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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4374109..4375037+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010789-T1 ID=KJC3_010789-T1|Name=KJC3_010789-T1|organism=Aspergillus niger KJC3|type=mRNA|length=929bp|location=Sequence derived from alignment at ch7:4374109..4375037+ (Aspergillus niger KJC3)
CACCTGACCACGCGTCACGGACCGCGCTCCGCGCAAGAAGATCAAATCCC
CGCGACGAGACGCCTTATCATCATCAATTAACCACCAAAGAAGGGCCCTC
AATACAAACAACCAACACACCATGCCCCCCGAGCGAAAACCCGCGCAAAA
GCGCAGACAACTCCCCTTCAAACCACCAAGCCGAACCTCCTCCACCGCCG
CCCCAGCATCATCATCATCAACCGCCGCAGCAACCACCAGCAAATCCAAA
GCCAAACCAGCCGAGAAGCCCAAAACCAAAGCCACAACTAAACCAACAAC
CAAACAAGCTCCTAAACCAGCAAAAGCCTCCTCATCCAAATCCGCACGCC
CCCGACCATCATCACCCAGCCCTGCTGACTCCGAAGAAGACAGCGACAAC
GATAACGCCTCTTCGTCCTCCGCCCGCTCGGACGCATCATCGCCGGAACC
AGAACCAGAACCGGACTATATCCTTGCGGAGATCATTCACAAGGATCAGC
CATCTGATGATGTGCTCACGAACGATCCTGTCATTCCGCCGAAGTTGTTG
ACAAGGCTACTGCATCATCATTTTCAGAATGAGAAGACCAAGATCGCGAA
GGATGCGAATACGGTTGTCGCAAAGTATGTGGATGTTTTTGTAAGAGAGG
CGTTGGCGAGGGCGGCGTTTGAGAGGAGCGAGGCTGTGGGGAAGGGGGCA
GCGGTCGGGGATGGGTTTTTGGAGGTTTGCTCTCTCTTCTTCTCTTTCTC
TTCTTTTGTAATTATTTAGTGTATTTGTGTTTGCTGACTATTATTGGGTT
AGGTTGAGGATTTGGAGAAGATGGCGCCGCAGCTTGTGATGGATTTCTAG
ATGGGCTTATGTTTTATATGGGCTAGGATGGAGTTTTACGGATTTGGGTT
TATTCTGATATGGCTTATGATACCAGTGT back to topCoding sequence (CDS) from alignment at ch7:4374109..4375037+ >KJC3_010789-T1 ID=KJC3_010789-T1|Name=KJC3_010789-T1|organism=Aspergillus niger KJC3|type=CDS|length=1302bp|location=Sequence derived from alignment at ch7:4374109..4375037+ (Aspergillus niger KJC3)
ATGCCCCCCGAGCGAAAACCCGCGCAAAAGCGCAGACAACTCCCCTTCAA
ACCACCAAGCCGAACCTCCTCCACCGCCGCCCCAGCATCATCATCATCAA
CCGCCGCAGCAACCACCAGCAAATCCAAAGCCAAACCAGCCGAGAAGCCC
AAAACCAAAGCCACAACTAAACCAACAACCAAACAAGCTCCTAAACCAGC
AAAAGCCTCCTCATCCAAATCCGCACGCCCCCGACCATCATCACCCAGCC
CTGCTGACTCCGAAGAAGACAGCGACAACGATAACGCCTCTTCGTCCTCC
GCCCGCTCGGACGCATCATCGCCGGAACCAGAACCAGAACCGGACTATAT
CCTTGCGGAGATCATTCACAAGGATCAGCCATCTGATGATGTGCTCACGA
ACGATCCTGTCATTCCGCCGAAGTTGTTGACAAGGCTACTGCATCATCAT
TTTCAGAATGAGAAGACCAAGATCGCGAAGGATGCGAATACGGTTGTCGC
AAAGTATGTGGATGTTTTTGTAAGAGAGGCGTTGGCGAGGGCGGCGTTTG
AGAGGAGCGAGGCTGTGGGGAAGGGGGCAGCGGTCGGGGATGGGTTTTTG
GAGGTTGAGGATTTGGAGAAGATGGCGCCGCAGCTTGTGATGGATTTCTA
GATGCCCCCCGAGCGAAAACCCGCGCAAAAGCGCAGACAACTCCCCTTCA
AACCACCAAGCCGAACCTCCTCCACCGCCGCCCCAGCATCATCATCATCA
ACCGCCGCAGCAACCACCAGCAAATCCAAAGCCAAACCAGCCGAGAAGCC
CAAAACCAAAGCCACAACTAAACCAACAACCAAACAAGCTCCTAAACCAG
CAAAAGCCTCCTCATCCAAATCCGCACGCCCCCGACCATCATCACCCAGC
CCTGCTGACTCCGAAGAAGACAGCGACAACGATAACGCCTCTTCGTCCTC
CGCCCGCTCGGACGCATCATCGCCGGAACCAGAACCAGAACCGGACTATA
TCCTTGCGGAGATCATTCACAAGGATCAGCCATCTGATGATGTGCTCACG
AACGATCCTGTCATTCCGCCGAAGTTGTTGACAAGGCTACTGCATCATCA
TTTTCAGAATGAGAAGACCAAGATCGCGAAGGATGCGAATACGGTTGTCG
CAAAGTATGTGGATGTTTTTGTAAGAGAGGCGTTGGCGAGGGCGGCGTTT
GAGAGGAGCGAGGCTGTGGGGAAGGGGGCAGCGGTCGGGGATGGGTTTTT
GGAGGTTGAGGATTTGGAGAAGATGGCGCCGCAGCTTGTGATGGATTTCT
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
| GO:0051382 | kinetochore assembly |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010789-T1.utr5p1 | KJC3_010789-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010789-T1.utr3p1 | KJC3_010789-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018552 |
| DBxref | InterPro:IPR009072 |
| DBxref | PFAM:PF09415 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4374109..4375037 + |
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