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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4144234..4145660- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010706-T1 ID=KJC3_010706-T1|Name=KJC3_010706-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1427bp|location=Sequence derived from alignment at ch7:4144234..4145660- (Aspergillus niger KJC3)
CTACGACCAAACCGCAATCATGGATTCCATAATCAAAATACCCGGAGCAT
ATCCTCGTGACTTCACCGACTACCGCTCAAGCCCCTTAATCGTGAATAAA
CTCATCAGTGGCGCATACTTCACGGAATTCGCTCCTCAGGTCACAGCCCT
GCTATCAAATTATGATGCTCGCGTGCCTCGCGAAACTGCGCGTAGCATTT
TCAACAAGCAGTCAAATACCGCCGCCATGATCCTCGGTTGTCTGAATAGA
ATTGTTGGAGGTATTCTGAACGTCACCTGCTTGCTTGTGTGCTTTGTGTA
CTCGAAATATCGTGACTTCAGGTAGTATGTCATAATTTGACTAATTGCTT
AGTTGTGCACTGCTAACATAAGTCCACTTTCCAGCACATCCCAGTCAGGA
AATATTCTGGACTATGAAACAGCCACCAGAATGCTCAGACCTATACTCCT
TTTGCTCGCATCCCACGAAGCAGCCCAGGTATACTCAATCACCACAGACG
GAGGAGTTTTAAATGGAGAAATAGCAGTGCATGCCTGGGGGCACGATTTC
GAACTCGCTCGTGATTTGAAGCGGTACGAGAACTCGCTGGCGCATGATGA
GTGCGAAGAAGATCATCTCTCCAAGACAATGGGTAGGGTTATTCGTGCCA
TGGGACACAGTCATAATAAGTTATTAGGATCCCCGGTGCTTCATATCGAA
CAGTTAACTGATCCGTCTGTGCAGGCTCACCTACATAATGGCCACAGCTG
TCCTGACCGAATGCATTTGCAACATTCTACAAGTTGGCAGCCGCTATGGA
CTGGCGGTCATGATGGCGTGTATTCTCACTGTTCTATTTGCAGCAGCGGA
AGATTACGTTGATTGCTCTACTACGCCTGTGAAAGAGCGTCGCGAGGTGA
CTCTTCGGGACTTGATGATCAGTGCATTGAAGAAGAGTAGTATTCGCTAT
GCTAAGGTTCAGAGAATGTGGACTTCTCAGAAGCGGAGTACTAGCGACTC
GGGAGTGCTGGAAAAGTACCTTATTAAGGGATTGAAGGCACCCACCACAG
GAACCGTTCACGATGTATATGTGACTCACTATAGATGTGGGATTGTCGTC
CAGCGATCTGCCCCCGAAGATGATATGGTCGCTCTCGCCAGCCCTGCTGA
GTCTTCGGATGATGTTCAAGAAGGATACAAAGTCTCCTACGGCATTCGGT
ACTTAGCGGAGGTGAACCCGCAGGATCAGCAAGCCATAGCGAAGGGGATT
GGTAGATCGTGGACATGTTTGGACCAGACCAGTACATTGATATTGACCGA
GTGTGATATTTCTGACGAGCACGCGGACTTCTACTTCGACTTTGATGCAC
GGAGCGATGATGACAATGATGACGACGAGGAGGAAGAGGGCATTGAGATC
AACGGCTCGCTAAAATGGTTTCTATAG back to topCoding sequence (CDS) from alignment at ch7:4144234..4145660- >KJC3_010706-T1 ID=KJC3_010706-T1|Name=KJC3_010706-T1|organism=Aspergillus niger KJC3|type=CDS|length=3879bp|location=Sequence derived from alignment at ch7:4144234..4145660- (Aspergillus niger KJC3)
GCTCACCTACATAATGGCCACAGCTGTCCTGACCGAATGCATTTGCAACA
TTCTACAAGTTGGCAGCCGCTATGGACTGGCGGTCATGATGGCGTGTATT
CTCACTGTTCTATTTGCAGCAGCGGAAGATTACGTTGATTGCTCTACTAC
GCCTGTGAAAGAGCGTCGCGAGGTGACTCTTCGGGACTTGATGATCAGTG
CATTGAAGAAGAGTAGTATTCGCTATGCTAAGGTTCAGAGAATGTGGACT
TCTCAGAAGCGGAGTACTAGCGACTCGGGAGTGCTGGAAAAGTACCTTAT
TAAGGGATTGAAGGCACCCACCACAGGAACCGTTCACGATGTATATGTGA
CTCACTATAGATGTGGGATTGTCGTCCAGCGATCTGCCCCCGAAGATGAT
ATGGTCGCTCTCGCCAGCCCTGCTGAGTCTTCGGATGATGTTCAAGAAGG
ATACAAAGTCTCCTACGGCATTCGGTACTTAGCGGAGGTGAACCCGCAGG
ATCAGCAAGCCATAGCGAAGGGGATTGGTAGATCGTGGACATGTTTGGAC
CAGACCAGTACATTGATATTGACCGAGTGTGATATTTCTGACGAGCACGC
GGACTTCTACTTCGACTTTGATGCACGGAGCGATGATGACAATGATGACG
ACGAGGAGGAAGAGGGCATTGAGATCAACGGCTCGCTAAAATGGTTTCTA
TAGCACATCCCAGTCAGGAAATATTCTGGACTATGAAACAGCCACCAGAA
TGCTCAGACCTATACTCCTTTTGCTCGCATCCCACGAAGCAGCCCAGGTA
TACTCAATCACCACAGACGGAGGAGTTTTAAATGGAGAAATAGCAGTGCA
TGCCTGGGGGCACGATTTCGAACTCGCTCGTGATTTGAAGCGGTACGAGA
ACTCGCTGGCGCATGATGAGTGCGAAGAAGATCATCTCTCCAAGACAATG
GGTAGGGTTATTCGTGCCATGGGACACAGTCATAATAAATGGATTCCATA
ATCAAAATACCCGGAGCATATCCTCGTGACTTCACCGACTACCGCTCAAG
CCCCTTAATCGTGAATAAACTCATCAGTGGCGCATACTTCACGGAATTCG
CTCCTCAGGTCACAGCCCTGCTATCAAATTATGATGCTCGCGTGCCTCGC
GAAACTGCGCGTAGCATTTTCAACAAGCAGTCAAATACCGCCGCCATGAT
CCTCGGTTGTCTGAATAGAATTGTTGGAGGTATTCTGAACGTCACCTGCT
TGCTTGTGTGCTTTGTGTACTCGAAATATCGTGACTTCAGGTAGCTCACC
TACATAATGGCCACAGCTGTCCTGACCGAATGCATTTGCAACATTCTACA
AGTTGGCAGCCGCTATGGACTGGCGGTCATGATGGCGTGTATTCTCACTG
TTCTATTTGCAGCAGCGGAAGATTACGTTGATTGCTCTACTACGCCTGTG
AAAGAGCGTCGCGAGGTGACTCTTCGGGACTTGATGATCAGTGCATTGAA
GAAGAGTAGTATTCGCTATGCTAAGGTTCAGAGAATGTGGACTTCTCAGA
AGCGGAGTACTAGCGACTCGGGAGTGCTGGAAAAGTACCTTATTAAGGGA
TTGAAGGCACCCACCACAGGAACCGTTCACGATGTATATGTGACTCACTA
TAGATGTGGGATTGTCGTCCAGCGATCTGCCCCCGAAGATGATATGGTCG
CTCTCGCCAGCCCTGCTGAGTCTTCGGATGATGTTCAAGAAGGATACAAA
GTCTCCTACGGCATTCGGTACTTAGCGGAGGTGAACCCGCAGGATCAGCA
AGCCATAGCGAAGGGGATTGGTAGATCGTGGACATGTTTGGACCAGACCA
GTACATTGATATTGACCGAGTGTGATATTTCTGACGAGCACGCGGACTTC
TACTTCGACTTTGATGCACGGAGCGATGATGACAATGATGACGACGAGGA
GGAAGAGGGCATTGAGATCAACGGCTCGCTAAAATGGTTTCTATAGCACA
TCCCAGTCAGGAAATATTCTGGACTATGAAACAGCCACCAGAATGCTCAG
ACCTATACTCCTTTTGCTCGCATCCCACGAAGCAGCCCAGGTATACTCAA
TCACCACAGACGGAGGAGTTTTAAATGGAGAAATAGCAGTGCATGCCTGG
GGGCACGATTTCGAACTCGCTCGTGATTTGAAGCGGTACGAGAACTCGCT
GGCGCATGATGAGTGCGAAGAAGATCATCTCTCCAAGACAATGGGTAGGG
TTATTCGTGCCATGGGACACAGTCATAATAAATGGATTCCATAATCAAAA
TACCCGGAGCATATCCTCGTGACTTCACCGACTACCGCTCAAGCCCCTTA
ATCGTGAATAAACTCATCAGTGGCGCATACTTCACGGAATTCGCTCCTCA
GGTCACAGCCCTGCTATCAAATTATGATGCTCGCGTGCCTCGCGAAACTG
CGCGTAGCATTTTCAACAAGCAGTCAAATACCGCCGCCATGATCCTCGGT
TGTCTGAATAGAATTGTTGGAGGTATTCTGAACGTCACCTGCTTGCTTGT
GTGCTTTGTGTACTCGAAATATCGTGACTTCAGGTAGCTCACCTACATAA
TGGCCACAGCTGTCCTGACCGAATGCATTTGCAACATTCTACAAGTTGGC
AGCCGCTATGGACTGGCGGTCATGATGGCGTGTATTCTCACTGTTCTATT
TGCAGCAGCGGAAGATTACGTTGATTGCTCTACTACGCCTGTGAAAGAGC
GTCGCGAGGTGACTCTTCGGGACTTGATGATCAGTGCATTGAAGAAGAGT
AGTATTCGCTATGCTAAGGTTCAGAGAATGTGGACTTCTCAGAAGCGGAG
TACTAGCGACTCGGGAGTGCTGGAAAAGTACCTTATTAAGGGATTGAAGG
CACCCACCACAGGAACCGTTCACGATGTATATGTGACTCACTATAGATGT
GGGATTGTCGTCCAGCGATCTGCCCCCGAAGATGATATGGTCGCTCTCGC
CAGCCCTGCTGAGTCTTCGGATGATGTTCAAGAAGGATACAAAGTCTCCT
ACGGCATTCGGTACTTAGCGGAGGTGAACCCGCAGGATCAGCAAGCCATA
GCGAAGGGGATTGGTAGATCGTGGACATGTTTGGACCAGACCAGTACATT
GATATTGACCGAGTGTGATATTTCTGACGAGCACGCGGACTTCTACTTCG
ACTTTGATGCACGGAGCGATGATGACAATGATGACGACGAGGAGGAAGAG
GGCATTGAGATCAACGGCTCGCTAAAATGGTTTCTATAGCACATCCCAGT
CAGGAAATATTCTGGACTATGAAACAGCCACCAGAATGCTCAGACCTATA
CTCCTTTTGCTCGCATCCCACGAAGCAGCCCAGGTATACTCAATCACCAC
AGACGGAGGAGTTTTAAATGGAGAAATAGCAGTGCATGCCTGGGGGCACG
ATTTCGAACTCGCTCGTGATTTGAAGCGGTACGAGAACTCGCTGGCGCAT
GATGAGTGCGAAGAAGATCATCTCTCCAAGACAATGGGTAGGGTTATTCG
TGCCATGGGACACAGTCATAATAAATGGATTCCATAATCAAAATACCCGG
AGCATATCCTCGTGACTTCACCGACTACCGCTCAAGCCCCTTAATCGTGA
ATAAACTCATCAGTGGCGCATACTTCACGGAATTCGCTCCTCAGGTCACA
GCCCTGCTATCAAATTATGATGCTCGCGTGCCTCGCGAAACTGCGCGTAG
CATTTTCAACAAGCAGTCAAATACCGCCGCCATGATCCTCGGTTGTCTGA
ATAGAATTGTTGGAGGTATTCTGAACGTCACCTGCTTGCTTGTGTGCTTT
GTGTACTCGAAATATCGTGACTTCAGGTA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010706-T1.utr5p1 | KJC3_010706-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4144234..4145660 - |
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