGAATAACGAG
CACGAGGAAACGATTAGACGTCAAGTGAGTCGGGTATCCTCTCGACAGGT
CGTTCAATTCACCACTAGGTGGTTAAGAGTCCTCAAGATGGTGTTGCTCG
ACCCTTTGAAGATCATTCTTTACCTGCGCTATCCTCCGGTTCTACTAACT
GTATACTACGCAAGTATCACTTTTGGATCTCTTTATGTGCTAAACGTCAG
TGTTGAGCATACATTCAGTGCTAGCCCATATAACTTCAGCACGATTATTG
TTGGTCTACTATATATACCCAACTCGCTCGGATATGTTGTTGCTAGCACC
TTCGGAGGCCGTTGGATGGATAGCATTATGCAGCGGGAGGCAAAAAAAGC
CAAACGATACGACGAGCATGGAAAATTGATCTATCGTCCTGAAGACCGGA
TGCGTGAGAATGCCTGGCTTGGCGCCATGCTCTACCCTGCTGGACTGATT
TGGTATGGATGGTGCGCAGATCGAGGTGTATTCTGGCTAGCACCGATGAT
TGCCAATTTCTTCTTTGGCGTTGGATCAATGCTCATTTTCGGCATGGCAA
CGACTATGCTGACAGAGTTCATGCCCAAGAAGTCCTCTGCAGGTGTCGCA
CTGAATAACTTCATGCGAAATATCTTCTCCTGCGTGGGCTCAGTAGTCAC
CGCCCCCATCATCGATGCCATTGGCAATGGATGGCTTTTCACCATCCTTG
GACTGGTTGCATTTGCAAGCAGCTCCGTCCTCTTTGTGATGAAAGTTTAC
GGGCCACGGTGGAGGAAATCGATGGATGCTCTGAGAACATGAATGGCGAC
AACAACAAAGGGCATTCCTGATGCCGACTTGGTGCAGACTTCCCCTACTG
GTCATACTCACCCTGAAGCCCTACGATCTAATGACGAGATGACCGACGAG
AAGCGCGATCCTGACTCCATATCTCAAGGCTCCGACGACTCTCCTGTGAT
AGAAGGGAAAGACGAGGAATCACATGTTCGCACTACGTTTTCAGAAGAAG
AGCCAGAGGGTCCTATAGTGGTACCAAGATTGAAACGAAGGGGACTTTTT
GGTCAGCTCTCGTTGCTGGCCGAAGTTGAGAACCCGAAGGTATATCCGCG
GAAGACGAAATGGTTTATCACGTTCGTGGTAGCAGTGGCTGGAGCTGCAG
CTCCAATGGGTAGCTCCATCTTCTTTCCCTCTCTCTCCCAAGTATCGAAG
GAACTGGGAACATCAACAACTATAACAAATTTATCAATCTCCCTATACAT
GCTTAGTATGTCCATCTTCCCACTGTGGTGGTCGTCTTTCAGCGAAAGAC
TGGGGCGACGAACAATATACCTCATTTCCTTCAGCCTCTTTGTCGTTTTC
AACTCTCTCTGCGCTATCTCCAGTTCAATAGCTATGCTCATTGTGCTGCG
AATGTTGAGTGGTGGTGCATCTGCATCAGTTCAGGCTGTCGGTGCAGGGA
CCATTGCGGATCTTTGGGACCCTCAAGAAAGGGGACGTGCTATGAATATC
TTCTATCTCGGTCCGCTATGTGGGCCTCTGATAGCCCCGATTGTAGGAGG
TGCTTTAGCCGAACGCTGGGGATGGCGAAGTACGCTTTGGTTTCTGGCCG
CCTATGGAGGGCTCACCGTGGTTTTCATCTTCTTCGCCCTCCCAGAAACA
CTGGCAAACACAAAAATTCAGACACAGGAGACGAATAACGAGCACGAGGA
AACGATTAGACGTCAAGTGAGTCGGGTATCCTCTCGACAGGTCGTTCAAT
TCACCACTAGGTGGTTAAGAGTCCTCAAGATGGTGTTGCTCGACCCTTTG
AAGATCATTCTTTACCTGCGCTATCCTCCGGTTCTACTAACTGTATACTA
CGCAAGTATCACTTTTGGATCTCTTTATGTGCTAAACGTCAGTGTTGAGC
ATACATTCAGTGCTAGCCCATATAACTTCAGCACGATTATTGTTGGTCTA
CTATATATACCCAACTCGCTCGGATATGTTGTTGCTAGCACCTTCGGAGG
CCGTTGGATGGATAGCATTATGCAGCGGGAGGCAAAAAAAGCCAAACGAT
ACGACGAGCATGGAAAATTGATCTATCGTCCTGAAGACCGGATGCGTGAG
AATGCCTGGCTTGGCGCCATGCTCTACCCTGCTGGACTGATTTGGTATGG
ATGGTGCGCAGATCGAGGTGTATTCTGGCTAGCACCGATGATTGCCAATT
TCTTCTTTGGCGTTGGATCAATGCTCATTTTCGGCATGGCAACGACTATG
CTGACAGAGTTCATGCCCAAGAAGTCCTCTGCAGGTGTCGCACTGAATAA
CTTCATGCGAAATATCTTCTCCTGCGTGGGCTCAGTAGTCACCGCCCCCA
TCATCGATGCCATTGGCAATGGATGGCTTTTCACCATCCTTGGACTGGTT
GCATTTGCAAGCAGCTCCGTCCTCTTTGTGATGAAAGTTTACGGGCCACG
GTGGAGGAAATCGATGGATGCTCTGAGAACATGAATGGCGACAACAACAA
AGGGCATTCCTGATGCCGACTTGGTGCAGACTTCCCCTACTGGTCATACT
CACCCTGAAGCCCTACGATCTAATGACGAGATGACCGACGAGAAGCGCGA
TCCTGACTCCATATCTCAAGGCTCCGACGACTCTCCTGTGATAGAAGGGA
AAGACGAGGAATCACATGTTCGCACTACGTTTTCAGAAGAAGAGCCAGAG
GGTCCTATAGTGGTACCAAGATTGAAACGAAGGGGACTTTTTGGTCAGCT
CTCGTTGCTGGCCGAAGTTGAGAACCCGAAGGTATATCCGCGGAAGACGA
AATGGTTTATCACGTTCGTGGTAGCAGTGGCTGGAGCTGCAGCTCCAATG
GGTAGCTCCATCTTCTTTCCCTCTCTCTCCCAAGTATCGAAGGAACTGGG
AACATCAACAACTATAACAAATTTATCAATCTCCCTATACATGCTTAGTA
TGTCCATCTTCCCACTGTGGTGGTCGTCTTTCAGCGAAAGACTGGGGCGA
CGAACAATATACCTCATTTCCTTCAGCCTCTTTGTCGTTTTCAACTCTCT
CTGCGCTATCTCCAGTTCAATAGCTATGCTCATTGTGCTGCGAATGTTGA
GTGGTGGTGCATCTGCATCAGTTCAGGCTGTCGGTGCAGGGACCATTGCG
GATCTTTGGGACCCTCAAGAAAGGGGACGTGCTATGAATATCTTCTATCT
CGGTCCGCTATGTGGGCCTCTGATAGCCCCGATTGTAGGAGGTGCTTTAG
CCGAACGCTGGGGATGGCGAAGTACGCTTTGGTTTCTGGCCGCCTATGGA
GGGCTCACCGTGGTTTTCATCTTCTTCGCCCTCCCAGAAACACTGGCAAA
CACAAAAATTCAGACACAGGAGACGAATAACGAGCACGAGGAAACGATTA
GACGTCAAGTGAGTCGGGTATCCTCTCGACAGGTCGTTCAATTCACCACT
AGGTGGTTAAGAGTCCTCAAGATGGTGTTGCTCGACCCTTTGAAGATCAT
TCTTTACCTGCGCTATCCTCCGGTTCTACTAACTGTATACTACGCAAGTA
TCACTTTTGGATCTCTTTATGTGCTAAACGTCAGTGTTGAGCATACATTC
AGTGCTAGCCCATATAACTTCAGCACGATTATTGTTGGTCTACTATATAT
ACCCAACTCGCTCGGATATGTTGTTGCTAGCACCTTCGGAGGCCGTTGGA
TGGATAGCATTATGCAGCGGGAGGCAAAAAAAGCCAAACGATACGACGAG
CATGGAAAATTGATCTATCGTCCTGAAGACCGGATGCGTGAGAATGCCTG
GCTTGGCGCCATGCTCTACCCTGCTGGACTGATTTGGTATGGATGGTGCG
CAGATCGAGGTGTATTCTGGCTAGCACCGATGATTGCCAATTTCTTCTTT
GGCGTTGGATCAATGCTCATTTTCGGCATGGCAACGACTATGCTGACAGA
GTTCATGCCCAAGAAGTCCTCTGCAGGTGTCGCACTGAATAACTTCATGC
GAAATATCTTCTCCTGCGTGGGCTCAGTAGTCACCGCCCCCATCATCGAT
GCCATTGGCAATGGATGGCTTTTCACCATCCTTGGACTGGTTGCATTTGC
AAGCAGCTCCGTCCTCTTTGTGATGAAAGTTTACGGGCCACGGTGGAGGA
AATCGATGGATGCTCTGAGAACATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010686-T1.utr5p1 | KJC3_010686-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010686-T1.utr3p1 | KJC3_010686-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4078254..4080485 + |
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