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KJC3_010694-T1, KJC3_010694-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010694-T1
Unique NameKJC3_010694-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4117425..4118480-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010694-T1 ID=KJC3_010694-T1|Name=KJC3_010694-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1056bp|location=Sequence derived from alignment at ch7:4117425..4118480- (Aspergillus niger KJC3)
GTCGACCGCAACAACAGCAATTAAAGATGTCTTTCCGTGGAGGCCGTGGC
GGTTTCGGTGGCCGTGGAGGTGAGCTCTAGCAACATAAGAGGTTGATCGC
AACGCTGGGTATGAGCTAACGAAAATTTTGTCGGATAGGTCGCGGAGGTT
TCCAGCAACCTCTCGGTCCCCCTGCCCAAGTTCTGGGTAATTATACGCCA
AAATGCGACTGGAGTGATTGGGACTAACGCGGAATAACTAGAGATGGGAA
CTGTCATGCATTCTTGCGAAGGCGAGATGGTTTGCGAATCGATCAACCCC
AAGATTCCTTACTTCAACGCCCCCATCTACCTCGAGAACAAGGTATGCTC
GACCTAGCTACTCTCCGCAAACTCGCGATGCGCTAACGCAATTCTTTAAT
AGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTATCAACCAGGTC
TACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCTCCTTCAAGCC
TGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCCTTGGAGAAGT
ATGTTGCGAGTTGTTCTTGATCATGATGGAAACTTGTCTAACTTTGCAAA
ACTAGGTTCCTTCCCAAGCCCAAGCCCGCTCCCGGTATGATTTCACTCGC
TTCGCGCAACAATCCAATGTGCTTGATCCTAACCAGAATACAGGTGCTGC
CAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATGCGCGGTG
GCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGGCGGCGCT
CCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTGGTGGCGG
TGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGAGGACCTC
GTGGTGGAGGCTTCCGAGGACGGTAGACAGTCTCTGTCTTGCCTGGTAGT
ACTGTCTTCTTACGGCGTTATGGGAAACGGGAGCTTTTACAGGAATTTAT
TTGTCTCTATATTCTTGTGCATCCTAGGAAAAATTTGCTGGTTCTCTGTA
CGCAGA
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Coding sequence (CDS) from alignment at ch7:4117425..4118480-

>KJC3_010694-T1 ID=KJC3_010694-T1|Name=KJC3_010694-T1|organism=Aspergillus niger KJC3|type=CDS|length=3600bp|location=Sequence derived from alignment at ch7:4117425..4118480- (Aspergillus niger KJC3)
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
GTGCTGCCAAGCCCAAGAGAGCTGGTGGTGGTGCCCGAGGCGGTCCCATG
CGCGGTGGCCGTGGTGGTGGCCGTGGTGGCCCCATGCGTGGTGGTCGCGG
CGGCGCTCCCAGAGGACGCGGTGGCCCCCGCGGTGGTGGCTTCCGTGGTG
GTGGCGGTGGTGGTTTCGGCGGTGGTTTCTCGAGGGGTGGTGGCAGAGGA
GGACCTCGTGGTGGAGGCTTCCGAGGACGGTAGGTTCCTTCCCAAGCCCA
AGCCCGCTCCCGACCCCTATCGGCAAGGTCGATGAAGTCCTGGGCCCTAT
CAACCAGGTCTACTTCACCATCAAGCCCCAGGAAGGAATTGTCGCGACCT
CCTTCAAGCCTGGTGACAAGGTCTACATTGGTGGCGACAAGCTCCTTCCC
TTGGAGAAAGATGGGAACTGTCATGCATTCTTGCGAAGGCGAGATGGTTT
GCGAATCGATCAACCCCAAGATTCCTTACTTCAACGCCCCCATCTACCTC
GAGAACAAGGTCGCGGAGGTTTCCAGCAACCTCTCGGTCCCCCTGCCCAA
GTTCTGGATGTCTTTCCGTGGAGGCCGTGGCGGTTTCGGTGGCCGTGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO:0001522pseudouridine synthesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010694KJC3_010694Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010694-T1KJC3_010694-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010694-T1.cdsKJC3_010694-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010694-T1.utr3p1KJC3_010694-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010694-T1.exon6KJC3_010694-T1.exon6Aspergillus niger KJC3exon
KJC3_010694-T1.exon5KJC3_010694-T1.exon5Aspergillus niger KJC3exon
KJC3_010694-T1.exon4KJC3_010694-T1.exon4Aspergillus niger KJC3exon
KJC3_010694-T1.exon3KJC3_010694-T1.exon3Aspergillus niger KJC3exon
KJC3_010694-T1.exon2KJC3_010694-T1.exon2Aspergillus niger KJC3exon
KJC3_010694-T1.exon1KJC3_010694-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010694-T1.utr5p1KJC3_010694-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR007504
DBxrefInterPro:IPR038664
DBxrefPFAM:PF04410
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4117425..4118480 -
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