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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4189965..4191157- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010723-T1 ID=KJC3_010723-T1|Name=KJC3_010723-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1193bp|location=Sequence derived from alignment at ch7:4189965..4191157- (Aspergillus niger KJC3)
TGATAGTCTAATTAGTTTGTGATGAGAACCTAATCACATTCAGTCTAATC
TAGACCTACCACCTAGGCTATTTACATATAAGATAACATACACACCTTCA
TCTTCCTATTCACTACACCACCACACCACCTATCGAACAGTTCTCCAAGC
ACCCAATATGACCGACCCCAACAAAGGCACCAAAATCACCCTCTACTGGT
ACCAATACCCCCTCCCATCCCATTTCCCCCTAAACACCTATACTAAAAAA
ATGTGAATAAAACAGGCTCTCCCAATCCCGCTCTCACCGCATCCTCTGGC
TCCTCGAAGCCCTGCACCTCAACTACGAGCTAAAGATCTACCACCGCGGA
CCCGACAAGCTCGCGCCCCCGGAACTGAAAGAGATCCATCCGTTAGGAAA
GTCGCCTCTCCTGACTATCCAGCCCGCGAATGCCACTCCAGACCAGAAGC
CCATTGTGCTGGCTGAATCGGGTATTATCATCGAGTACCTGCTCGATCAC
TTCGGCTCCAATGCAGAGAAACCTCTCCTCCCGCCCCGGTGGAAAGATAC
CCAAGATGGTGTAGTTGGCGGAGAAACAGAGGAATGGATGCGCTATCGGT
ACTTCATGCACTATGCTGAGGGCAGTCTCATGCCGTTTTTGGTCATGCAG
TTGGTTATGGATAGTATGTTTCCCATGACCCATACCAGATCTATGTAATG
TGTGTGTGTGTGCTAATGATGATGACAGCGGTGAAAAACCCCCCTGGAAT
GCCCTTCTTCGTCAAGCCTCTCCCGCGCCTCGTCGCGGGCCAGGTCGAGA
AGGCGTTCCTGGCGCGAAACATCCAGTCGCACTTGGAGTTCCTGGAAGAT
CAGCTGCGGAGTAGTCCTAATGGGGGTGCCTATCTCTGCGGGACGGAGTT
GACGGCCGCGGACATTATGATGAGTTTCCCGGTGATTGCTATGTCCGGGA
GGTTGGAGGAGCAGTTGGACAAGTTTCCGCTGCTGAAGGGGTATGCGGAT
AGATTGGAGAAGGAGGAGGGATATATTAGGGCTGTGAAGAAGGTGGAGGA
GGTGGATGGGAAGTTTGAGGCTTCCCTGTGATTTCTCACCTTTTCTATTT
GTGAGAGTTTGATGTGATTGGGATCGGGGGTAATGTTATATATGATAATG
GTACTAGTGTAGTAACTAATTATGCAATCTATCTATCTGTATT back to topCoding sequence (CDS) from alignment at ch7:4189965..4191157- >KJC3_010723-T1 ID=KJC3_010723-T1|Name=KJC3_010723-T1|organism=Aspergillus niger KJC3|type=CDS|length=2376bp|location=Sequence derived from alignment at ch7:4189965..4191157- (Aspergillus niger KJC3)
CGGTGAAAAACCCCCCTGGAATGCCCTTCTTCGTCAAGCCTCTCCCGCGC
CTCGTCGCGGGCCAGGTCGAGAAGGCGTTCCTGGCGCGAAACATCCAGTC
GCACTTGGAGTTCCTGGAAGATCAGCTGCGGAGTAGTCCTAATGGGGGTG
CCTATCTCTGCGGGACGGAGTTGACGGCCGCGGACATTATGATGAGTTTC
CCGGTGATTGCTATGTCCGGGAGGTTGGAGGAGCAGTTGGACAAGTTTCC
GCTGCTGAAGGGGTATGCGGATAGATTGGAGAAGGAGGAGGGATATATTA
GGGCTGTGAAGAAGGTGGAGGAGGTGGATGGGAAGTTTGAGGCTTCCCTG
TGAGCTCTCCCAATCCCGCTCTCACCGCATCCTCTGGCTCCTCGAAGCCC
TGCACCTCAACTACGAGCTAAAGATCTACCACCGCGGACCCGACAAGCTC
GCGCCCCCGGAACTGAAAGAGATCCATCCGTTAGGAAAGTCGCCTCTCCT
GACTATCCAGCCCGCGAATGCCACTCCAGACCAGAAGCCCATTGTGCTGG
CTGAATCGGGTATTATCATCGAGTACCTGCTCGATCACTTCGGCTCCAAT
GCAGAGAAACCTCTCCTCCCGCCCCGGTGGAAAGATACCCAAGATGGTGT
AGTTGGCGGAGAAACAGAGGAATGGATGCGCTATCGGTACTTCATGCACT
ATGCTGAGGGCAGTCTCATGCCGTTTTTGGTCATGCAGTTGGTTATGGAT
AATGACCGACCCCAACAAAGGCACCAAAATCACCCTCTACTGCGGTGAAA
AACCCCCCTGGAATGCCCTTCTTCGTCAAGCCTCTCCCGCGCCTCGTCGC
GGGCCAGGTCGAGAAGGCGTTCCTGGCGCGAAACATCCAGTCGCACTTGG
AGTTCCTGGAAGATCAGCTGCGGAGTAGTCCTAATGGGGGTGCCTATCTC
TGCGGGACGGAGTTGACGGCCGCGGACATTATGATGAGTTTCCCGGTGAT
TGCTATGTCCGGGAGGTTGGAGGAGCAGTTGGACAAGTTTCCGCTGCTGA
AGGGGTATGCGGATAGATTGGAGAAGGAGGAGGGATATATTAGGGCTGTG
AAGAAGGTGGAGGAGGTGGATGGGAAGTTTGAGGCTTCCCTGTGAGCTCT
CCCAATCCCGCTCTCACCGCATCCTCTGGCTCCTCGAAGCCCTGCACCTC
AACTACGAGCTAAAGATCTACCACCGCGGACCCGACAAGCTCGCGCCCCC
GGAACTGAAAGAGATCCATCCGTTAGGAAAGTCGCCTCTCCTGACTATCC
AGCCCGCGAATGCCACTCCAGACCAGAAGCCCATTGTGCTGGCTGAATCG
GGTATTATCATCGAGTACCTGCTCGATCACTTCGGCTCCAATGCAGAGAA
ACCTCTCCTCCCGCCCCGGTGGAAAGATACCCAAGATGGTGTAGTTGGCG
GAGAAACAGAGGAATGGATGCGCTATCGGTACTTCATGCACTATGCTGAG
GGCAGTCTCATGCCGTTTTTGGTCATGCAGTTGGTTATGGATAATGACCG
ACCCCAACAAAGGCACCAAAATCACCCTCTACTGCGGTGAAAAACCCCCC
TGGAATGCCCTTCTTCGTCAAGCCTCTCCCGCGCCTCGTCGCGGGCCAGG
TCGAGAAGGCGTTCCTGGCGCGAAACATCCAGTCGCACTTGGAGTTCCTG
GAAGATCAGCTGCGGAGTAGTCCTAATGGGGGTGCCTATCTCTGCGGGAC
GGAGTTGACGGCCGCGGACATTATGATGAGTTTCCCGGTGATTGCTATGT
CCGGGAGGTTGGAGGAGCAGTTGGACAAGTTTCCGCTGCTGAAGGGGTAT
GCGGATAGATTGGAGAAGGAGGAGGGATATATTAGGGCTGTGAAGAAGGT
GGAGGAGGTGGATGGGAAGTTTGAGGCTTCCCTGTGAGCTCTCCCAATCC
CGCTCTCACCGCATCCTCTGGCTCCTCGAAGCCCTGCACCTCAACTACGA
GCTAAAGATCTACCACCGCGGACCCGACAAGCTCGCGCCCCCGGAACTGA
AAGAGATCCATCCGTTAGGAAAGTCGCCTCTCCTGACTATCCAGCCCGCG
AATGCCACTCCAGACCAGAAGCCCATTGTGCTGGCTGAATCGGGTATTAT
CATCGAGTACCTGCTCGATCACTTCGGCTCCAATGCAGAGAAACCTCTCC
TCCCGCCCCGGTGGAAAGATACCCAAGATGGTGTAGTTGGCGGAGAAACA
GAGGAATGGATGCGCTATCGGTACTTCATGCACTATGCTGAGGGCAGTCT
CATGCCGTTTTTGGTCATGCAGTTGGTTATGGATAATGACCGACCCCAAC
AAAGGCACCAAAATCACCCTCTACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010723-T1.utr3p1 | KJC3_010723-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010723-T1.utr5p1 | KJC3_010723-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036282 |
| DBxref | InterPro:IPR010987 |
| DBxref | InterPro:IPR040079 |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR004046 |
| DBxref | InterPro:IPR004045 |
| DBxref | PFAM:PF13417 |
| DBxref | PFAM:PF13409 |
| DBxref | PFAM:PF02798 |
| DBxref | PFAM:PF14497 |
| DBxref | PFAM:PF13410 |
| DBxref | PFAM:PF00043 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4189965..4191157 - |
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