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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4358429..4360184- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010778-T1 ID=KJC3_010778-T1|Name=KJC3_010778-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1756bp|location=Sequence derived from alignment at ch7:4358429..4360184- (Aspergillus niger KJC3)
CACTTTTCCACTTCAGCAACAGAACTATACTTCACAGCTATCTATCAAAA
TGCCACCAGATATGGCCTCTCCCTCTGCCGAAATTGACTTGGACGACGAG
CAGTATGACTCTGCCGAAGACGAAGACTTTCAGCTCGACGCAGCCCAAGA
TGACGCGGACTCGGGCATGTCCGATTCCGACGAAGAGGAGGCCGCCGACG
AGCCAGCGTCTAAGCGGCGGAAGAAGGATACCAAGGATGCGCAAGGAGCC
GGTGATGACGACGAGCTGGCTTCTGGGGATGAGGCGATGATCCAGAAGGC
GAAGAATAAGAAGAGGAAGAAGGGAGAAGACGGGGATGTGGATCTTGATG
ATGAGGAAGGAGGAACGGGAGGTTTTGTGCGGACGCGCGCGATGAAGATG
CGAATGTACGTGATTATATACATTTGTCTGACTGTCTACTAGATACATTT
GTACTGACACAATACTATCGCAGTGGAGAGGAGCGCAAACCTCTCGCGAA
GATCGACGGCGCTACAGTTGACGTGGACGCGTTATGGGCGAAGATGAACG
CTCCAGACTCAGGAGTAGATGCTTCTTCAGCGCAGGATGAGAGCAAGGAA
GCTACGCCTGCGGCTGGCCAGACCGACGGGGAAACGGCAGGTGGTGACGA
GGCGACCCCCTCCGCACAGGAGCCCCAGACGAAGTATACCGAAGAGATGG
TGAAGATCAAGCGCACATACAAGTTTGCAGGAGAGATGATTACGGAAGAG
AAGATTGTGCCCAAGGATTCAGCGGAAGCTAAGCTATTCCTGGCGGGCGA
GAAGGATGCGGAGACCGTGACTGCTGCAGATGTAGACAACGCAGCGAATG
CTAAAGACGCCCTCAAACTGCGCAGACCGCTTCGACGACCTTCCCGCTTC
GATCCGAATCCCACCGGTTCGATCAAGAAGAGCTGGGAGAAACAGCCCGT
TACAGAGGCGACGGCTGGACAGGAGAACGCCCGGGGACCAAAGATCAACA
CGGTCGAGAAGTCGCGTCTGGACTGGGCTGCGTATGTGGACCAGGCTGGA
ATCAAGGACGAGCTCAACGTGCACAGCAAAGCGAAGGAGGGATTCCTGGG
TCGCATGGATTTCTTGGACCGCGTGGGGGCCAAGATAGACGAGGAGAGGA
GAAATGCTCGTCTGAAGGGGCTTTAAACTGGCTTAAACTTCAGTCCCTCT
ATTCCTTTGGCTTATTGACTCGCCTCTCGGTTCCTCGCCAAATCCTTCTC
CGAATTTCCTCACATGCAGGTGCGGAGTAATGCCAGGGATCTTCAGCACT
GGTTCCCTTGTGTCCACGCCTCGACTTCTCGACTTGGCACGTTTCCCAGT
CTGCAAGCCCGGCTGGCTACACGCCTCAAACAGCACGGGATACCCATGCG
GTGTGATATTAACTACCATCCATAGCTGGGGGTAGCACCGGACACGTGCC
TACGGCTTGATCCACCGGGCCATACTCATCTCCGCACTACGCGGTTCGCT
TACGCGGATGAATGCCACTGGTTGGATGGGCGTATTTACCTATGCATCGA
ACTAGCATGGCTGGCATAAGTGCCAGCTAAAGCGATATTATGACTTATGA
CATGTGAATTAGTGGGGATGTACGATATTGTTAGGATGGAAATACCTGTT
GATCCAATAGAGTGATATTGGTTGCACGCGCTGTATAGCTAGCTACATAG
TACCTTTTGATTAATTTCTCTACCTAATAAAAGGACTTAGGAAGGAAGAA
ATGGAG back to topCoding sequence (CDS) from alignment at ch7:4358429..4360184- >KJC3_010778-T1 ID=KJC3_010778-T1|Name=KJC3_010778-T1|organism=Aspergillus niger KJC3|type=CDS|length=2118bp|location=Sequence derived from alignment at ch7:4358429..4360184- (Aspergillus niger KJC3)
TGGAGAGGAGCGCAAACCTCTCGCGAAGATCGACGGCGCTACAGTTGACG
TGGACGCGTTATGGGCGAAGATGAACGCTCCAGACTCAGGAGTAGATGCT
TCTTCAGCGCAGGATGAGAGCAAGGAAGCTACGCCTGCGGCTGGCCAGAC
CGACGGGGAAACGGCAGGTGGTGACGAGGCGACCCCCTCCGCACAGGAGC
CCCAGACGAAGTATACCGAAGAGATGGTGAAGATCAAGCGCACATACAAG
TTTGCAGGAGAGATGATTACGGAAGAGAAGATTGTGCCCAAGGATTCAGC
GGAAGCTAAGCTATTCCTGGCGGGCGAGAAGGATGCGGAGACCGTGACTG
CTGCAGATGTAGACAACGCAGCGAATGCTAAAGACGCCCTCAAACTGCGC
AGACCGCTTCGACGACCTTCCCGCTTCGATCCGAATCCCACCGGTTCGAT
CAAGAAGAGCTGGGAGAAACAGCCCGTTACAGAGGCGACGGCTGGACAGG
AGAACGCCCGGGGACCAAAGATCAACACGGTCGAGAAGTCGCGTCTGGAC
TGGGCTGCGTATGTGGACCAGGCTGGAATCAAGGACGAGCTCAACGTGCA
CAGCAAAGCGAAGGAGGGATTCCTGGGTCGCATGGATTTCTTGGACCGCG
TGGGGGCCAAGATAGACGAGGAGAGGAGAAATGCTCGTCTGAAGGGGCTT
TAAATGCCACCAGATATGGCCTCTCCCTCTGCCGAAATTGACTTGGACGA
CGAGCAGTATGACTCTGCCGAAGACGAAGACTTTCAGCTCGACGCAGCCC
AAGATGACGCGGACTCGGGCATGTCCGATTCCGACGAAGAGGAGGCCGCC
GACGAGCCAGCGTCTAAGCGGCGGAAGAAGGATACCAAGGATGCGCAAGG
AGCCGGTGATGACGACGAGCTGGCTTCTGGGGATGAGGCGATGATCCAGA
AGGCGAAGAATAAGAAGAGGAAGAAGGGAGAAGACGGGGATGTGGATCTT
GATGATGAGGAAGGAGGAACGGGAGGTTTTGTGCGGACGCGCGCGATGAA
GATGCGAATTGGAGAGGAGCGCAAACCTCTCGCGAAGATCGACGGCGCTA
CAGTTGACGTGGACGCGTTATGGGCGAAGATGAACGCTCCAGACTCAGGA
GTAGATGCTTCTTCAGCGCAGGATGAGAGCAAGGAAGCTACGCCTGCGGC
TGGCCAGACCGACGGGGAAACGGCAGGTGGTGACGAGGCGACCCCCTCCG
CACAGGAGCCCCAGACGAAGTATACCGAAGAGATGGTGAAGATCAAGCGC
ACATACAAGTTTGCAGGAGAGATGATTACGGAAGAGAAGATTGTGCCCAA
GGATTCAGCGGAAGCTAAGCTATTCCTGGCGGGCGAGAAGGATGCGGAGA
CCGTGACTGCTGCAGATGTAGACAACGCAGCGAATGCTAAAGACGCCCTC
AAACTGCGCAGACCGCTTCGACGACCTTCCCGCTTCGATCCGAATCCCAC
CGGTTCGATCAAGAAGAGCTGGGAGAAACAGCCCGTTACAGAGGCGACGG
CTGGACAGGAGAACGCCCGGGGACCAAAGATCAACACGGTCGAGAAGTCG
CGTCTGGACTGGGCTGCGTATGTGGACCAGGCTGGAATCAAGGACGAGCT
CAACGTGCACAGCAAAGCGAAGGAGGGATTCCTGGGTCGCATGGATTTCT
TGGACCGCGTGGGGGCCAAGATAGACGAGGAGAGGAGAAATGCTCGTCTG
AAGGGGCTTTAAATGCCACCAGATATGGCCTCTCCCTCTGCCGAAATTGA
CTTGGACGACGAGCAGTATGACTCTGCCGAAGACGAAGACTTTCAGCTCG
ACGCAGCCCAAGATGACGCGGACTCGGGCATGTCCGATTCCGACGAAGAG
GAGGCCGCCGACGAGCCAGCGTCTAAGCGGCGGAAGAAGGATACCAAGGA
TGCGCAAGGAGCCGGTGATGACGACGAGCTGGCTTCTGGGGATGAGGCGA
TGATCCAGAAGGCGAAGAATAAGAAGAGGAAGAAGGGAGAAGACGGGGAT
GTGGATCTTGATGATGAGGAAGGAGGAACGGGAGGTTTTGTGCGGACGCG
CGCGATGAAGATGCGAAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010778-T1.utr3p1 | KJC3_010778-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010778-T1.utr5p1 | KJC3_010778-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011421 |
| DBxref | PFAM:PF07572 |
| Product | swr complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4358429..4360184 - |
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