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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4278338..4280078+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010759-T1 ID=KJC3_010759-T1|Name=KJC3_010759-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1741bp|location=Sequence derived from alignment at ch7:4278338..4280078+ (Aspergillus niger KJC3)
CAAATCACTCTTTGGCCATTGGGCATCAGTATCCTGCCTTTCTTTCAGCC
ATAACCACAATCATTTGCAATCATTTGTTACAAGGCATAGCCAACTCAGT
CCGCATCGACTGTTAAATATAAAGAGAAGGACAGTTAGGCCGTCGTTCTT
TGACTATGAATGAGCGTTCCTTTCACTATCCCGACCCATAAGAGTTACCA
CCTGCAAGCACCTTTCGAGTTCTTTTCCCCCTTTCCACGCCTCACCGTTG
TTCCATACCAGCAGAGAAGCAGTAGCTTTAGTGCAGCATCAGATTCCAAG
TATACAATAAGAAGCACATTTGGATCGTGTCTTGCCTAGTCCTTACTCAG
CCTCTTATCTGAATGGCCTCTCTCTCCCTTCAAAAAGATCGGAGATAATG
TCGCCGCGCACGCCAGGGAAAGCCTCCCGCCCAGGGGCCGCCAGAAGGCG
GCGTGGGAGACGGAAGTTAACCCCGAGATCGCCCCTGTCTCTCCTGGCCC
AGACTCGCAAAAATAGCGTCGTGAAGAAACGTGATCGCGGCGACGTGGTC
AGCAGCACCAAGACTAAACTTACGGAGCGCAGGAGTAAACCAGGGAGATC
ATCCAGACTGAATCTCCTTCCACTGTCGACCGAGCCAAGAGAAAAGGTGA
GTGATGACAAAAACCGAGAGACCTGCTTCGGGTTTCTCTTCTGCCCTTGA
TAGTTATCAGTGGTTGTCGGTGTTGTAGCAGGGATCCCGATCACCCAGCC
TTGATCCTTGCATTGCCTGCATATCCTAGCGCCAACTCGGGATACCAATC
ACTACATACATACTGACACCCGACCCGTGAACAGAACTGTTTTAGACGGG
ATGTATCCCCTGCAAACTACCGATTCGTCCCCAAGGGCAACATCTACATT
ACTCGCAATTGCCGAAAACTGACAAAGGAGTCTGGCCGGGTTGTCTACGT
GGTTTATGTGAGGATACAAACCCAAATCATTCCAGTATTAGCAACTTCTT
TGTACCCAGTCCCTAACCCCTTCACAGGACGATAGAGGCAAGAACACTCT
TGGCCTACGTGTTCCAGTCGATATTCACGAAGCCGTCCTCCGATTAGCGG
ACGAAACGGCTCACTCTCGCGCTCAAGCTATTCAAGTACGTGACGAGAAA
GATTCGGCGCAAGCCCGTCAGCTCTTACGCGCCCAGTTTCCCTTGATGCC
TGATGAGTCACTGGACACTATCTTAGAACATGCCTTTCTCAAGGGCTCTG
GTCGCGTGGGCCGGACATCCAGGTTATCAGATGAAGACAAAGCCAAGTTG
GCCGTAGAGGCTCACATCAGACACACCCATACCAGCTACGAAGCACTCCT
GAAGGCTGGGAAGACGCGCGGTGAAGCTCGTCAAGCGTCTAAGGAGATGG
TTCAGGCTATCAGGACCGCATGGGCAGGTGGCAATGTAGAGCCAACGGAT
TGTTTGACTATGCGCGATCGAGTGATTGTGATTGATTAAACCCTTGTTGG
CGGGTCAACCGACACAACAACGTTCAAACGAAAGCGATGCCCTATTACTG
TTCATTTCTGGTATGTTGGAGACAGTACACAGATTGCATAAGGGTTAACA
TTACATATGTGTGAGGTCGCAACACCTCCACGATTACGGCGTTTTGCTCT
TTTTACTTTGGCATTGATGCACAGCGTGATGACTACGAAGCATTCATGAT
TAGATTAAGCATAGAGCTTAGACACTCACGTTAATATTGAA back to topCoding sequence (CDS) from alignment at ch7:4278338..4280078+ >KJC3_010759-T1 ID=KJC3_010759-T1|Name=KJC3_010759-T1|organism=Aspergillus niger KJC3|type=CDS|length=2502bp|location=Sequence derived from alignment at ch7:4278338..4280078+ (Aspergillus niger KJC3)
ATGTCGCCGCGCACGCCAGGGAAAGCCTCCCGCCCAGGGGCCGCCAGAAG
GCGGCGTGGGAGACGGAAGTTAACCCCGAGATCGCCCCTGTCTCTCCTGG
CCCAGACTCGCAAAAATAGCGTCGTGAAGAAACGTGATCGCGGCGACGTG
GTCAGCAGCACCAAGACTAAACTTACGGAGCGCAGGAGTAAACCAGGGAG
ATCATCCAGACTGAATCTCCTTCCACTGTCGACCGAGCCAAGAGAAAAGA
ACTGTTTTAGACGGGATGTATCCCCTGCAAACTACCGATTCGTCCCCAAG
GGCAACATCTACATTACTCGCAATTGCCGAAAACTGACAAAGGAGTCTGG
CCGGGTTGTCTACGTGGTTTATGACGATAGAGGCAAGAACACTCTTGGCC
TACGTGTTCCAGTCGATATTCACGAAGCCGTCCTCCGATTAGCGGACGAA
ACGGCTCACTCTCGCGCTCAAGCTATTCAAGTACGTGACGAGAAAGATTC
GGCGCAAGCCCGTCAGCTCTTACGCGCCCAGTTTCCCTTGATGCCTGATG
AGTCACTGGACACTATCTTAGAACATGCCTTTCTCAAGGGCTCTGGTCGC
GTGGGCCGGACATCCAGGTTATCAGATGAAGACAAAGCCAAGTTGGCCGT
AGAGGCTCACATCAGACACACCCATACCAGCTACGAAGCACTCCTGAAGG
CTGGGAAGACGCGCGGTGAAGCTCGTCAAGCGTCTAAGGAGATGGTTCAG
GCTATCAGGACCGCATGGGCAGGTGGCAATGTAGAGCCAACGGATTGTTT
GACTATGCGCGATCGAGTGATTGTGATTGATTAAATGTCGCCGCGCACGC
CAGGGAAAGCCTCCCGCCCAGGGGCCGCCAGAAGGCGGCGTGGGAGACGG
AAGTTAACCCCGAGATCGCCCCTGTCTCTCCTGGCCCAGACTCGCAAAAA
TAGCGTCGTGAAGAAACGTGATCGCGGCGACGTGGTCAGCAGCACCAAGA
CTAAACTTACGGAGCGCAGGAGTAAACCAGGGAGATCATCCAGACTGAAT
CTCCTTCCACTGTCGACCGAGCCAAGAGAAAAGAACTGTTTTAGACGGGA
TGTATCCCCTGCAAACTACCGATTCGTCCCCAAGGGCAACATCTACATTA
CTCGCAATTGCCGAAAACTGACAAAGGAGTCTGGCCGGGTTGTCTACGTG
GTTTATGACGATAGAGGCAAGAACACTCTTGGCCTACGTGTTCCAGTCGA
TATTCACGAAGCCGTCCTCCGATTAGCGGACGAAACGGCTCACTCTCGCG
CTCAAGCTATTCAAGTACGTGACGAGAAAGATTCGGCGCAAGCCCGTCAG
CTCTTACGCGCCCAGTTTCCCTTGATGCCTGATGAGTCACTGGACACTAT
CTTAGAACATGCCTTTCTCAAGGGCTCTGGTCGCGTGGGCCGGACATCCA
GGTTATCAGATGAAGACAAAGCCAAGTTGGCCGTAGAGGCTCACATCAGA
CACACCCATACCAGCTACGAAGCACTCCTGAAGGCTGGGAAGACGCGCGG
TGAAGCTCGTCAAGCGTCTAAGGAGATGGTTCAGGCTATCAGGACCGCAT
GGGCAGGTGGCAATGTAGAGCCAACGGATTGTTTGACTATGCGCGATCGA
GTGATTGTGATTGATTAAATGTCGCCGCGCACGCCAGGGAAAGCCTCCCG
CCCAGGGGCCGCCAGAAGGCGGCGTGGGAGACGGAAGTTAACCCCGAGAT
CGCCCCTGTCTCTCCTGGCCCAGACTCGCAAAAATAGCGTCGTGAAGAAA
CGTGATCGCGGCGACGTGGTCAGCAGCACCAAGACTAAACTTACGGAGCG
CAGGAGTAAACCAGGGAGATCATCCAGACTGAATCTCCTTCCACTGTCGA
CCGAGCCAAGAGAAAAGAACTGTTTTAGACGGGATGTATCCCCTGCAAAC
TACCGATTCGTCCCCAAGGGCAACATCTACATTACTCGCAATTGCCGAAA
ACTGACAAAGGAGTCTGGCCGGGTTGTCTACGTGGTTTATGACGATAGAG
GCAAGAACACTCTTGGCCTACGTGTTCCAGTCGATATTCACGAAGCCGTC
CTCCGATTAGCGGACGAAACGGCTCACTCTCGCGCTCAAGCTATTCAAGT
ACGTGACGAGAAAGATTCGGCGCAAGCCCGTCAGCTCTTACGCGCCCAGT
TTCCCTTGATGCCTGATGAGTCACTGGACACTATCTTAGAACATGCCTTT
CTCAAGGGCTCTGGTCGCGTGGGCCGGACATCCAGGTTATCAGATGAAGA
CAAAGCCAAGTTGGCCGTAGAGGCTCACATCAGACACACCCATACCAGCT
ACGAAGCACTCCTGAAGGCTGGGAAGACGCGCGGTGAAGCTCGTCAAGCG
TCTAAGGAGATGGTTCAGGCTATCAGGACCGCATGGGCAGGTGGCAATGT
AGAGCCAACGGATTGTTTGACTATGCGCGATCGAGTGATTGTGATTGATT
AA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010759-T1.utr5p1 | KJC3_010759-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010759-T1.utr3p1 | KJC3_010759-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018744 |
| DBxref | PFAM:PF10056 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4278338..4280078 + |
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