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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4126545..4128725- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010698-T1 ID=KJC3_010698-T1|Name=KJC3_010698-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2181bp|location=Sequence derived from alignment at ch7:4126545..4128725- (Aspergillus niger KJC3)
CCGTCCCCGACCCCTCACTATGCGACAGAATGAGCTCCCCCATCTCTGCA
GTCAAGAGGAGAGCATGTGTGGCATGCACCATCGCCAAGGCGAAGTGTAC
GCCGCAGGCTGCCAACCTGTGCCAGCGATGCGCTCGTCTAGGCAAGTCAT
GCACGTACCTTGACCTTCCGCAGACAAAGCGTAAGCAGAGGCAGAACGCC
GCACCGAGGTAATCTCCTCTATCAAGGACAAATAGCACTTACAATGCTAA
CTAGTATGAATATAGCCGTGTAGAGCTTCTAGAGAAGAAAGTCGACCAGC
TCATGTCGCAGCTGGCGACCCTGACCCAGCAACAGAACGGGCAGCCATTA
GTATCGCCCGCCACCTCTACGAATGACAGCCCACCCATGAACACCAATAG
AGAATTGCACTCATCTTCCCATGAAGCCTCTACACTAGAGAACCCAACAG
ACACAGATATAGCCGCGCTGCTAGACGCAGCCAAAGACCCGTCCCACGGC
CCCGATCCGCCGACCAGCTCTGTTCTCGAGGACCGGCCATCACTCGTAGA
TCGGGGCCTCTTGAGTCCAGCTGAAACCGAGCGTATGCTCACAACCTTCA
AAGCTGACTTTGTGCGCAAGTTCCCCTTTGTCTTGATTCCGCATGGAGAG
ACAGCCGCTCGACTCAGAGTTCGAGAGCCGTTTCTGTTTCTGTGCATCGT
GGCAGCGACGGTGGGCAGTGCGCATCCTCTGCGCAGGACTGTCGCTGAGG
AGGTCATGACCCATGTTACGTCGAGGATCGTGGCACGATCGGAGAGGAGT
CTTGAGTTGCTTCGTGGATTGTTGGTTCATTGTGCGTGGTACTCGTATCC
TGCCGAGAAGTATCATCCGAGGCTTTTGCTGTTGGTTCAGCTTTGTACCT
CGATTTTGTATGATTTGGGACTGCATAAGAGGAATAGGCTGGGTGCGGAT
GAGCAGCGCGCGCTGCTGGGGACGTATTGGTTGTCTGTTGGGTGAGTTGA
TGTTGTCTTTCTCTTCGCTGGTACATGCGGCTTTGAGCTGATTATATATG
CGTGCTGGTAGGTTCTGTGGCACACTCGGCAGGCCGATTACTATGAAGCA
CGATGATCGAATAAAAGAGGCTGTTGAATGTCTAGCATCATCCACTACCA
CCGGATACGCATCAGATCGCTGGATCGCACCATTGCTCAACCTACAATCA
TTCATGGCAACAATGGATGAAATATACGCTTCGATGCAAGCAACCGGCGG
AAGTGCCCTCGTGCAAATCACGCGCGGCTCTTTACAGCGACAATTCGATA
GCATACAGACATGTATAGCAAAAGATCTCCCAAGCTGCCCTCCATCAACA
GGTACATCACCCACAGTCTCCCACATAATCATAACTGACCACCAACCAAC
CCATCCAGCAACCGCAATATCCACCGAACTCAAGTACGCAGAAATGCGTC
TCGAGGAACCGTCTCTCCGCGAAGATCTATGGACAGCAGACCCCATCAAC
GCCATCCGAACCAACATGCTAATGACCCTCATCCAACGAAGCAAGGAACT
CATACAAATCATTACGAGCCTCCCCGTATCGGAGATTCCCCAGTTGACAA
TAATAACTAATGCCCGTATCTGCGCCGCAGTGGGATACATCCCCACAGCC
GTATTGACACTTCTTAATCTCATAACTAGCACCTCCCCAACAACAAACCA
AGACCACCAAGCACAAATCCAATCCATCATCGACACAGCAGACTACCCAA
ATCTCGTCACCAAGCTAGCCACCGCACTGGAAACGAAATTGCAAGAAAAG
GGAATACGGATGTCCGCCCAAGACAAAGAGATGGATGTTGTAGGAAGTCT
CTGTTCGAAGATGCGGTTGTTGGCGCGTTGTTACCCATATCAAATTACGG
GTGTTGTGGGACGAGATATAAGGCAGGAGAATAGTGCGACCTCGTCAGCA
TCTGTCGTGATGACTGCAGGCCAACAGCAGGATAGTAGTATGGGTGTTGA
GGGTGAGATGTCTCAGGACTGGATGCCAGGTAATAGTATCTACGGCGATA
TGGAGGATATGTTTCCCCTGGATGATATTCAGTGGGATTCGCTGTTGAGG
GATTTTACTACGGGGTTTGGGTAGCTGTTCGGTAGTCTATACTACTATAG
TTCTATTATTGTTTAGTTGATTATAGTTGTG back to topCoding sequence (CDS) from alignment at ch7:4126545..4128725- >KJC3_010698-T1 ID=KJC3_010698-T1|Name=KJC3_010698-T1|organism=Aspergillus niger KJC3|type=CDS|length=7644bp|location=Sequence derived from alignment at ch7:4126545..4128725- (Aspergillus niger KJC3)
CAACCGCAATATCCACCGAACTCAAGTACGCAGAAATGCGTCTCGAGGAA
CCGTCTCTCCGCGAAGATCTATGGACAGCAGACCCCATCAACGCCATCCG
AACCAACATGCTAATGACCCTCATCCAACGAAGCAAGGAACTCATACAAA
TCATTACGAGCCTCCCCGTATCGGAGATTCCCCAGTTGACAATAATAACT
AATGCCCGTATCTGCGCCGCAGTGGGATACATCCCCACAGCCGTATTGAC
ACTTCTTAATCTCATAACTAGCACCTCCCCAACAACAAACCAAGACCACC
AAGCACAAATCCAATCCATCATCGACACAGCAGACTACCCAAATCTCGTC
ACCAAGCTAGCCACCGCACTGGAAACGAAATTGCAAGAAAAGGGAATACG
GATGTCCGCCCAAGACAAAGAGATGGATGTTGTAGGAAGTCTCTGTTCGA
AGATGCGGTTGTTGGCGCGTTGTTACCCATATCAAATTACGGGTGTTGTG
GGACGAGATATAAGGCAGGAGAATAGTGCGACCTCGTCAGCATCTGTCGT
GATGACTGCAGGCCAACAGCAGGATAGTAGTATGGGTGTTGAGGGTGAGA
TGTCTCAGGACTGGATGCCAGGTAATAGTATCTACGGCGATATGGAGGAT
ATGTTTCCCCTGGATGATATTCAGTGGGATTCGCTGTTGAGGGATTTTAC
TACGGGGTTTGGGTAGGTTCTGTGGCACACTCGGCAGGCCGATTACTATG
AAGCACGATGATCGAATAAAAGAGGCTGTTGAATGTCTAGCATCATCCAC
TACCACCGGATACGCATCAGATCGCTGGATCGCACCATTGCTCAACCTAC
AATCATTCATGGCAACAATGGATGAAATATACGCTTCGATGCAAGCAACC
GGCGGAAGTGCCCTCGTGCAAATCACGCGCGGCTCTTTACAGCGACAATT
CGATAGCATACAGACATGTATAGCAAAAGATCTCCCAAGCTGCCCTCCAT
CAACAGCCGTGTAGAGCTTCTAGAGAAGAAAGTCGACCAGCTCATGTCGC
AGCTGGCGACCCTGACCCAGCAACAGAACGGGCAGCCATTAGTATCGCCC
GCCACCTCTACGAATGACAGCCCACCCATGAACACCAATAGAGAATTGCA
CTCATCTTCCCATGAAGCCTCTACACTAGAGAACCCAACAGACACAGATA
TAGCCGCGCTGCTAGACGCAGCCAAAGACCCGTCCCACGGCCCCGATCCG
CCGACCAGCTCTGTTCTCGAGGACCGGCCATCACTCGTAGATCGGGGCCT
CTTGAGTCCAGCTGAAACCGAGCGTATGCTCACAACCTTCAAAGCTGACT
TTGTGCGCAAGTTCCCCTTTGTCTTGATTCCGCATGGAGAGACAGCCGCT
CGACTCAGAGTTCGAGAGCCGTTTCTGTTTCTGTGCATCGTGGCAGCGAC
GGTGGGCAGTGCGCATCCTCTGCGCAGGACTGTCGCTGAGGAGGTCATGA
CCCATGTTACGTCGAGGATCGTGGCACGATCGGAGAGGAGTCTTGAGTTG
CTTCGTGGATTGTTGGTTCATTGTGCGTGGTACTCGTATCCTGCCGAGAA
GTATCATCCGAGGCTTTTGCTGTTGGTTCAGCTTTGTACCTCGATTTTGT
ATGATTTGGGACTGCATAAGAGGAATAGGCTGGGTGCGGATGAGCAGCGC
GCGCTGCTGGGGACGTATTGGTTGTCTGTTGGATGAGCTCCCCCATCTCT
GCAGTCAAGAGGAGAGCATGTGTGGCATGCACCATCGCCAAGGCGAAGTG
TACGCCGCAGGCTGCCAACCTGTGCCAGCGATGCGCTCGTCTAGGCAAGT
CATGCACGTACCTTGACCTTCCGCAGACAAAGCGTAAGCAGAGGCAGAAC
GCCGCACCGAGCAACCGCAATATCCACCGAACTCAAGTACGCAGAAATGC
GTCTCGAGGAACCGTCTCTCCGCGAAGATCTATGGACAGCAGACCCCATC
AACGCCATCCGAACCAACATGCTAATGACCCTCATCCAACGAAGCAAGGA
ACTCATACAAATCATTACGAGCCTCCCCGTATCGGAGATTCCCCAGTTGA
CAATAATAACTAATGCCCGTATCTGCGCCGCAGTGGGATACATCCCCACA
GCCGTATTGACACTTCTTAATCTCATAACTAGCACCTCCCCAACAACAAA
CCAAGACCACCAAGCACAAATCCAATCCATCATCGACACAGCAGACTACC
CAAATCTCGTCACCAAGCTAGCCACCGCACTGGAAACGAAATTGCAAGAA
AAGGGAATACGGATGTCCGCCCAAGACAAAGAGATGGATGTTGTAGGAAG
TCTCTGTTCGAAGATGCGGTTGTTGGCGCGTTGTTACCCATATCAAATTA
CGGGTGTTGTGGGACGAGATATAAGGCAGGAGAATAGTGCGACCTCGTCA
GCATCTGTCGTGATGACTGCAGGCCAACAGCAGGATAGTAGTATGGGTGT
TGAGGGTGAGATGTCTCAGGACTGGATGCCAGGTAATAGTATCTACGGCG
ATATGGAGGATATGTTTCCCCTGGATGATATTCAGTGGGATTCGCTGTTG
AGGGATTTTACTACGGGGTTTGGGTAGGTTCTGTGGCACACTCGGCAGGC
CGATTACTATGAAGCACGATGATCGAATAAAAGAGGCTGTTGAATGTCTA
GCATCATCCACTACCACCGGATACGCATCAGATCGCTGGATCGCACCATT
GCTCAACCTACAATCATTCATGGCAACAATGGATGAAATATACGCTTCGA
TGCAAGCAACCGGCGGAAGTGCCCTCGTGCAAATCACGCGCGGCTCTTTA
CAGCGACAATTCGATAGCATACAGACATGTATAGCAAAAGATCTCCCAAG
CTGCCCTCCATCAACAGCCGTGTAGAGCTTCTAGAGAAGAAAGTCGACCA
GCTCATGTCGCAGCTGGCGACCCTGACCCAGCAACAGAACGGGCAGCCAT
TAGTATCGCCCGCCACCTCTACGAATGACAGCCCACCCATGAACACCAAT
AGAGAATTGCACTCATCTTCCCATGAAGCCTCTACACTAGAGAACCCAAC
AGACACAGATATAGCCGCGCTGCTAGACGCAGCCAAAGACCCGTCCCACG
GCCCCGATCCGCCGACCAGCTCTGTTCTCGAGGACCGGCCATCACTCGTA
GATCGGGGCCTCTTGAGTCCAGCTGAAACCGAGCGTATGCTCACAACCTT
CAAAGCTGACTTTGTGCGCAAGTTCCCCTTTGTCTTGATTCCGCATGGAG
AGACAGCCGCTCGACTCAGAGTTCGAGAGCCGTTTCTGTTTCTGTGCATC
GTGGCAGCGACGGTGGGCAGTGCGCATCCTCTGCGCAGGACTGTCGCTGA
GGAGGTCATGACCCATGTTACGTCGAGGATCGTGGCACGATCGGAGAGGA
GTCTTGAGTTGCTTCGTGGATTGTTGGTTCATTGTGCGTGGTACTCGTAT
CCTGCCGAGAAGTATCATCCGAGGCTTTTGCTGTTGGTTCAGCTTTGTAC
CTCGATTTTGTATGATTTGGGACTGCATAAGAGGAATAGGCTGGGTGCGG
ATGAGCAGCGCGCGCTGCTGGGGACGTATTGGTTGTCTGTTGGATGAGCT
CCCCCATCTCTGCAGTCAAGAGGAGAGCATGTGTGGCATGCACCATCGCC
AAGGCGAAGTGTACGCCGCAGGCTGCCAACCTGTGCCAGCGATGCGCTCG
TCTAGGCAAGTCATGCACGTACCTTGACCTTCCGCAGACAAAGCGTAAGC
AGAGGCAGAACGCCGCACCGAGCAACCGCAATATCCACCGAACTCAAGTA
CGCAGAAATGCGTCTCGAGGAACCGTCTCTCCGCGAAGATCTATGGACAG
CAGACCCCATCAACGCCATCCGAACCAACATGCTAATGACCCTCATCCAA
CGAAGCAAGGAACTCATACAAATCATTACGAGCCTCCCCGTATCGGAGAT
TCCCCAGTTGACAATAATAACTAATGCCCGTATCTGCGCCGCAGTGGGAT
ACATCCCCACAGCCGTATTGACACTTCTTAATCTCATAACTAGCACCTCC
CCAACAACAAACCAAGACCACCAAGCACAAATCCAATCCATCATCGACAC
AGCAGACTACCCAAATCTCGTCACCAAGCTAGCCACCGCACTGGAAACGA
AATTGCAAGAAAAGGGAATACGGATGTCCGCCCAAGACAAAGAGATGGAT
GTTGTAGGAAGTCTCTGTTCGAAGATGCGGTTGTTGGCGCGTTGTTACCC
ATATCAAATTACGGGTGTTGTGGGACGAGATATAAGGCAGGAGAATAGTG
CGACCTCGTCAGCATCTGTCGTGATGACTGCAGGCCAACAGCAGGATAGT
AGTATGGGTGTTGAGGGTGAGATGTCTCAGGACTGGATGCCAGGTAATAG
TATCTACGGCGATATGGAGGATATGTTTCCCCTGGATGATATTCAGTGGG
ATTCGCTGTTGAGGGATTTTACTACGGGGTTTGGGTAGGTTCTGTGGCAC
ACTCGGCAGGCCGATTACTATGAAGCACGATGATCGAATAAAAGAGGCTG
TTGAATGTCTAGCATCATCCACTACCACCGGATACGCATCAGATCGCTGG
ATCGCACCATTGCTCAACCTACAATCATTCATGGCAACAATGGATGAAAT
ATACGCTTCGATGCAAGCAACCGGCGGAAGTGCCCTCGTGCAAATCACGC
GCGGCTCTTTACAGCGACAATTCGATAGCATACAGACATGTATAGCAAAA
GATCTCCCAAGCTGCCCTCCATCAACAGCCGTGTAGAGCTTCTAGAGAAG
AAAGTCGACCAGCTCATGTCGCAGCTGGCGACCCTGACCCAGCAACAGAA
CGGGCAGCCATTAGTATCGCCCGCCACCTCTACGAATGACAGCCCACCCA
TGAACACCAATAGAGAATTGCACTCATCTTCCCATGAAGCCTCTACACTA
GAGAACCCAACAGACACAGATATAGCCGCGCTGCTAGACGCAGCCAAAGA
CCCGTCCCACGGCCCCGATCCGCCGACCAGCTCTGTTCTCGAGGACCGGC
CATCACTCGTAGATCGGGGCCTCTTGAGTCCAGCTGAAACCGAGCGTATG
CTCACAACCTTCAAAGCTGACTTTGTGCGCAAGTTCCCCTTTGTCTTGAT
TCCGCATGGAGAGACAGCCGCTCGACTCAGAGTTCGAGAGCCGTTTCTGT
TTCTGTGCATCGTGGCAGCGACGGTGGGCAGTGCGCATCCTCTGCGCAGG
ACTGTCGCTGAGGAGGTCATGACCCATGTTACGTCGAGGATCGTGGCACG
ATCGGAGAGGAGTCTTGAGTTGCTTCGTGGATTGTTGGTTCATTGTGCGT
GGTACTCGTATCCTGCCGAGAAGTATCATCCGAGGCTTTTGCTGTTGGTT
CAGCTTTGTACCTCGATTTTGTATGATTTGGGACTGCATAAGAGGAATAG
GCTGGGTGCGGATGAGCAGCGCGCGCTGCTGGGGACGTATTGGTTGTCTG
TTGGATGAGCTCCCCCATCTCTGCAGTCAAGAGGAGAGCATGTGTGGCAT
GCACCATCGCCAAGGCGAAGTGTACGCCGCAGGCTGCCAACCTGTGCCAG
CGATGCGCTCGTCTAGGCAAGTCATGCACGTACCTTGACCTTCCGCAGAC
AAAGCGTAAGCAGAGGCAGAACGCCGCACCGAGCAACCGCAATATCCACC
GAACTCAAGTACGCAGAAATGCGTCTCGAGGAACCGTCTCTCCGCGAAGA
TCTATGGACAGCAGACCCCATCAACGCCATCCGAACCAACATGCTAATGA
CCCTCATCCAACGAAGCAAGGAACTCATACAAATCATTACGAGCCTCCCC
GTATCGGAGATTCCCCAGTTGACAATAATAACTAATGCCCGTATCTGCGC
CGCAGTGGGATACATCCCCACAGCCGTATTGACACTTCTTAATCTCATAA
CTAGCACCTCCCCAACAACAAACCAAGACCACCAAGCACAAATCCAATCC
ATCATCGACACAGCAGACTACCCAAATCTCGTCACCAAGCTAGCCACCGC
ACTGGAAACGAAATTGCAAGAAAAGGGAATACGGATGTCCGCCCAAGACA
AAGAGATGGATGTTGTAGGAAGTCTCTGTTCGAAGATGCGGTTGTTGGCG
CGTTGTTACCCATATCAAATTACGGGTGTTGTGGGACGAGATATAAGGCA
GGAGAATAGTGCGACCTCGTCAGCATCTGTCGTGATGACTGCAGGCCAAC
AGCAGGATAGTAGTATGGGTGTTGAGGGTGAGATGTCTCAGGACTGGATG
CCAGGTAATAGTATCTACGGCGATATGGAGGATATGTTTCCCCTGGATGA
TATTCAGTGGGATTCGCTGTTGAGGGATTTTACTACGGGGTTTGGGTAGG
TTCTGTGGCACACTCGGCAGGCCGATTACTATGAAGCACGATGATCGAAT
AAAAGAGGCTGTTGAATGTCTAGCATCATCCACTACCACCGGATACGCAT
CAGATCGCTGGATCGCACCATTGCTCAACCTACAATCATTCATGGCAACA
ATGGATGAAATATACGCTTCGATGCAAGCAACCGGCGGAAGTGCCCTCGT
GCAAATCACGCGCGGCTCTTTACAGCGACAATTCGATAGCATACAGACAT
GTATAGCAAAAGATCTCCCAAGCTGCCCTCCATCAACAGCCGTGTAGAGC
TTCTAGAGAAGAAAGTCGACCAGCTCATGTCGCAGCTGGCGACCCTGACC
CAGCAACAGAACGGGCAGCCATTAGTATCGCCCGCCACCTCTACGAATGA
CAGCCCACCCATGAACACCAATAGAGAATTGCACTCATCTTCCCATGAAG
CCTCTACACTAGAGAACCCAACAGACACAGATATAGCCGCGCTGCTAGAC
GCAGCCAAAGACCCGTCCCACGGCCCCGATCCGCCGACCAGCTCTGTTCT
CGAGGACCGGCCATCACTCGTAGATCGGGGCCTCTTGAGTCCAGCTGAAA
CCGAGCGTATGCTCACAACCTTCAAAGCTGACTTTGTGCGCAAGTTCCCC
TTTGTCTTGATTCCGCATGGAGAGACAGCCGCTCGACTCAGAGTTCGAGA
GCCGTTTCTGTTTCTGTGCATCGTGGCAGCGACGGTGGGCAGTGCGCATC
CTCTGCGCAGGACTGTCGCTGAGGAGGTCATGACCCATGTTACGTCGAGG
ATCGTGGCACGATCGGAGAGGAGTCTTGAGTTGCTTCGTGGATTGTTGGT
TCATTGTGCGTGGTACTCGTATCCTGCCGAGAAGTATCATCCGAGGCTTT
TGCTGTTGGTTCAGCTTTGTACCTCGATTTTGTATGATTTGGGACTGCAT
AAGAGGAATAGGCTGGGTGCGGATGAGCAGCGCGCGCTGCTGGGGACGTA
TTGGTTGTCTGTTGGATGAGCTCCCCCATCTCTGCAGTCAAGAGGAGAGC
ATGTGTGGCATGCACCATCGCCAAGGCGAAGTGTACGCCGCAGGCTGCCA
ACCTGTGCCAGCGATGCGCTCGTCTAGGCAAGTCATGCACGTACCTTGAC
CTTCCGCAGACAAAGCGTAAGCAGAGGCAGAACGCCGCACCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010698-T1.utr3p1 | KJC3_010698-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010698-T1.utr5p1 | KJC3_010698-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4126545..4128725 - |
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