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KJC3_010846-T1, KJC3_010846-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010846-T1
Unique NameKJC3_010846-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4510458..4512205+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010846-T1 ID=KJC3_010846-T1|Name=KJC3_010846-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1748bp|location=Sequence derived from alignment at ch7:4510458..4512205+ (Aspergillus niger KJC3)
GAGAGAACATCAGTACTATCGCGTCATTGACGGCATTTAAGGGAGGATGG
CTCGCCCTTCATCATGATATTCTCTATCTCAAGCTCAATTCTGGAATGAG
CATCTCCTTTGTTTTCGGAACATAAGATCTACAACCAGCTTCCAACCGGT
GCTTTCGCAGGTATAGGAAAGATCATCCACGTAATGTTCGGTGCATTTCG
CTGCAACAACAGTACATCTAAGAATCTGGAATTCATTGATTTATCGAGAA
AGGTCGGTATGGATTCTCGGAATTCTGCTGTACTGGTAGGTGATCTATTC
GTTTATATGGACGACATTGGCGATGCTAACATGTGGTCATCAGGCATGTG
AACCCTGCCGAGCTCAAAAGGTCAGTCAGCCAGCAATCAGGCCGTGGGTA
TATTGCTGGACTAACAGTTGTGAAGCTCAAATGCAATGGTGATCTGTATG
GATGCGAAAGATGCCAAGAGTCATCTACCGACTGCACGTATCGCACCCCT
ACGCCCACATCCTCCACGCCTTTGAGCTTGAAACATCCGGCATCAGATCT
TCCGGCACCTCCCATAAAGCGGCGGAGGACAAATGGCGTTGGAGCTCTGC
GTATACATTGTCCGTCGCCAGTTGGACCCAGCCCCAGAATACAGTCACCA
CTCGTGGCGCCCGAGCCAGTCTTCATCAATTCATACCAAGACTGGGGACA
ATTCTGCAACATGAACACAACGGAACACCCAGGGTTGAACTTATCTCTAG
ACGATAATATGCCCTGTTACCCAACGGCGCCTTTGATCTCAGAGGCACAT
CTGAGGCCCTCCCATTTGGTGTCGCCAGCTGCATCACATTCGAGTGAAAG
CGGTCTTAGTGTCTTTGTTCGGAACCCTCATACGCCTGTCACTTCGCAAC
GCCCATTTGAGCATCAGGGCCAACCTTGCAAGTGCATTCAGTCCCTTGCC
GACACGCTGGAGAAGGTTGGAGGTGACAACGACCAAAGGAGTACTATCGA
CCACAGTGAACGTCTTGATTACCTGCTCATGTCTTTGCACACCGGTGTTG
ATACATGTACTCGCGTACTTGACTGCGCCAACTGCGACATCTGTGCCACA
AACTCAATGATCCTAATGGCTTTGATTCAACAGCTTGCCATAAGGTCGAG
TGACCTTTGCGACCTACTGCTCTCGCTCCAGGATAAGCCTCAGAGGACCT
TGCCAGACGACCCAGCAGATCTCGAGCAGGAAGCTAGCGTCTTTATAGGA
AGGTACCAAATACAAATTGAGGCTGTGTGTAGGGAGCTTGTCCACACTTT
AGCCAACATCCACTTCAGAGACCTTCGTCGGCTGCTAGCCCGTCTTGCTG
ATTTGATTGGGAAGAAGCCAAGAGCAAATAAGATGCTTACGGAAGCCACT
GAGACTTCGGAGAAGGCGTCTCACATACTTGAAGGGATTTTGGTCAAGCG
TGCGGCTGACAAGGCAAAGAACCACGAGCTGTACGGCTTGATTACGCAGA
GGGGTCCTTAATGTGTTGCTTACAACTATGTATGGTGAGCAAACATCGTT
TATGGAATTGCGCATAATAGTTTTCTAATGACCTATCTTCATGTCTAGTT
CATTTCAATCCCCGTACTTCCCATTTCTTGACCACCACCAATTGCAAGTT
CTTCCTGGTAATACTATGGGCCAAATTGCACGTTTTCGGAGTCTGGAGTT
CTTGGGGAAACATATTTGGACTGAGCGTTTTGATTGTCAATATAAGCC
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Coding sequence (CDS) from alignment at ch7:4510458..4512205+

>KJC3_010846-T1 ID=KJC3_010846-T1|Name=KJC3_010846-T1|organism=Aspergillus niger KJC3|type=CDS|length=3645bp|location=Sequence derived from alignment at ch7:4510458..4512205+ (Aspergillus niger KJC3)
ATGTTCGGTGCATTTCGCTGCAACAACAGTACATCTAAGAATCTGGAATT
CATTGATTTATCGAGAAAGGTCGGTATGGATTCTCGGAATTCTGCTGTAC
TGGCATGTGAACCCTGCCGAGCTCAAAAGCTCAAATGCAATGGTGATCTG
TATGGATGCGAAAGATGCCAAGAGTCATCTACCGACTGCACGTATCGCAC
CCCTACGCCCACATCCTCCACGCCTTTGAGCTTGAAACATCCGGCATCAG
ATCTTCCGGCACCTCCCATAAAGCGGCGGAGGACAAATGGCGTTGGAGCT
CTGCGTATACATTGTCCGTCGCCAGTTGGACCCAGCCCCAGAATACAGTC
ACCACTCGTGGCGCCCGAGCCAGTCTTCATCAATTCATACCAAGACTGGG
GACAATTCTGCAACATGAACACAACGGAACACCCAGGGTTGAACTTATCT
CTAGACGATAATATGCCCTGTTACCCAACGGCGCCTTTGATCTCAGAGGC
ACATCTGAGGCCCTCCCATTTGGTGTCGCCAGCTGCATCACATTCGAGTG
AAAGCGGTCTTAGTGTCTTTGTTCGGAACCCTCATACGCCTGTCACTTCG
CAACGCCCATTTGAGCATCAGGGCCAACCTTGCAAGTGCATTCAGTCCCT
TGCCGACACGCTGGAGAAGGTTGGAGGTGACAACGACCAAAGGAGTACTA
TCGACCACAGTGAACGTCTTGATTACCTGCTCATGTCTTTGCACACCGGT
GTTGATACATGTACTCGCGTACTTGACTGCGCCAACTGCGACATCTGTGC
CACAAACTCAATGATCCTAATGGCTTTGATTCAACAGCTTGCCATAAGGT
CGAGTGACCTTTGCGACCTACTGCTCTCGCTCCAGGATAAGCCTCAGAGG
ACCTTGCCAGACGACCCAGCAGATCTCGAGCAGGAAGCTAGCGTCTTTAT
AGGAAGGTACCAAATACAAATTGAGGCTGTGTGTAGGGAGCTTGTCCACA
CTTTAGCCAACATCCACTTCAGAGACCTTCGTCGGCTGCTAGCCCGTCTT
GCTGATTTGATTGGGAAGAAGCCAAGAGCAAATAAGATGCTTACGGAAGC
CACTGAGACTTCGGAGAAGGCGTCTCACATACTTGAAGGGATTTTGGTCA
AGCGTGCGGCTGACAAGGCAAAGAACCACGAGCTGTACGGCTTGATTACG
CAGAGGGGTCCTTAAATGTTCGGTGCATTTCGCTGCAACAACAGTACATC
TAAGAATCTGGAATTCATTGATTTATCGAGAAAGGTCGGTATGGATTCTC
GGAATTCTGCTGTACTGGCATGTGAACCCTGCCGAGCTCAAAAGCTCAAA
TGCAATGGTGATCTGTATGGATGCGAAAGATGCCAAGAGTCATCTACCGA
CTGCACGTATCGCACCCCTACGCCCACATCCTCCACGCCTTTGAGCTTGA
AACATCCGGCATCAGATCTTCCGGCACCTCCCATAAAGCGGCGGAGGACA
AATGGCGTTGGAGCTCTGCGTATACATTGTCCGTCGCCAGTTGGACCCAG
CCCCAGAATACAGTCACCACTCGTGGCGCCCGAGCCAGTCTTCATCAATT
CATACCAAGACTGGGGACAATTCTGCAACATGAACACAACGGAACACCCA
GGGTTGAACTTATCTCTAGACGATAATATGCCCTGTTACCCAACGGCGCC
TTTGATCTCAGAGGCACATCTGAGGCCCTCCCATTTGGTGTCGCCAGCTG
CATCACATTCGAGTGAAAGCGGTCTTAGTGTCTTTGTTCGGAACCCTCAT
ACGCCTGTCACTTCGCAACGCCCATTTGAGCATCAGGGCCAACCTTGCAA
GTGCATTCAGTCCCTTGCCGACACGCTGGAGAAGGTTGGAGGTGACAACG
ACCAAAGGAGTACTATCGACCACAGTGAACGTCTTGATTACCTGCTCATG
TCTTTGCACACCGGTGTTGATACATGTACTCGCGTACTTGACTGCGCCAA
CTGCGACATCTGTGCCACAAACTCAATGATCCTAATGGCTTTGATTCAAC
AGCTTGCCATAAGGTCGAGTGACCTTTGCGACCTACTGCTCTCGCTCCAG
GATAAGCCTCAGAGGACCTTGCCAGACGACCCAGCAGATCTCGAGCAGGA
AGCTAGCGTCTTTATAGGAAGGTACCAAATACAAATTGAGGCTGTGTGTA
GGGAGCTTGTCCACACTTTAGCCAACATCCACTTCAGAGACCTTCGTCGG
CTGCTAGCCCGTCTTGCTGATTTGATTGGGAAGAAGCCAAGAGCAAATAA
GATGCTTACGGAAGCCACTGAGACTTCGGAGAAGGCGTCTCACATACTTG
AAGGGATTTTGGTCAAGCGTGCGGCTGACAAGGCAAAGAACCACGAGCTG
TACGGCTTGATTACGCAGAGGGGTCCTTAAATGTTCGGTGCATTTCGCTG
CAACAACAGTACATCTAAGAATCTGGAATTCATTGATTTATCGAGAAAGG
TCGGTATGGATTCTCGGAATTCTGCTGTACTGGCATGTGAACCCTGCCGA
GCTCAAAAGCTCAAATGCAATGGTGATCTGTATGGATGCGAAAGATGCCA
AGAGTCATCTACCGACTGCACGTATCGCACCCCTACGCCCACATCCTCCA
CGCCTTTGAGCTTGAAACATCCGGCATCAGATCTTCCGGCACCTCCCATA
AAGCGGCGGAGGACAAATGGCGTTGGAGCTCTGCGTATACATTGTCCGTC
GCCAGTTGGACCCAGCCCCAGAATACAGTCACCACTCGTGGCGCCCGAGC
CAGTCTTCATCAATTCATACCAAGACTGGGGACAATTCTGCAACATGAAC
ACAACGGAACACCCAGGGTTGAACTTATCTCTAGACGATAATATGCCCTG
TTACCCAACGGCGCCTTTGATCTCAGAGGCACATCTGAGGCCCTCCCATT
TGGTGTCGCCAGCTGCATCACATTCGAGTGAAAGCGGTCTTAGTGTCTTT
GTTCGGAACCCTCATACGCCTGTCACTTCGCAACGCCCATTTGAGCATCA
GGGCCAACCTTGCAAGTGCATTCAGTCCCTTGCCGACACGCTGGAGAAGG
TTGGAGGTGACAACGACCAAAGGAGTACTATCGACCACAGTGAACGTCTT
GATTACCTGCTCATGTCTTTGCACACCGGTGTTGATACATGTACTCGCGT
ACTTGACTGCGCCAACTGCGACATCTGTGCCACAAACTCAATGATCCTAA
TGGCTTTGATTCAACAGCTTGCCATAAGGTCGAGTGACCTTTGCGACCTA
CTGCTCTCGCTCCAGGATAAGCCTCAGAGGACCTTGCCAGACGACCCAGC
AGATCTCGAGCAGGAAGCTAGCGTCTTTATAGGAAGGTACCAAATACAAA
TTGAGGCTGTGTGTAGGGAGCTTGTCCACACTTTAGCCAACATCCACTTC
AGAGACCTTCGTCGGCTGCTAGCCCGTCTTGCTGATTTGATTGGGAAGAA
GCCAAGAGCAAATAAGATGCTTACGGAAGCCACTGAGACTTCGGAGAAGG
CGTCTCACATACTTGAAGGGATTTTGGTCAAGCGTGCGGCTGACAAGGCA
AAGAACCACGAGCTGTACGGCTTGATTACGCAGAGGGGTCCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010846KJC3_010846Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010846-T1KJC3_010846-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010846-T1.utr5p1KJC3_010846-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010846-T1.exon1KJC3_010846-T1.exon1Aspergillus niger KJC3exon
KJC3_010846-T1.exon2KJC3_010846-T1.exon2Aspergillus niger KJC3exon
KJC3_010846-T1.exon3KJC3_010846-T1.exon3Aspergillus niger KJC3exon
KJC3_010846-T1.exon4KJC3_010846-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010846-T1.cdsKJC3_010846-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010846-T1.utr3p1KJC3_010846-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_010846-T1.utr3p2KJC3_010846-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4510458..4512205 +
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